FFCP PHASE1:Hg19::chr1:22963133..22963149,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:22963133..22963149,+ to FFCP PHASE1:Hg19::chr1:22963133..22963149,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=712 | |EntrezGene=712 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1241 | |HGNC=1241 | ||
|TSSclassifier=strong | |||
|UniProt=P02745 | |UniProt=P02745 | ||
|association_with_transcript=15bp_to_ENST00000339353,NM_015991,uc001bfy.2_5end | |||
|cluster_id=chr1:22963133..22963149,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_2_at_C1QA_5end | |||
|id=chr1:22963133..22963149,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.71e-19!65;CL:0000557!3.45e-19!71;CL:0002194!1.45e-18!63;CL:0000576!1.45e-18!63;CL:0000040!1.45e-18!63;CL:0000559!1.45e-18!63;CL:0000839!8.26e-18!70;CL:0000766!5.97e-17!76;CL:0002057!4.12e-13!42;CL:0000860!1.24e-11!45;CL:0000763!3.35e-08!112;CL:0000049!3.35e-08!112;CL:0002393!2.74e-07!9;CL:0002397!2.74e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000235;6.09e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,6.10e-10,6;CL:0002194,3.84e-08,59;CL:0000576,3.84e-08,59;CL:0000040,3.84e-08,59;CL:0000559,3.84e-08,59;CL:0002009,1.19e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.04e-09;82!UBERON:0004872;2.38e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.66e-73!115;UBERON:0001049!3.35e-28!57;UBERON:0005068!3.35e-28!57;UBERON:0006241!3.35e-28!57;UBERON:0007135!3.35e-28!57;UBERON:0002616!3.37e-22!59;UBERON:0003080!1.96e-21!42;UBERON:0003075!1.47e-20!86;UBERON:0007284!1.47e-20!86;UBERON:0002780!1.88e-20!41;UBERON:0001890!1.88e-20!41;UBERON:0006240!1.88e-20!41;UBERON:0000062!3.10e-20!511;UBERON:0001017!1.23e-19!82;UBERON:0005743!4.39e-19!86;UBERON:0002346!7.10e-19!90;UBERON:0000955!1.24e-18!69;UBERON:0006238!1.24e-18!69;UBERON:0002371!4.17e-16!80;UBERON:0000073!9.70e-16!94;UBERON:0001016!9.70e-16!94;UBERON:0002390!1.26e-15!102;UBERON:0003061!1.26e-15!102;UBERON:0002020!1.36e-15!34;UBERON:0003528!1.36e-15!34;UBERON:0002405!1.94e-15!115;UBERON:0001893!2.32e-15!34;UBERON:0002791!7.92e-15!33;UBERON:0002193!1.80e-14!112;UBERON:0001474!5.70e-14!86;UBERON:0000467!7.71e-14!625;UBERON:0000468!8.53e-14!659;UBERON:0001869!9.65e-14!32;UBERON:0000480!9.81e-14!626;UBERON:0000922!3.98e-13!612;UBERON:0003056!4.20e-13!61;UBERON:0002050!2.27e-12!605;UBERON:0005423!2.27e-12!605;UBERON:0000923!6.14e-12!604;UBERON:0005291!6.14e-12!604;UBERON:0006598!6.14e-12!604;UBERON:0002532!6.14e-12!604;UBERON:0002619!3.37e-11!22;UBERON:0004765!4.48e-11!101;UBERON:0001434!4.48e-11!101;UBERON:0000153!6.67e-11!129;UBERON:0007811!6.67e-11!129;UBERON:0001950!9.73e-10!20;UBERON:0000033!1.37e-09!123;UBERON:0000956!2.92e-09!25;UBERON:0000203!2.92e-09!25;UBERON:0002420!1.29e-08!9;UBERON:0007245!1.29e-08!9;UBERON:0010009!1.29e-08!9;UBERON:0010011!1.29e-08!9;UBERON:0000454!1.29e-08!9;UBERON:0002298!1.37e-08!8;UBERON:0002308!1.40e-08!9;UBERON:0000125!1.40e-08!9;UBERON:0000479!5.37e-08!787;UBERON:0003076!6.57e-08!15;UBERON:0003057!6.57e-08!15;UBERON:0001871!1.26e-07!7;UBERON:0004121!1.75e-07!169;UBERON:0000924!5.72e-07!173;UBERON:0006601!5.72e-07!173;UBERON:0009663!5.95e-07!7;UBERON:0001894!6.91e-07!7;UBERON:0006222!6.91e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.74e-21;114!UBERON:0000073;5.52e-16;53!UBERON:0002616;5.52e-16;53!UBERON:0002780;6.20e-16;41!UBERON:0001890;6.20e-16;41!UBERON:0001893;3.33e-13;34!UBERON:0003528;7.63e-13;34!UBERON:0002020;7.63e-13;34!UBERON:0002791;8.26e-13;32!UBERON:0001869;3.10e-12;32!UBERON:0002619;6.24e-12;22!UBERON:0001950;2.81e-10;20!UBERON:0000956;5.48e-10;25!UBERON:0000203;5.48e-10;25!UBERON:0001017;1.47e-09;75!UBERON:0000955;3.35e-09;68!UBERON:0001016;4.65e-08;83!UBERON:0002420;4.67e-08;9!UBERON:0000125;4.67e-08;9!UBERON:0007245;4.67e-08;9!UBERON:0002308;4.67e-08;9!UBERON:0010009;4.67e-08;9!UBERON:0010011;4.67e-08;9!UBERON:0000454;4.67e-08;9!UBERON:0001894;7.17e-08;7!UBERON:0001871;1.10e-07;6!UBERON:0002298;2.33e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.32e-82,114;UBERON:0001049,1.01e-29,56;UBERON:0005068,1.01e-29,56;UBERON:0006241,1.01e-29,56;UBERON:0007135,1.01e-29,56;UBERON:0000073,9.19e-27,53;UBERON:0002616,9.19e-27,53;UBERON:0001017,1.26e-21,81;UBERON:0002780,1.36e-21,41;UBERON:0001890,1.36e-21,41;UBERON:0003080,1.36e-21,41;UBERON:0006240,1.36e-21,41;UBERON:0003075,1.30e-20,82;UBERON:0007284,1.30e-20,82;UBERON:0000955,5.21e-20,68;UBERON:0006238,5.21e-20,68;UBERON:0002346,5.50e-19,86;UBERON:0001016,4.84e-18,89;UBERON:0011216,1.07e-16,223;UBERON:0003528,5.05e-16,34;UBERON:0002020,5.05e-16,34;UBERON:0001893,9.09e-16,34;UBERON:0002791,2.56e-14,32;UBERON:0010371,4.22e-14,104;UBERON:0010314,5.38e-14,132;UBERON:0001869,6.13e-14,32;UBERON:0003056,1.54e-12,61;UBERON:0002050,3.68e-12,564;UBERON:0000923,5.57e-12,560;UBERON:0010316,5.57e-12,560;UBERON:0005291,5.57e-12,560;UBERON:0006598,5.57e-12,560;UBERON:0010317,5.57e-12,560;UBERON:0002532,5.57e-12,560;UBERON:0002619,6.68e-12,22;UBERON:0000922,7.88e-12,592;UBERON:0005423,9.92e-12,581;UBERON:0001950,3.17e-10,20;UBERON:0000956,5.81e-10,25;UBERON:0000203,5.81e-10,25;UBERON:0000025,2.63e-09,192;UBERON:0003076,3.05e-09,15;UBERON:0003057,3.05e-09,15;UBERON:0004111,6.48e-09,240;UBERON:0004121,1.47e-08,171;UBERON:0000924,1.47e-08,171;UBERON:0006601,1.47e-08,171;UBERON:0002420,4.11e-08,9;UBERON:0007245,4.11e-08,9;UBERON:0010009,4.11e-08,9;UBERON:0010011,4.11e-08,9;UBERON:0000454,4.11e-08,9;UBERON:0000125,4.47e-08,9;UBERON:0002308,4.47e-08,9;UBERON:0001894,8.11e-08,7;UBERON:0006222,8.11e-08,7;UBERON:0000479,9.28e-08,773;UBERON:0001871,1.18e-07,6;UBERON:0002298,2.32e-07,6 | |||
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| ||
|short_description=p2@C1QA | |||
}} | }} |
Latest revision as of 05:52, 16 September 2015
Short description: | p2@C1QA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C1QA_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 15bp_to_ENST00000339353, NM_015991, uc001bfy.2_5end |
EntrezGene: | C1QA |
HGNC: | 1241 |
UniProt: | P02745 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 6.10e-10 | 6 |
monopoietic cell | 3.84e-08 | 59 |
monocyte | 3.84e-08 | 59 |
monoblast | 3.84e-08 | 59 |
promonocyte | 3.84e-08 | 59 |
macrophage dendritic cell progenitor | 1.19e-07 | 61 |