FFCP PHASE1:Hg19::chr4:160203650..160203699,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:160203650..160203699,+ to FFCP PHASE1:Hg19::chr4:160203650..160203699,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9693 | |EntrezGene=9693 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16854 | |HGNC=16854 | ||
|TSSclassifier=strong | |||
|UniProt=D6RC78 | |UniProt=D6RC78 | ||
|association_with_transcript=0bp_to_ENST00000514565_5end | |||
|cluster_id=chr4:160203650..160203699,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_6_at_RAPGEF2_5end | |||
|id=chr4:160203650..160203699,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.73e-16;82!UBERON:0010122;8.00e-13;2!UBERON:0006222;8.92e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.61e-67!57;UBERON:0005068!7.61e-67!57;UBERON:0006241!7.61e-67!57;UBERON:0007135!7.61e-67!57;UBERON:0005743!1.80e-58!86;UBERON:0002616!7.73e-58!59;UBERON:0001017!5.91e-57!82;UBERON:0002780!2.69e-56!41;UBERON:0001890!2.69e-56!41;UBERON:0006240!2.69e-56!41;UBERON:0000955!2.84e-55!69;UBERON:0006238!2.84e-55!69;UBERON:0003080!9.66e-55!42;UBERON:0001869!3.37e-53!32;UBERON:0001893!3.40e-53!34;UBERON:0002020!5.88e-53!34;UBERON:0003528!5.88e-53!34;UBERON:0000073!1.18e-51!94;UBERON:0001016!1.18e-51!94;UBERON:0003075!3.72e-51!86;UBERON:0007284!3.72e-51!86;UBERON:0002791!5.83e-51!33;UBERON:0002346!2.78e-48!90;UBERON:0002619!8.40e-44!22;UBERON:0000956!2.28e-41!25;UBERON:0000203!2.28e-41!25;UBERON:0001950!1.00e-39!20;UBERON:0003056!2.80e-39!61;UBERON:0007023!1.69e-37!115;UBERON:0000033!3.27e-30!123;UBERON:0000153!3.31e-28!129;UBERON:0007811!3.31e-28!129;UBERON:0004121!6.50e-24!169;UBERON:0000924!4.82e-23!173;UBERON:0006601!4.82e-23!173;UBERON:0000025!3.70e-17!194;UBERON:0000200!1.80e-15!6;UBERON:0001871!3.86e-15!7;UBERON:0002420!1.54e-13!9;UBERON:0007245!1.54e-13!9;UBERON:0010009!1.54e-13!9;UBERON:0010011!1.54e-13!9;UBERON:0000454!1.54e-13!9;UBERON:0003076!4.09e-13!15;UBERON:0003057!4.09e-13!15;UBERON:0002308!7.33e-13!9;UBERON:0000125!7.33e-13!9;UBERON:0002021!9.81e-13!5;UBERON:0000349!1.37e-12!5;UBERON:0004111!5.15e-12!241;UBERON:0000369!5.20e-11!4;UBERON:0002435!5.20e-11!4;UBERON:0000204!5.20e-11!4;UBERON:0010082!5.20e-11!4;UBERON:0004733!1.01e-10!12;UBERON:0002028!1.01e-10!12;UBERON:0007277!1.01e-10!12;UBERON:0004732!8.76e-10!13;UBERON:0009663!2.76e-09!7;UBERON:0000477!8.41e-09!286;UBERON:0000483!8.68e-09!309;UBERON:0002680!1.10e-08!9;UBERON:0001895!1.10e-08!9;UBERON:0010092!1.10e-08!9;UBERON:0002771!1.11e-08!3;UBERON:0005383!1.11e-08!3;UBERON:0005382!1.11e-08!3;UBERON:0000119!1.40e-08!312;UBERON:0001872!1.56e-08!5;UBERON:0000064!2.06e-07!219;UBERON:0000988!2.58e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.27e-87;32!UBERON:0001950;5.81e-86;20!UBERON:0001893;2.12e-82;34!UBERON:0002791;9.86e-81;32!UBERON:0002619;3.71e-78;22!UBERON:0003528;9.85e-74;34!UBERON:0002020;9.85e-74;34!UBERON:0000956;1.06e-68;25!UBERON:0000203;1.06e-68;25!UBERON:0002780;8.14e-56;41!UBERON:0001890;8.14e-56;41!UBERON:0000073;4.15e-35;53!UBERON:0002616;4.15e-35;53!UBERON:0000200;6.17e-35;6!UBERON:0002420;1.96e-31;9!UBERON:0007245;1.96e-31;9!UBERON:0010009;1.96e-31;9!UBERON:0010011;1.96e-31;9!UBERON:0000454;1.96e-31;9!UBERON:0000955;2.12e-30;68!UBERON:0001871;2.49e-29;6!UBERON:0001017;2.89e-29;75!UBERON:0000369;2.87e-24;4!UBERON:0002435;2.87e-24;4!UBERON:0000204;2.87e-24;4!UBERON:0009663;3.91e-21;7!UBERON:0001016;1.31e-20;83!UBERON:0002021;2.91e-19;5!UBERON:0001872;8.65e-19;5!UBERON:0005383;1.16e-18;3!UBERON:0005382;1.16e-18;3!UBERON:0001870;1.47e-18;3!UBERON:0000125;2.14e-16;9!UBERON:0002308;2.14e-16;9!UBERON:0002702;4.29e-13;2!UBERON:0002771;5.29e-13;2!UBERON:0001873;8.00e-13;2!UBERON:0001876;9.00e-13;2!UBERON:0007023;1.01e-11;114!UBERON:0000349;3.04e-11;5!UBERON:0011216;1.24e-08;132!UBERON:0001874;1.46e-07;1!UBERON:0001882;2.44e-07;1!UBERON:0005403;2.44e-07;1!UBERON:0003112;3.01e-07;1!UBERON:0011158;3.01e-07;1!UBERON:0003128;3.01e-07;1!UBERON:0001703;3.01e-07;1!UBERON:0002241;3.01e-07;1!UBERON:0007190;4.18e-07;1!UBERON:0002581;5.78e-07;1!UBERON:0002902;5.78e-07;1!UBERON:0002022;5.78e-07;1!UBERON:0009899;5.78e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,6.20e-97,32;UBERON:0001893,4.07e-91,34;UBERON:0002791,7.73e-89,32;UBERON:0001950,5.83e-86,20;UBERON:0003528,1.72e-83,34;UBERON:0002020,1.72e-83,34;UBERON:0002780,1.73e-81,41;UBERON:0001890,1.73e-81,41;UBERON:0003080,1.73e-81,41;UBERON:0006240,1.73e-81,41;UBERON:0002619,3.71e-78,22;UBERON:0000956,1.06e-68,25;UBERON:0000203,1.06e-68,25;UBERON:0000073,1.41e-67,53;UBERON:0002616,1.41e-67,53;UBERON:0001049,9.54e-64,56;UBERON:0005068,9.54e-64,56;UBERON:0006241,9.54e-64,56;UBERON:0007135,9.54e-64,56;UBERON:0000955,1.33e-59,68;UBERON:0006238,1.33e-59,68;UBERON:0001017,3.37e-57,81;UBERON:0003056,1.45e-53,61;UBERON:0001016,4.73e-51,89;UBERON:0003075,3.91e-42,82;UBERON:0007284,3.91e-42,82;UBERON:0002346,5.92e-40,86;UBERON:0000200,5.49e-35,6;UBERON:0010371,3.39e-32,104;UBERON:0007023,6.55e-32,114;UBERON:0002420,2.06e-31,9;UBERON:0007245,2.06e-31,9;UBERON:0010009,2.06e-31,9;UBERON:0010011,2.06e-31,9;UBERON:0000454,2.06e-31,9;UBERON:0001871,2.68e-29,6;UBERON:0010314,1.64e-26,132;UBERON:0004121,2.75e-24,171;UBERON:0000924,2.75e-24,171;UBERON:0006601,2.75e-24,171;UBERON:0000369,3.14e-24,4;UBERON:0002435,3.14e-24,4;UBERON:0000204,3.14e-24,4;UBERON:0010082,3.14e-24,4;UBERON:0009663,4.43e-21,7;UBERON:0011216,2.87e-20,223;UBERON:0002021,3.51e-19,5;UBERON:0001872,7.72e-19,5;UBERON:0005383,1.23e-18,3;UBERON:0005382,1.23e-18,3;UBERON:0001870,1.31e-18,3;UBERON:0000025,5.61e-18,192;UBERON:0000125,2.36e-16,9;UBERON:0002308,2.36e-16,9;UBERON:0004111,2.86e-13,240;UBERON:0002702,3.93e-13,2;UBERON:0002771,5.29e-13,2;UBERON:0001876,8.00e-13,2;UBERON:0001873,8.49e-13,2;UBERON:0010122,8.49e-13,2;UBERON:0000349,2.88e-11,5;UBERON:0000483,3.39e-09,306;UBERON:0000119,4.73e-09,309;UBERON:0001874,1.46e-07,1;UBERON:0001882,2.52e-07,1;UBERON:0005403,2.52e-07,1;UBERON:0003112,3.01e-07,1;UBERON:0011158,3.01e-07,1;UBERON:0003128,3.01e-07,1;UBERON:0001703,3.01e-07,1;UBERON:0002241,3.01e-07,1;UBERON:0004761,3.01e-07,1;UBERON:0009617,3.01e-07,1;UBERON:0007190,4.06e-07,1;UBERON:0002022,5.45e-07,1;UBERON:0002581,5.78e-07,1;UBERON:0002902,6.49e-07,1;UBERON:0009899,6.49e-07,1 | |||
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|short_description=p6@RAPGEF2 | |||
}} | }} |
Latest revision as of 12:33, 16 September 2015
Short description: | p6@RAPGEF2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RAPGEF2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000514565_5end |
EntrezGene: | RAPGEF2 |
HGNC: | 16854 |
UniProt: | D6RC78 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data