FFCP PHASE1:Hg19::chr12:106641692..106641704,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10970 | |EntrezGene=10970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16991 | |HGNC=16991 | ||
|TSSclassifier=strong | |||
|UniProt=Q07065 | |UniProt=Q07065 | ||
|association_with_transcript=8bp_to_NM_006825,uc001tlk.2_5end | |association_with_transcript=8bp_to_NM_006825,uc001tlk.2_5end | ||
|cluster_id=chr12:106641692..106641704,- | |||
|description=CAGE_peak_2_at_CKAP4_5end | |description=CAGE_peak_2_at_CKAP4_5end | ||
|id=chr12:106641692..106641704,- | |id=chr12:106641692..106641704,- | ||
|ontology_enrichment_celltype=CL:0000055!1.01e-29!180;CL:0000680!5.81e-22!57;CL:0000056!5.81e-22!57;CL:0000355!5.81e-22!57;CL:0000183!2.13e-20!59;CL:0000187!2.36e-20!54;CL:0000393!7.91e-18!60;CL:0000211!7.91e-18!60;CL:0000222!2.35e-17!119;CL:0000057!3.19e-17!75;CL:0000192!1.61e-16!42;CL:0000514!1.61e-16!42;CL:0000048!2.24e-16!430;CL:0000144!4.60e-16!625;CL:0000723!7.25e-16!436;CL:0002371!2.31e-15!591;CL:0000359!7.68e-15!32;CL:0000034!2.07e-14!444;CL:0000548!1.28e-12!679;CL:0000004!1.28e-12!679;CL:0000255!1.28e-12!679;CL:0000012!4.92e-12!682;CL:0002334!1.05e-08!12;CL:0002494!1.04e-07!16;CL:0000220!4.16e-07!246;CL:0002321!7.79e-07!248 | |ontology_enrichment_celltype=CL:0000055!1.01e-29!180;CL:0000680!5.81e-22!57;CL:0000056!5.81e-22!57;CL:0000355!5.81e-22!57;CL:0000183!2.13e-20!59;CL:0000187!2.36e-20!54;CL:0000393!7.91e-18!60;CL:0000211!7.91e-18!60;CL:0000222!2.35e-17!119;CL:0000057!3.19e-17!75;CL:0000192!1.61e-16!42;CL:0000514!1.61e-16!42;CL:0000048!2.24e-16!430;CL:0000144!4.60e-16!625;CL:0000723!7.25e-16!436;CL:0002371!2.31e-15!591;CL:0000359!7.68e-15!32;CL:0000034!2.07e-14!444;CL:0000548!1.28e-12!679;CL:0000004!1.28e-12!679;CL:0000255!1.28e-12!679;CL:0000012!4.92e-12!682;CL:0002334!1.05e-08!12;CL:0002494!1.04e-07!16;CL:0000220!4.16e-07!246;CL:0002321!7.79e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.54e-15;32!CL:0000192;6.28e-13;43!CL:0000187;4.35e-12;55!CL:0000393;4.91e-10;61!CL:0000211;4.91e-10;61!CL:0002334;1.76e-09;12!CL:0002494;1.80e-08;16!CL:0000057;3.30e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,5.44e-24,58;CL:0000056,5.44e-24,58;CL:0000355,5.44e-24,58;CL:0000048,7.26e-24,427;CL:0000723,7.56e-23,433;CL:0000187,3.21e-22,55;CL:0000034,1.21e-20,441;CL:0000222,9.21e-19,121;CL:0000393,9.43e-19,61;CL:0000211,9.43e-19,61;CL:0000057,2.37e-18,76;CL:0000192,5.65e-18,43;CL:0000514,5.65e-18,43;CL:0000359,3.27e-16,32;CL:0002334,1.91e-09,12;CL:0002320,4.76e-09,361;CL:0002494,2.39e-08,16;CL:0000134,5.13e-08,354 | |||
|ontology_enrichment_development_v019=CL:0000514;6.28e-13;43!CL:0000355;1.61e-12;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.36e-22!83;UBERON:0002329!1.36e-22!83;UBERON:0003077!1.36e-22!83;UBERON:0003059!1.36e-22!83;UBERON:0007282!1.36e-22!83;UBERON:0009618!1.36e-22!83;UBERON:0007285!1.36e-22!83;UBERON:0000486!3.37e-22!82;UBERON:0001134!9.13e-22!61;UBERON:0002036!9.13e-22!61;UBERON:0003082!9.13e-22!61;UBERON:0004290!1.46e-21!70;UBERON:0002385!7.43e-21!63;UBERON:0001015!7.43e-21!63;UBERON:0000383!7.43e-21!63;UBERON:0001637!2.05e-16!42;UBERON:0003509!2.05e-16!42;UBERON:0004572!2.05e-16!42;UBERON:0004872!2.74e-16!84;UBERON:0002049!4.24e-16!79;UBERON:0007798!4.24e-16!79;UBERON:0004535!1.78e-15!110;UBERON:0002204!2.13e-15!167;UBERON:0000055!2.32e-15!69;UBERON:0001009!2.48e-15!113;UBERON:0001981!1.03e-14!60;UBERON:0007500!1.03e-14!60;UBERON:0004537!1.03e-14!60;UBERON:0006965!1.03e-14!60;UBERON:0004573!1.28e-13!33;UBERON:0004571!1.28e-13!33;UBERON:0005256!1.32e-13!143;UBERON:0000490!1.64e-11!138;UBERON:0003914!6.95e-11!118;UBERON:0000926!9.22e-11!448;UBERON:0004120!9.22e-11!448;UBERON:0006603!9.22e-11!448;UBERON:0002100!3.26e-09!216;UBERON:0000468!7.90e-08!659;UBERON:0000948!1.07e-07!24;UBERON:0005498!1.07e-07!24;UBERON:0004140!1.07e-07!24;UBERON:0009881!1.07e-07!24;UBERON:0004141!1.07e-07!24;UBERON:0003084!1.07e-07!24;UBERON:0007005!1.07e-07!24;UBERON:0004139!1.07e-07!24;UBERON:0004291!1.07e-07!24;UBERON:0007100!2.97e-07!27;UBERON:0000947!3.62e-07!21;UBERON:0010191!3.62e-07!21;UBERON:0003081!3.91e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.90e-12;33!UBERON:0004571;2.90e-12;33!UBERON:0001637;6.49e-12;42!UBERON:0003509;6.49e-12;42!UBERON:0004572;6.49e-12;42!UBERON:0002385;9.15e-10;31!UBERON:0001015;9.15e-10;31!UBERON:0000383;9.15e-10;31!UBERON:0007500;5.62e-08;56!UBERON:0001981;5.62e-08;56!UBERON:0004537;5.62e-08;56!UBERON:0002204;3.08e-07;70!UBERON:0000948;4.23e-07;22!UBERON:0001013;5.52e-07;14!UBERON:0000055;8.06e-07;65!UBERON:0000947;8.56e-07;21!UBERON:0010191;8.56e-07;21 | |||
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| ||
|short_description=p2@CKAP4 | |short_description=p2@CKAP4 | ||
}} | }} |
Latest revision as of 02:25, 16 September 2015
Short description: | p2@CKAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CKAP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_NM_006825, uc001tlk.2_5end |
EntrezGene: | CKAP4 |
HGNC: | 16991 |
UniProt: | Q07065 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 5.44e-24 | 58 |
myoblast | 5.44e-24 | 58 |
multi-potent skeletal muscle stem cell | 5.44e-24 | 58 |
multi fate stem cell | 7.26e-24 | 427 |
somatic stem cell | 7.56e-23 | 433 |
muscle cell | 3.21e-22 | 55 |
stem cell | 1.21e-20 | 441 |
mesodermal cell | 9.21e-19 | 121 |
electrically responsive cell | 9.43e-19 | 61 |
electrically active cell | 9.43e-19 | 61 |
fibroblast | 2.37e-18 | 76 |
smooth muscle cell | 5.65e-18 | 43 |
smooth muscle myoblast | 5.65e-18 | 43 |
vascular associated smooth muscle cell | 3.27e-16 | 32 |
preadipocyte | 1.91e-09 | 12 |
connective tissue cell | 4.76e-09 | 361 |
cardiocyte | 2.39e-08 | 16 |
mesenchymal cell | 5.13e-08 | 354 |