FFCP PHASE1:Hg19::chr12:98897617..98897644,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:98897617..98897644,-
|short_description=p1@LOC643770
|description=CAGE_peak_1_at_LOC643770_5end
|association_with_transcript=0bp_to_ENST00000501499,NR_038...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=643770 | |EntrezGene=643770 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=G3V2P1 | |UniProt=G3V2P1 | ||
|association_with_transcript=0bp_to_ENST00000501499,NR_038383,uc001tff.1_5end | |||
|cluster_id=chr12:98897617..98897644,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_LOC643770_5end | |||
|id=chr12:98897617..98897644,- | |||
|ontology_enrichment_celltype=CL:0000738!1.95e-27!140;CL:0002031!1.34e-26!124;CL:0000037!2.11e-26!172;CL:0000566!2.11e-26!172;CL:0002087!6.06e-25!119;CL:0000988!8.14e-24!182;CL:0002032!1.04e-23!165;CL:0000837!1.04e-23!165;CL:0002057!2.80e-16!42;CL:0000860!2.11e-15!45;CL:0000839!4.52e-13!70;CL:0000838!6.49e-13!52;CL:0002009!1.48e-12!65;CL:0000557!1.64e-12!71;CL:0000542!2.80e-12!53;CL:0000051!2.80e-12!53;CL:0000763!6.67e-12!112;CL:0000049!6.67e-12!112;CL:0002194!7.69e-12!63;CL:0000576!7.69e-12!63;CL:0000040!7.69e-12!63;CL:0000559!7.69e-12!63;CL:0000766!1.77e-11!76;CL:0000791!8.48e-08!18;CL:0000789!8.48e-08!18;CL:0002420!8.48e-08!18;CL:0002419!8.48e-08!18;CL:0000790!8.48e-08!18;CL:0000084!1.26e-07!25;CL:0000827!1.26e-07!25;CL:0002393!2.55e-07!9;CL:0002397!2.55e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.88e-12;18!CL:0000789;1.88e-12;18!CL:0002419;1.88e-12;18!CL:0002087;9.22e-11;104!CL:0002393;3.46e-10;6!CL:0002397;3.46e-10;6!CL:0000624;7.38e-10;6!CL:0000576;9.65e-10;48!CL:0000084;2.31e-09;25!CL:0000766;8.75e-09;69!CL:0000236;1.27e-08;13!CL:0000542;2.10e-08;53!CL:0000860;1.34e-07;33!CL:0002057;1.34e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.39e-27,136;CL:0002031,2.27e-26,120;CL:0002087,7.73e-26,115;CL:0000037,3.85e-22,168;CL:0000988,4.49e-20,177;CL:0002032,8.49e-20,161;CL:0000837,8.49e-20,161;CL:0000860,3.62e-18,42;CL:0002057,3.62e-18,42;CL:0000473,6.27e-15,48;CL:0000234,6.27e-15,48;CL:0002393,7.02e-15,9;CL:0002397,7.02e-15,9;CL:0000838,1.15e-13,52;CL:0000542,2.89e-13,53;CL:0000051,2.89e-13,53;CL:0000791,7.58e-13,18;CL:0000789,7.58e-13,18;CL:0002420,7.58e-13,18;CL:0002419,7.58e-13,18;CL:0000790,7.58e-13,18;CL:0000839,1.74e-12,66;CL:0000557,3.49e-12,67;CL:0002009,5.92e-12,61;CL:0000766,1.12e-11,72;CL:0002194,1.70e-11,59;CL:0000576,1.70e-11,59;CL:0000040,1.70e-11,59;CL:0000559,1.70e-11,59;CL:0000624,2.13e-10,6;CL:0000084,1.69e-09,25;CL:0000827,1.69e-09,25;CL:0000763,2.86e-08,108;CL:0000049,2.86e-08,108;CL:0000236,6.12e-08,14 | |||
|ontology_enrichment_development_v019=CL:0002057;1.36e-12;42!CL:0000790;1.88e-12;18!CL:0000051;2.10e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.32e-13!102;UBERON:0003061!3.32e-13!102;UBERON:0007023!4.90e-12!115;UBERON:0002193!3.53e-11!112;UBERON:0002371!4.52e-11!80;UBERON:0001474!6.09e-09!86;UBERON:0002405!1.08e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.08e-11,98;UBERON:0003061,5.08e-11,98;UBERON:0002371,9.45e-11,76;UBERON:0002193,7.24e-10,108;UBERON:0001474,2.20e-09,82;UBERON:0002405,7.41e-09,93;UBERON:0004765,7.15e-08,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0,0.495065411840187,0,0,0,0,0,0,0,0.313454721478088,0,0.273748850145768,0.251085279189606,0.458480434487708,0.164201178899891,0.314843125254717,1.18009283054671,1.53531759238885,0.619264493264304,0,0,0,0.154934401160603,0.142169232487422,0.587200878669695,4.43196326825502,2.20598892217156,2.17010870715852,0.895661896959697,0,0.77272670290256,0.581592955118259,0.755751887377619,0.485168122375632,0.464858073811369,0.411167888021826,0.619412741790207,1.7261543539329,1.0246428261164,0.945928919554341,1.72372840368309,1.29096936716765,1.35426486594342,1.12945403725563,0.545812300115692,1.57306439111559,1.53041946185451,1.28371610830437,1.27867425159808,1.64925650093358,0.598390972864896,1.27867425159808,0,0,0.622822248995575,0.75374599577023,1.0429658368404,0.868755378820466,0.605399502633369,0.736555271975129,3.16462387440884,2.32380814943136,1.91343869968539,1.25795187305026,1.12328631146495,1.65194582125657,1.28580469357664,1.99508920618874,2.38700012638908,3.83594722905731,1.75996244461323,0.546138611262131,0.889509253863555,2.56038133539904,1.60158394814405,1.14950487990897,0.661044872784862,2.86216126360609,1.1384259382189,2.93618594685469,2.29363936875137,1.32171328579026,0,0.526768169550154,1.96709770113833,3.93010762749165,1.23360899399706,2.17342444007882,3.58514493296949,0.473447805734733,5.84480185223734,1.6711568532776,2.65145316727353,1.10766947291811,2.43723477388514,0.896639238079726,2.21100890851793,0.822189523018381,2.21080014228679,1.44901542867526,1.33457906845854,0.267540828089713,2.09071047609954,1.13309342697566,1.91610246800961,0.68725489096526,1.51811815211702,1.27426165729639,0.651083453856419,1.90090408889675,2.10805166708882,3.07167866770604,0,1.18388626022008,0,1.41124720257313,0.802320587350522,1.44824403882799,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0,0.43917392846563,6.35248516163906,0,0,0,0.174129737299267,0,0.476981248610684,1.14398982156026,0.74291500265913,0,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0.206105058476878,0,0.18611685633159,0,0,0,0,0.323292113637624,0,0.10075209822764,0,0,0,0,1.09776335516636,1.32529768321485,1.39432731443422,0.207322110030741,0.756962552626885,2.55484151353081,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0.392442930250692,0,0.738155454624648,0,0,0,2.53510069643662,0,0,3.97316789473185,0,0,0,0,0,0,0,1.03993478527958,0,0.231860809950154,0,0,0,0.380508304469197,0.790204397959275,0,0.738651018262192,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0.352193736052904,0.414656231081544,1.29707958075265,1.51490920111656,0.126995788584338,0,0,0,0.102827492703324,0,0.571652865261156,0.112131084345361,0,0,0,0,0,0,1.04007436911366,0.257207374262142,0,0.799266537048298,0.142977993658148,0.542621605391443,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0.672510863961164,0.985153801009636,1.2937654491571,1.15508732651774,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0.858840442033979,0.500170521059677,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0,0,0,0.195801157462741,0,0.413536052245775,2.37285620900479,1.38745825144478,0.606255142892519,0,0.604780586659361,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.241718899183244,0,0,0,0,0.131124414959424,0,0,0,0,0.316654886678627,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0,1.53481913652154,0.784306353074702,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0.286822704408103,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0.376575203107117,0,0,0,0,1.52234282769651,0.764637207142375,0.569647187174163,1.19115887728894,1.23408681925858,0,0.540031437238115,0,0.106824071127473,0,0,0,0.721346064882224,0.640276590135727,0.318852545457645,0.399158742865633,0.191505370132367,0.635020748171649,0.649243880549111,0.280797178113459,0.456469358066384,0.156679895773023,0,0.50787533340481,0,0,0,1.71752672377882,0.614481528616916,1.3420566473545,0.333698283423817,0.390776190804081,0.835218521685727,0,0.811367035427949,0,1.4098700508785,0.37428108081644,0.73254089635947,2.06312886974173,0.445773537109913,0.284136146806413,0.23874448473769,0.296964680832639,0,0,0.281338832821026,0.222617410045812,0.329607748453519,0.211125408127993,0.597743964753209,1.10513566212459,0,0.306806047506464,0.246169610922139,0,0.0898683511473268,0.179021174675609,0,0.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| ||
|short_description=p1@LOC643770 | |||
}} | }} |
Latest revision as of 06:05, 16 September 2015
Short description: | p1@LOC643770 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC643770_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000501499, NR_038383, uc001tff.1_5end |
EntrezGene: | LOC643770 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.08e-11 | 98 |
blood island | 5.08e-11 | 98 |
bone marrow | 9.45e-11 | 76 |
hemolymphoid system | 7.24e-10 | 108 |
bone element | 2.20e-09 | 82 |
immune system | 7.41e-09 | 93 |
skeletal element | 7.15e-08 | 90 |