FFCP PHASE1:Hg19::chr20:42839378..42839477,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:42839378..42839477,- to FFCP PHASE1:Hg19::chr20:42839378..42839477,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51526 | |EntrezGene=51526 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16105 | |HGNC=16105 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NX31 | |UniProt=Q9NX31 | ||
|association_with_transcript=0bp_to_ENST00000255174,uc002xlk.2_5end | |||
|cluster_id=chr20:42839378..42839477,- | |||
|coexpression_cluster_id=C175 | |||
|description=CAGE_peak_1_at_C20orf111_5end | |||
|id=chr20:42839378..42839477,- | |||
|ontology_enrichment_celltype=CL:0000738!4.84e-29!140;CL:0002057!2.17e-22!42;CL:0002031!9.96e-22!124;CL:0002087!1.01e-21!119;CL:0000860!1.44e-21!45;CL:0000766!8.48e-21!76;CL:0002009!5.28e-18!65;CL:0000557!1.94e-17!71;CL:0002194!4.73e-17!63;CL:0000576!4.73e-17!63;CL:0000040!4.73e-17!63;CL:0000559!4.73e-17!63;CL:0000839!6.31e-17!70;CL:0000037!8.59e-14!172;CL:0000566!8.59e-14!172;CL:0002032!1.82e-11!165;CL:0000837!1.82e-11!165;CL:0000988!2.85e-10!182;CL:0000791!3.17e-07!18;CL:0000789!3.17e-07!18;CL:0002420!3.17e-07!18;CL:0002419!3.17e-07!18;CL:0000790!3.17e-07!18;CL:0000763!4.18e-07!112;CL:0000049!4.18e-07!112;CL:0000094!8.21e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.85e-16;33!CL:0002057;1.85e-16;33!CL:0000576;6.94e-13;48!CL:0000473;4.44e-12;39!CL:0000234;4.44e-12;39!CL:0000766;2.95e-10;69!CL:0002087;8.76e-08;104!CL:0000791;2.99e-07;18!CL:0000789;2.99e-07;18!CL:0002419;2.99e-07;18!CL:0000094;8.17e-07;8!CL:0000738;9.96e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.88e-30,136;CL:0002087,1.50e-22,115;CL:0002031,1.59e-22,120;CL:0000860,2.17e-22,42;CL:0002057,2.17e-22,42;CL:0000766,4.84e-22,72;CL:0000473,9.85e-20,48;CL:0000234,9.85e-20,48;CL:0002009,2.87e-19,61;CL:0000557,1.46e-18,67;CL:0002194,2.74e-18,59;CL:0000576,2.74e-18,59;CL:0000040,2.74e-18,59;CL:0000559,2.74e-18,59;CL:0000839,4.93e-18,66;CL:0000037,3.55e-14,168;CL:0002032,8.34e-12,161;CL:0000837,8.34e-12,161;CL:0000988,6.71e-11,177;CL:0000763,2.05e-07,108;CL:0000049,2.05e-07,108;CL:0000791,3.17e-07,18;CL:0000789,3.17e-07,18;CL:0002420,3.17e-07,18;CL:0002419,3.17e-07,18;CL:0000790,3.17e-07,18;CL:0000094,8.21e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.96e-16;42!CL:0000790;2.99e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.55e-18!102;UBERON:0003061!8.55e-18!102;UBERON:0002193!7.39e-16!112;UBERON:0002371!1.36e-14!80;UBERON:0001474!3.94e-14!86;UBERON:0004765!1.24e-12!101;UBERON:0001434!1.24e-12!101;UBERON:0002405!1.70e-10!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.35e-18,98;UBERON:0003061,1.35e-18,98;UBERON:0002193,1.62e-16,108;UBERON:0002371,1.94e-15,76;UBERON:0001474,6.80e-15,82;UBERON:0004765,2.46e-14,90;UBERON:0002405,9.07e-14,93;UBERON:0001434,2.94e-13,100 | |||
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| ||
|short_description=p1@C20orf111 | |||
}} | }} |
Latest revision as of 07:41, 16 September 2015
Short description: | p1@C20orf111 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C20orf111_5end |
Coexpression cluster: | C175_Eosinophils_Neutrophils_CD4_Basophils_CD19_CD8_Natural |
Association with transcript: | 0bp_to_ENST00000255174, uc002xlk.2_5end |
EntrezGene: | C20orf111 |
HGNC: | 16105 |
UniProt: | Q9NX31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.88e-30 | 136 |
nongranular leukocyte | 1.50e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.59e-22 | 120 |
classical monocyte | 2.17e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.17e-22 | 42 |
myeloid leukocyte | 4.84e-22 | 72 |
defensive cell | 9.85e-20 | 48 |
phagocyte | 9.85e-20 | 48 |
macrophage dendritic cell progenitor | 2.87e-19 | 61 |
granulocyte monocyte progenitor cell | 1.46e-18 | 67 |
monopoietic cell | 2.74e-18 | 59 |
monocyte | 2.74e-18 | 59 |
monoblast | 2.74e-18 | 59 |
promonocyte | 2.74e-18 | 59 |
myeloid lineage restricted progenitor cell | 4.93e-18 | 66 |
hematopoietic stem cell | 3.55e-14 | 168 |
hematopoietic oligopotent progenitor cell | 8.34e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.34e-12 | 161 |
hematopoietic cell | 6.71e-11 | 177 |
myeloid cell | 2.05e-07 | 108 |
common myeloid progenitor | 2.05e-07 | 108 |
mature alpha-beta T cell | 3.17e-07 | 18 |
alpha-beta T cell | 3.17e-07 | 18 |
immature T cell | 3.17e-07 | 18 |
mature T cell | 3.17e-07 | 18 |
immature alpha-beta T cell | 3.17e-07 | 18 |
granulocyte | 8.21e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.35e-18 | 98 |
blood island | 1.35e-18 | 98 |
hemolymphoid system | 1.62e-16 | 108 |
bone marrow | 1.94e-15 | 76 |
bone element | 6.80e-15 | 82 |
skeletal element | 2.46e-14 | 90 |
immune system | 9.07e-14 | 93 |
skeletal system | 2.94e-13 | 100 |