FFCP PHASE1:Hg19::chr1:235813888..235813934,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2786 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4407 | |||
|TSSclassifier=strong | |||
|UniProt=P50150,B1APZ0 | |||
|association_with_transcript=119bp_to_ENST00000366598,ENST00000450593,NM_001098721,NM_004485,uc001hxh.3,uc009xfz.2_5end | |||
|cluster_id=chr1:235813888..235813934,- | |||
|description=CAGE_peak_4_at_GNG4_5end | |||
|id=chr1:235813888..235813934,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002577;4.60e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,5.85e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.99e-10;82!UBERON:0003056;2.04e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.94e-37!57;UBERON:0005068!6.94e-37!57;UBERON:0006241!6.94e-37!57;UBERON:0007135!6.94e-37!57;UBERON:0000073!1.11e-36!94;UBERON:0001016!1.11e-36!94;UBERON:0005743!1.61e-35!86;UBERON:0001017!1.57e-34!82;UBERON:0002616!1.07e-32!59;UBERON:0000955!4.46e-30!69;UBERON:0006238!4.46e-30!69;UBERON:0007023!2.57e-29!115;UBERON:0002780!2.61e-29!41;UBERON:0001890!2.61e-29!41;UBERON:0006240!2.61e-29!41;UBERON:0003075!1.49e-28!86;UBERON:0007284!1.49e-28!86;UBERON:0003080!2.94e-28!42;UBERON:0002346!2.04e-27!90;UBERON:0002020!4.16e-25!34;UBERON:0003528!4.16e-25!34;UBERON:0001893!6.86e-25!34;UBERON:0002791!4.72e-24!33;UBERON:0001869!1.43e-23!32;UBERON:0003056!1.35e-20!61;UBERON:0004121!2.34e-19!169;UBERON:0000924!5.38e-19!173;UBERON:0006601!5.38e-19!173;UBERON:0000956!7.42e-18!25;UBERON:0000203!7.42e-18!25;UBERON:0002619!9.67e-17!22;UBERON:0000153!2.56e-15!129;UBERON:0007811!2.56e-15!129;UBERON:0001950!2.72e-15!20;UBERON:0000033!4.49e-15!123;UBERON:0000064!9.57e-13!219;UBERON:0000062!5.29e-11!511;UBERON:0003076!1.24e-09!15;UBERON:0003057!1.24e-09!15;UBERON:0000922!6.77e-09!612;UBERON:0000475!7.23e-09!365;UBERON:0002308!9.38e-09!9;UBERON:0000125!9.38e-09!9;UBERON:0004732!2.52e-08!13;UBERON:0000025!3.02e-08!194;UBERON:0002420!3.49e-08!9;UBERON:0007245!3.49e-08!9;UBERON:0010009!3.49e-08!9;UBERON:0010011!3.49e-08!9;UBERON:0000454!3.49e-08!9;UBERON:0000481!1.09e-07!347;UBERON:0000468!1.44e-07!659;UBERON:0000160!1.71e-07!27;UBERON:0004733!2.03e-07!12;UBERON:0002028!2.03e-07!12;UBERON:0007277!2.03e-07!12;UBERON:0005409!2.61e-07!35;UBERON:0009663!8.64e-07!7;UBERON:0002050!8.86e-07!605;UBERON:0005423!8.86e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.19e-18;41!UBERON:0001890;2.19e-18;41!UBERON:0000073;1.88e-17;53!UBERON:0002616;1.88e-17;53!UBERON:0001869;4.71e-15;32!UBERON:0001893;7.52e-15;34!UBERON:0003528;1.41e-14;34!UBERON:0002020;1.41e-14;34!UBERON:0002791;1.47e-13;32!UBERON:0000955;1.56e-12;68!UBERON:0000125;3.71e-11;9!UBERON:0002308;3.71e-11;9!UBERON:0001017;4.52e-11;75!UBERON:0002619;7.66e-11;22!UBERON:0001016;2.05e-10;83!UBERON:0001950;3.46e-10;20!UBERON:0003296;3.78e-10;4!UBERON:0010133;3.78e-10;4!UBERON:0004732;4.12e-10;13!UBERON:0002298;8.57e-10;6!UBERON:0001987;1.04e-09;4!UBERON:0000956;2.82e-09;25!UBERON:0000203;2.82e-09;25!UBERON:0007023;3.10e-09;114!UBERON:0004733;1.64e-08;12!UBERON:0002028;1.64e-08;12!UBERON:0001894;2.80e-08;7!UBERON:0001896;9.62e-08;3!UBERON:0005290;9.62e-08;3!UBERON:0009663;1.87e-07;7!UBERON:0002021;3.89e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.63e-33,56;UBERON:0005068,5.63e-33,56;UBERON:0006241,5.63e-33,56;UBERON:0007135,5.63e-33,56;UBERON:0000073,1.15e-30,53;UBERON:0002616,1.15e-30,53;UBERON:0001016,2.47e-27,89;UBERON:0001017,4.73e-26,81;UBERON:0000955,3.43e-25,68;UBERON:0006238,3.43e-25,68;UBERON:0007023,4.28e-25,114;UBERON:0003075,2.17e-24,82;UBERON:0007284,2.17e-24,82;UBERON:0002780,2.42e-23,41;UBERON:0001890,2.42e-23,41;UBERON:0003080,2.42e-23,41;UBERON:0006240,2.42e-23,41;UBERON:0002346,8.51e-23,86;UBERON:0010371,1.93e-18,104;UBERON:0003056,3.35e-18,61;UBERON:0003528,2.78e-17,34;UBERON:0002020,2.78e-17,34;UBERON:0001893,5.05e-17,34;UBERON:0011216,6.24e-17,223;UBERON:0001869,3.12e-16,32;UBERON:0002791,2.48e-14,32;UBERON:0010314,2.48e-13,132;UBERON:0004121,1.21e-12,171;UBERON:0000924,1.21e-12,171;UBERON:0006601,1.21e-12,171;UBERON:0000125,4.52e-11,9;UBERON:0002308,4.52e-11,9;UBERON:0002619,8.43e-11,22;UBERON:0003076,1.03e-10,15;UBERON:0003057,1.03e-10,15;UBERON:0003296,3.03e-10,4;UBERON:0010133,3.03e-10,4;UBERON:0004732,3.59e-10,13;UBERON:0001950,4.03e-10,20;UBERON:0002298,7.46e-10,6;UBERON:0001987,1.27e-09,4;UBERON:0004340,1.27e-09,4;UBERON:0000956,3.06e-09,25;UBERON:0000203,3.06e-09,25;UBERON:0000025,4.89e-09,192;UBERON:0004733,1.60e-08,12;UBERON:0002028,1.60e-08,12;UBERON:0007277,1.60e-08,12;UBERON:0001894,2.43e-08,7;UBERON:0006222,2.43e-08,7;UBERON:0001896,9.47e-08,3;UBERON:0005290,9.47e-08,3;UBERON:0010096,9.47e-08,3;UBERON:0009663,2.46e-07,7;UBERON:0004111,2.90e-07,240;UBERON:0002021,5.37e-07,5 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,5.24259293112413,4.48403862988371,0.37129905888014,0,0,0,0,0,0.492484232307152,0.204000691244253,0,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.853815942907168,1.19276791489337,0.69716365721711,0.414644220061482,1.00928340350251,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,3.93563003337963,0,0,0,0,0,0,0,0,0.927443239800615,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514414748524284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,2.12189300012382,3.32870879020994,7.86214762657169,0.248107807818777,0,0,0,0.511707249066704,0,0,0.154209693802656,0,0,0,0,1.32945394550784,0,0,0,0,0,0.451199612907412,0.15403067420883,0.784349769176855,0,0.316654886678627,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0.256450125116389,0,0.325378394664303,0.206082023295445,0,0,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.568272293612826,0.23874448473769,0,0,0.994147647766298,0.984685914873589,0,0,0,0.19924798825107,0,7.55798243562828,0,0,0,0,0,0,0.394573622547734,0,0,0,0.927680981618513,1.99613798001194,0,0,0,0,0,0,1.03423011972439,0,1.38899995946634,2.65722415744152,1.5677537021303,0,1.21637185924347,2.65992857058193,1.75508317723178,0,0,1.30815439456455,0,0.23056390438806,0,2.82483166997221,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.565412285735763,0.216388639742091,2.98578579323551,0.619202951523374,0.611030144933625,0,0,0,2.29163852134302,0,1.40558667435203,0,0.19566461893209,0,0.789168805698781,0,0.91821828489147,0.252746318513952,0,0,0.664653872707185,1.98595173525299,0.941798755221676,1.19472429772959,0.569219092059585,0,0,0,0,0.17472666824203,0,0,0,0,0.387956065953678,0.353024506766001,1.80784592624426,0,0.397429223405979,3.10222900183806,0.195551382734803,1.12222348352147,0,0,0,0.687219576995494,4.28987494654911,0,0,0,0,0,0,0,1.20084057741958,1.09524303113594,0,1.71906176567983,0,0,0,0,2.39614800598789,0,0,0.268733889946905,0,2.32991899054908,4.6482077561262,5.19219907801349,4.17901971895946,0.393709926058995,0,0.795229689809303,1.49823746722733,0.803765742325096,0.412618309791701,1.66176135211674,0,0,3.64497339948148,0,0.315222829196793,0.786818822024972,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.339936274560377,0,0,3.61992277812342,2.77688463659649,0.171086837884329,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,1.25643277000187,0.886068179966986,1.09823638411767,0.876336514945499,3.44045517414043,2.21858103073705,2.85643453530364,0.276697269872462,0,0.606596470166591,0,0,2.34167452903441,0.724605143054126,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,1.34833881285112,0.428883182749851,3.65392008751296,0.226705925512272,0,0,0,0.617602894321944,0,0.176689145945881,0,0.844712203265363,0,0,2.73473960559644,0.276516872303462,0,0,0.163565394255844,1.31043939538565,0,0,0,0,0,0,0.368211900503681,0,0,0.639471856518258,5.39124056983409,0.629063767423586,1.20130602011215,0,0,0,0,0,0,11.2079904759966,0,0,2.63339822895484,1.41696576325585,0.638535436228605,2.46139637088906,1.26035848110859,2.07471757392654,1.61475645631851,2.85538840518309,0,0,0,0,0,0,0,15.5685379682963,0,1.56302802246618,0,0,0,1.55336444622308,0.781078098613847,1.2401207790071,1.8390584956233,0.546974809018219,0,0.496211178389294,0.703484977438482,0,4.28561468702629,1.68141861109412,13.3532432932059,7.05752793189023,1.41923792260222,0,0,0.951576261675644,1.90741043332262,0,0,1.0989032999072,0.942693539496011,0.560544326627578,0.913158720509496,0,0.9555033757741,1.21510125100316,3.79232668158544,0.581207126840626,0,0,0,0,0,0,0,0,1.69354820076372,0.22910686854405,0,0,0,0,0,0,0,0,0,3.50909195193158,2.58636007709779,0,0,2.52863188514487,10.2654733625338,0.308696632431779,6.1196676941108,8.46571133450741,0,2.12108892391463,1.76677620403451,0.594092800654172,2.113278637917,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0.730336388246517,0,0.286679166302903,0,2.44769364687293,1.30905207102113,2.645134202577,0,0,0,0,0.218531143927391,0.126698501011437,0.203977659483963,0.534434810531121,0,0,0.454672189309436,0.267964130156178,0,0.724030971033267,0.213233981900981,0.952257725854961,0,0.186224142887574,0,0.0636471582781649,0.202117188958219,0.217716747896961,0.342233301085281,0.202056159043763,0.0717222053926763,0.99798106963804,1.46525883499754,0,0,0,4.69281884806909,1.58913877437726,0.813792356631477,0,0,0 | |||
|short_description=p4@GNG4 | |||
}} |
Latest revision as of 12:49, 16 September 2015
Short description: | p4@GNG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GNG4_5end |
Coexpression cluster: | NA |
Association with transcript: | 119bp_to_ENST00000366598, ENST00000450593, NM_001098721, NM_004485, uc001hxh.3, uc009xfz.2_5end |
EntrezGene: | GNG4 |
HGNC: | 4407 |
UniProt: | P50150B1APZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 5.85e-08 | 3 |