FFCP PHASE1:Hg19::chr12:106641713..106641725,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10970 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16991 | |||
|TSSclassifier=strong | |||
|UniProt=Q07065 | |||
|association_with_transcript=0bp_to_NM_006825,uc001tlk.2_5end | |||
|cluster_id=chr12:106641713..106641725,- | |||
|coexpression_cluster_id=C2181 | |||
|description=CAGE_peak_4_at_CKAP4_5end | |||
|id=chr12:106641713..106641725,- | |||
|ontology_enrichment_celltype=CL:0000055!5.23e-29!180;CL:0000222!6.15e-23!119;CL:0002371!2.08e-20!591;CL:0000680!2.69e-20!57;CL:0000056!2.69e-20!57;CL:0000355!2.69e-20!57;CL:0000183!3.48e-20!59;CL:0000144!1.26e-19!625;CL:0000187!3.81e-19!54;CL:0000192!5.55e-18!42;CL:0000514!5.55e-18!42;CL:0000057!2.10e-17!75;CL:0000548!2.72e-16!679;CL:0000004!2.72e-16!679;CL:0000255!2.72e-16!679;CL:0000359!8.39e-16!32;CL:0000012!1.98e-15!682;CL:0000393!4.24e-15!60;CL:0000211!4.24e-15!60;CL:0000048!2.16e-14!430;CL:0000723!1.07e-13!436;CL:0000034!4.70e-12!444;CL:0000220!2.00e-10!246;CL:0002321!6.26e-10!248;CL:0002494!1.32e-08!16;CL:0002620!6.45e-08!23;CL:0000003!1.31e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.38e-17;32!CL:0000192;4.20e-14;43!CL:0000187;1.52e-11;55!CL:0002494;6.18e-10;16!CL:0000393;4.05e-09;61!CL:0000211;4.05e-09;61!CL:0002620;8.17e-09;23!CL:0000134;2.15e-08;55!CL:0000048;2.72e-07;58!CL:0000723;2.82e-07;61!CL:0000057;3.58e-07;73!CL:0002334;7.00e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.79e-25,427;CL:0000723,3.16e-24,433;CL:0000222,3.39e-23,121;CL:0000680,5.69e-23,58;CL:0000056,5.69e-23,58;CL:0000355,5.69e-23,58;CL:0000034,3.69e-22,441;CL:0000187,1.23e-21,55;CL:0000192,3.23e-20,43;CL:0000514,3.23e-20,43;CL:0000057,2.33e-19,76;CL:0000359,4.48e-18,32;CL:0000393,8.97e-18,61;CL:0000211,8.97e-18,61;CL:0002494,9.89e-10,16;CL:0002320,1.33e-09,361;CL:0000134,4.70e-09,354;CL:0002620,6.22e-09,23;CL:0002321,8.29e-09,250;CL:0002334,8.78e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;4.20e-14;43!CL:0000355;1.10e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;4.96e-07;14 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.29e-21!83;UBERON:0002329!1.29e-21!83;UBERON:0003077!1.29e-21!83;UBERON:0003059!1.29e-21!83;UBERON:0007282!1.29e-21!83;UBERON:0009618!1.29e-21!83;UBERON:0007285!1.29e-21!83;UBERON:0004872!2.02e-20!84;UBERON:0000486!3.37e-20!82;UBERON:0002049!3.81e-20!79;UBERON:0007798!3.81e-20!79;UBERON:0004290!4.44e-20!70;UBERON:0000055!1.16e-19!69;UBERON:0004535!1.33e-19!110;UBERON:0001009!1.73e-19!113;UBERON:0003914!9.50e-19!118;UBERON:0001637!1.35e-18!42;UBERON:0003509!1.35e-18!42;UBERON:0004572!1.35e-18!42;UBERON:0001981!1.53e-18!60;UBERON:0007500!1.53e-18!60;UBERON:0004537!1.53e-18!60;UBERON:0006965!1.53e-18!60;UBERON:0001134!3.01e-18!61;UBERON:0002036!3.01e-18!61;UBERON:0003082!3.01e-18!61;UBERON:0005256!3.45e-18!143;UBERON:0002385!1.12e-17!63;UBERON:0001015!1.12e-17!63;UBERON:0000383!1.12e-17!63;UBERON:0000490!4.26e-16!138;UBERON:0000926!8.23e-16!448;UBERON:0004120!8.23e-16!448;UBERON:0006603!8.23e-16!448;UBERON:0004573!2.56e-15!33;UBERON:0004571!2.56e-15!33;UBERON:0002204!5.26e-13!167;UBERON:0002100!3.46e-12!216;UBERON:0003081!1.09e-11!216;UBERON:0000468!3.94e-11!659;UBERON:0000480!2.40e-10!626;UBERON:0000467!5.12e-10!625;UBERON:0000947!8.24e-09!21;UBERON:0010191!8.24e-09!21;UBERON:0003104!2.81e-07!238;UBERON:0009142!2.81e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;8.65e-16;33!UBERON:0004571;8.65e-16;33!UBERON:0001637;2.48e-15;42!UBERON:0003509;2.48e-15;42!UBERON:0004572;2.48e-15;42!UBERON:0007500;1.22e-11;56!UBERON:0001981;1.22e-11;56!UBERON:0004537;1.22e-11;56!UBERON:0000055;4.99e-10;65!UBERON:0000947;6.04e-10;21!UBERON:0010191;6.04e-10;21!UBERON:0002049;1.53e-09;75!UBERON:0007798;1.53e-09;75!UBERON:0003914;7.96e-08;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,5.04e-25,78;UBERON:0002329,3.25e-23,71;UBERON:0003059,3.25e-23,71;UBERON:0007282,3.25e-23,71;UBERON:0004290,3.25e-23,71;UBERON:0009618,3.25e-23,71;UBERON:0007524,6.39e-23,73;UBERON:0000486,1.13e-22,83;UBERON:0003077,1.77e-22,72;UBERON:0007285,1.77e-22,72;UBERON:0000926,2.43e-22,315;UBERON:0004120,2.43e-22,315;UBERON:0006603,2.43e-22,315;UBERON:0004872,7.32e-22,83;UBERON:0001637,2.57e-21,42;UBERON:0003509,2.57e-21,42;UBERON:0004572,2.57e-21,42;UBERON:0002049,4.39e-21,78;UBERON:0007798,4.39e-21,78;UBERON:0001134,4.41e-21,62;UBERON:0002036,4.41e-21,62;UBERON:0003082,4.41e-21,62;UBERON:0000055,6.50e-21,68;UBERON:0004535,1.13e-20,109;UBERON:0001009,1.45e-20,112;UBERON:0002385,1.98e-20,64;UBERON:0001015,1.98e-20,64;UBERON:0000383,1.98e-20,64;UBERON:0007500,5.58e-20,59;UBERON:0001981,5.58e-20,59;UBERON:0004537,5.58e-20,59;UBERON:0006965,5.58e-20,59;UBERON:0000490,3.46e-19,148;UBERON:0003914,1.11e-17,117;UBERON:0005256,1.45e-17,122;UBERON:0004573,1.63e-17,33;UBERON:0004571,1.63e-17,33;UBERON:0002204,3.01e-15,167;UBERON:0003081,9.14e-14,203;UBERON:0003104,5.46e-12,160;UBERON:0009142,5.46e-12,160;UBERON:0000947,5.73e-10,21;UBERON:0010191,5.73e-10,21;UBERON:0002384,7.13e-10,371;UBERON:0002100,9.90e-09,199;UBERON:0000948,4.30e-07,24;UBERON:0005498,4.30e-07,24;UBERON:0004140,4.30e-07,24;UBERON:0009881,4.30e-07,24;UBERON:0004141,4.30e-07,24;UBERON:0003084,4.30e-07,24;UBERON:0007005,4.30e-07,24;UBERON:0004139,4.30e-07,24;UBERON:0004291,4.30e-07,24;UBERON:0002199,6.45e-07,46;UBERON:0002416,6.45e-07,46;UBERON:0007100,7.83e-07,27 | |||
|phase1_expression=2.72517568905835,3.63970890614671,2.96004248601539,13.009528785907,6.70441641640932,11.3404008133048,5.06599756336621,1.26343974685366,1.30592814099919,2.94880723801811,4.18680700783456,1.09220686065086,1.84636884759917,0.990130823680373,3.64537113300707,7.39557661096953,5.42425075221579,2.92124036154949,8.29485757943862,0.984968464614303,5.10001728110633,0.940364164434263,0.572471974262113,0.684372125364421,0.753255837568817,0.0764134057479513,0.0821005894499457,0.0787107813136792,2.36018566109342,1.53531759238885,3.71558695958582,0,2.71085326900425,2.21852406100073,0,0.142169232487422,0,1.10799081706375,3.40925560699241,1.73608696572681,0.223915474239924,0,0.77272670290256,2.4717700592526,0.755751887377619,2.18325655069035,3.0215774797739,4.11167888021826,2.78735733805593,2.3015391385772,1.2808035326455,2.12834006899727,1.72372840368309,0,2.70852973188684,2.63539275359647,1.63743690034707,1.12361742222542,4.28517449319264,1.60464513538047,1.91801137739712,3.29851300186716,2.39356389145958,1.70489900213078,4.64334781805734,2.8369261234557,2.4912889959823,1.7587406567972,2.60741459210101,1.95469960234605,3.63239701580021,1.10483290796269,3.48108626184973,0.422510572623884,0.637812899895131,0.628975936525128,0.898629049171961,1.20141514273205,1.12507910687956,0,0,0,1.75996244461323,0,0,0,0.400395987036012,0,0,0.954053754535364,0,2.34894875748376,0.382273228125229,0,0,0.263384084775077,0.590129310341499,0.786021525498329,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0.383220493601921,0.68725489096526,0.253019692019503,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,2.43806866313962,3.35350429851818,5.62595272111533,8.31310050484502,0.50133791063589,4.34539556882471,0.795285947051099,2.43317435151318,0.472674085820339,2.21729397462564,2.19586964232815,0.785874452986276,1.45718115317017,1.11235332835329,0,0,0,0,0,0,2.58391129576717,5.16140757063675,3.47140501607594,2.26123176769604,11.7459842138774,4.40188867104108,1.8809546988313,2.84258435086262,3.5576626268671,1.67360306382335,2.81980521976403,0.760272105718513,2.68468263302986,2.20597848207521,3.24056779152704,1.3394959242612,2.02076435363553,2.81528701208306,7.66583187329416,2.84779697870439,2.93122790288652,3.9534125230819,7.75560528296651,2.18047026071267,7.9515512271251,3.29239330327907,9.26864265692532,23.8074395221515,7.4480360261655,5.60677600142307,4.2699598291882,6.41335625884616,2.17847724779836,5.52313755485721,6.04809041519797,3.63257826347835,0.576175924479999,1.40592859100278,4.37024107562449,2.85235910772225,1.94283284717341,2.23125547423153,2.75184005425824,2.94946694074722,1.42907919878425,1.47401180774122,0.929932030581889,0,3.70900393917835,3.64064544775211,2.15585442544872,0.673344455816265,1.7516592782075,3.3247693858102,7.02364193409341,8.27517048657353,6.46023653298366,3.74326204428069,15.2481190335533,2.13557388818567,1.90738711043606,21.0063767259082,4.32820622801443,9.27505944164265,7.258557396932,12.1518959213712,6.62571635096151,6.81571190459109,2.48534726334208,1.13152239773168,30.1758153639122,6.44813428656898,5.08681776931463,1.73934767846967,5.18217629122586,0.573609190778008,0.243947412259191,0,0.232387885739037,0.518305275076852,0.252320850875628,0.36497735907583,4.69348596989448,5.78916844373597,1.38134921352481,3.25057549622385,3.60939740834793,1.0647612003586,1.01150814046861,0.482022059766964,0.772057809126758,0.435758888184812,0.474541238222193,1.21348177344148,0.392442930250692,0.769494313892781,2.95262181849859,14.0241773803446,5.3504621473082,4.41026134156626,0,0,1.18157981336281,0,0.245976877086227,4.11762744716461,1.42675371031213,1.1240175325762,0.502644862058154,0.555530670951178,2.28065813717227,6.23960871167747,5.77325368101093,2.08674728955138,8.45342598497916,1.73239737313289,2.31492756288305,0.761016608938393,0.790204397959275,0.858486162094873,0,0.468008530278475,0.891786973732369,1.87467667973554,2.51973192298289,0.992425680696705,0.626909658919938,0.290633938513962,0.383382679165211,0,0.352193736052904,3.93923419527467,0.144119953416961,0.37872730027914,0.126995788584338,0,0,1.71072446022705,0.205654985406647,0.600686115687835,0.571652865261156,1.34557301214433,3.05172048183296,0.51336800074665,3.61960804121778,3.57656445851882,3.381211010224,3.98907174877306,10.4007436911366,2.82928111688356,9.92943924162948,1.8649552531127,1.71573592389777,4.88359444852299,1.64648067356154,1.30294473717494,3.19852753868291,2.37585561880029,5.12446941001296,3.48613383440118,5.79843348855931,0,0,2.10833939483032,5.75099653179798,3.44585807502342,2.85273810081437,5.06734573336527,3.28762116080613,6.62525563987614,0,0.197030760201927,0.215627574859517,0.513372145118994,0,0,1.54657762555539,0.167516265334349,0,8.23907726341901,8.97484377612075,12.8468809165171,1.8403723757871,0.500170521059677,5.42530047399471,4.15941723061614,3.7470087647404,3.31175071571263,2.6942525448324,4.51419149591578,2.27407504055985,2.0694614258501,5.31380478828349,5.899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| |||
|short_description=p4@CKAP4 | |||
}} |
Latest revision as of 02:27, 16 September 2015
Short description: | p4@CKAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CKAP4_5end |
Coexpression cluster: | C2181_Smooth_Fibroblast_leiomyoma_mesenchymal_hepatic_normal_Preadipocyte |
Association with transcript: | 0bp_to_NM_006825, uc001tlk.2_5end |
EntrezGene: | CKAP4 |
HGNC: | 16991 |
UniProt: | Q07065 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 3.79e-25 | 427 |
somatic stem cell | 3.16e-24 | 433 |
mesodermal cell | 3.39e-23 | 121 |
muscle precursor cell | 5.69e-23 | 58 |
myoblast | 5.69e-23 | 58 |
multi-potent skeletal muscle stem cell | 5.69e-23 | 58 |
stem cell | 3.69e-22 | 441 |
muscle cell | 1.23e-21 | 55 |
smooth muscle cell | 3.23e-20 | 43 |
smooth muscle myoblast | 3.23e-20 | 43 |
fibroblast | 2.33e-19 | 76 |
vascular associated smooth muscle cell | 4.48e-18 | 32 |
electrically responsive cell | 8.97e-18 | 61 |
electrically active cell | 8.97e-18 | 61 |
cardiocyte | 9.89e-10 | 16 |
connective tissue cell | 1.33e-09 | 361 |
mesenchymal cell | 4.70e-09 | 354 |
skin fibroblast | 6.22e-09 | 23 |
embryonic cell | 8.29e-09 | 250 |
preadipocyte | 8.78e-07 | 12 |