FFCP PHASE1:Hg19::chr2:24583284..24583310,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50618 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6184 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=30bp_to_ENST00000407704_5end | |||
|cluster_id=chr2:24583284..24583310,- | |||
|coexpression_cluster_id=C399 | |||
|description=CAGE_peak_3_at_ITSN2_5end | |||
|id=chr2:24583284..24583310,- | |||
|ontology_enrichment_celltype=CL:0000738!6.72e-41!140;CL:0000037!1.71e-40!172;CL:0000566!1.71e-40!172;CL:0002032!3.57e-37!165;CL:0000837!3.57e-37!165;CL:0000988!4.41e-36!182;CL:0002087!9.61e-32!119;CL:0002031!3.24e-31!124;CL:0000763!1.52e-20!112;CL:0000049!1.52e-20!112;CL:0000766!9.36e-20!76;CL:0002057!1.15e-19!42;CL:0000860!1.09e-18!45;CL:0000557!1.07e-16!71;CL:0000542!1.29e-15!53;CL:0000051!1.29e-15!53;CL:0000838!1.52e-15!52;CL:0002009!1.66e-15!65;CL:0000839!1.98e-14!70;CL:0002194!2.42e-14!63;CL:0000576!2.42e-14!63;CL:0000040!2.42e-14!63;CL:0000559!2.42e-14!63;CL:0000945!2.36e-09!24;CL:0000826!2.36e-09!24;CL:0000236!4.00e-08!14;CL:0000791!5.66e-07!18;CL:0000789!5.66e-07!18;CL:0002420!5.66e-07!18;CL:0002419!5.66e-07!18;CL:0000790!5.66e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.02e-19;33!CL:0002057;1.02e-19;33!CL:0000576;2.84e-15;48!CL:0000473;5.58e-14;39!CL:0000234;5.58e-14;39!CL:0000766;6.46e-12;69!CL:0002087;1.80e-11;104!CL:0000945;6.61e-11;24!CL:0000738;4.06e-10;136!CL:0000236;4.30e-10;13!CL:0000094;1.89e-09;8!CL:0000542;1.17e-08;53!CL:0000624;2.01e-07;6!CL:0000988;6.44e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.18e-44,136;CL:0000037,4.29e-38,168;CL:0002032,6.39e-35,161;CL:0000837,6.39e-35,161;CL:0002087,6.55e-35,115;CL:0000988,2.69e-34,177;CL:0002031,5.04e-34,120;CL:0000860,3.79e-28,42;CL:0002057,3.79e-28,42;CL:0000766,4.39e-25,72;CL:0000473,7.90e-24,48;CL:0000234,7.90e-24,48;CL:0000557,1.50e-20,67;CL:0002009,5.26e-20,61;CL:0000763,5.48e-20,108;CL:0000049,5.48e-20,108;CL:0002194,2.93e-18,59;CL:0000576,2.93e-18,59;CL:0000040,2.93e-18,59;CL:0000559,2.93e-18,59;CL:0000839,1.82e-17,66;CL:0000838,1.70e-14,52;CL:0000542,5.38e-14,53;CL:0000051,5.38e-14,53;CL:0000945,5.91e-11,24;CL:0000826,5.91e-11,24;CL:0000236,2.02e-10,14;CL:0000094,1.66e-09,8;CL:0002393,1.55e-07,9;CL:0002397,1.55e-07,9;CL:0000624,1.81e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.35e-20;42!CL:0000051;1.17e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.23e-20!115;UBERON:0002390!1.50e-17!102;UBERON:0003061!1.50e-17!102;UBERON:0002193!2.28e-16!112;UBERON:0001049!2.41e-13!57;UBERON:0005068!2.41e-13!57;UBERON:0006241!2.41e-13!57;UBERON:0007135!2.41e-13!57;UBERON:0002780!2.67e-13!41;UBERON:0001890!2.67e-13!41;UBERON:0006240!2.67e-13!41;UBERON:0003080!1.67e-12!42;UBERON:0002371!1.93e-12!80;UBERON:0001893!1.48e-11!34;UBERON:0001869!2.02e-11!32;UBERON:0002020!2.28e-11!34;UBERON:0003528!2.28e-11!34;UBERON:0001474!3.89e-11!86;UBERON:0002791!4.61e-11!33;UBERON:0002619!7.94e-11!22;UBERON:0002616!2.83e-10!59;UBERON:0001950!4.25e-10!20;UBERON:0000955!1.53e-09!69;UBERON:0006238!1.53e-09!69;UBERON:0000956!3.32e-09!25;UBERON:0000203!3.32e-09!25;UBERON:0001017!8.05e-09!82;UBERON:0004765!1.05e-08!101;UBERON:0001434!1.05e-08!101;UBERON:0005743!1.82e-08!86;UBERON:0002405!2.84e-08!115;UBERON:0000073!2.13e-07!94;UBERON:0001016!2.13e-07!94;UBERON:0003075!4.19e-07!86;UBERON:0007284!4.19e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.08e-15;22!UBERON:0001950;9.54e-14;20!UBERON:0001869;3.01e-13;32!UBERON:0001893;2.17e-12;34!UBERON:0000956;2.33e-12;25!UBERON:0000203;2.33e-12;25!UBERON:0002791;3.55e-12;32!UBERON:0003528;6.74e-12;34!UBERON:0002020;6.74e-12;34!UBERON:0002780;5.96e-11;41!UBERON:0001890;5.96e-11;41!UBERON:0000073;1.55e-08;53!UBERON:0002616;1.55e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.34e-21,98;UBERON:0003061,5.34e-21,98;UBERON:0002193,1.14e-19,108;UBERON:0007023,2.49e-19,114;UBERON:0002405,2.15e-16,93;UBERON:0002371,3.29e-16,76;UBERON:0001049,9.33e-16,56;UBERON:0005068,9.33e-16,56;UBERON:0006241,9.33e-16,56;UBERON:0007135,9.33e-16,56;UBERON:0000073,1.58e-15,53;UBERON:0002616,1.58e-15,53;UBERON:0001869,3.95e-15,32;UBERON:0002780,3.98e-15,41;UBERON:0001890,3.98e-15,41;UBERON:0003080,3.98e-15,41;UBERON:0006240,3.98e-15,41;UBERON:0002619,4.08e-15,22;UBERON:0001893,1.10e-14,34;UBERON:0001950,5.62e-14,20;UBERON:0001474,6.73e-14,82;UBERON:0002791,1.15e-13,32;UBERON:0003528,1.58e-13,34;UBERON:0002020,1.58e-13,34;UBERON:0000956,1.65e-12,25;UBERON:0000203,1.65e-12,25;UBERON:0004765,6.72e-12,90;UBERON:0000955,1.25e-11,68;UBERON:0006238,1.25e-11,68;UBERON:0001017,1.55e-10,81;UBERON:0001434,5.06e-10,100;UBERON:0003075,3.74e-09,82;UBERON:0007284,3.74e-09,82;UBERON:0001016,8.87e-09,89;UBERON:0003056,9.99e-09,61;UBERON:0002346,3.46e-08,86 | |||
|phase1_expression=0.726713517082227,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0.618831764800233,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0,1.37544130346312,1.39571002064908,1.33808328233255,3.93364276848904,7.29275856384704,3.40595471295367,0,0.30120591877825,0,1.85921281392724,1.56386155736164,0.880801318004542,3.87796785972314,3.81034450193269,4.55722828503289,0.671746422719773,0.32389366601898,1.03030227053675,3.34415949192999,5.66813915533214,4.12392904019288,5.11343881192506,3.28934310417461,3.71647645074124,2.8769239232215,2.56160706529101,2.83778675866302,1.37898272294647,3.22742341791913,4.06279459783025,4.32957380947991,3.82068610080984,4.04502272001152,3.06083892370903,4.49300637906531,3.19668562899521,3.95821560224059,2.79249120670285,2.98357325372886,2.32167390902867,2.8369261234557,3.73693349397345,2.00998932205395,4.69334626578181,3.25783267057675,0.605399502633369,5.15588690382591,4.1140110367315,3.16882929467913,3.82687739937078,1.04829322754188,1.57260083605093,0.450530678524519,1.92870704036496,2.56511469367124,2.98375015798635,2.00930569141097,7.03984977845291,4.91524750135918,6.22656477704488,7.68114400619713,5.20514783146816,6.32227683949932,5.94940385506376,6.67837628174755,9.10740750575117,14.6809297342735,11.8504700718821,17.1822727152734,10.0891541336676,1.05353633910031,8.65522988500866,8.64623678048162,7.81285696198135,0.668745981562712,4.23698946623668,4.2610302516126,1.94826728407911,0.779873198196215,3.82987679717288,3.1014745241707,2.16643091012012,1.40900451698243,0.780356085359269,0.493313713811028,2.21080014228679,2.31842468588042,3.70716407905151,3.21048993707656,5.22677619024884,0.793165398882963,8.04763036564035,6.52892146416997,4.55435445635105,0.95569624297229,0.651083453856419,0.950452044448374,1.20460095262218,1.91979916731628,0,0.947109008176067,3.28451198768419,10.6851573909108,7.2208852861547,6.66192257860875,0,0,0.12786256184353,0.361439152384566,0,0.289693037921647,0,0,0.283604451492204,0,0.087834785693126,0.982343066232845,0,0,0.97364218096405,0.696518949197069,0.398873881556595,5.96226560763355,4.0039643754609,10.4008100372278,0,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.417989933073621,0,0,2.00832367658802,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0.0892997282840798,0,0.225222960966644,1.53316637465883,0,0,13.1780417436063,11.6334079244498,0.436094052142534,0,0,0.397227542439656,0,0,1.12135520028461,0,0.74000264525148,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0.280901613404497,0,0,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0,0.277064115484183,0,0.30648779579902,0.150238058906597,0.113432183160021,0,0,0,0,0,0.515281080091258,0,0,0,0,0,0.323292113637624,0,0.10075209822764,0,0.386521706326594,0.272746120590835,0,0.121973706129595,0.265059536642971,0.348581828608555,0.207322110030741,0.756962552626885,0,0,0,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0.171567810298526,0.329250856225877,0,0.100528972411631,0.0925884451585296,0,0,0,0.34779121492523,0.117408694235822,0.288732895522148,0,0.380508304469197,0,0,0.984868024349589,1.17002132569619,0.297262324577456,0,0.16798212819886,0.141775097242386,0,0,0,2.46331618947972,0.880484340132261,1.24396869324463,0.432359860250884,1.51490920111656,0,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.336255431980582,10.0485687702983,7.54696512008311,6.93052395910641,0,0,0,0.167516265334349,0.637938751653163,8.23907726341901,5.9832291840805,12.8468809165171,0.24538298343828,1.00034104211935,0,0.831883446123229,0,0,0,0,0,0,0,0.184369168541703,0,0,0,7.85718499266972,4.09856981555372,7.04401881502733,0,0,0,0,0.460385919864187,0,0.128139149255701,0.511707249066704,0,0,0,0,0,0.519254429183621,0,0.241718899183244,0.40101294060657,0.0920809889358963,0.229628896329213,0.182091168006717,0.131124414959424,0,0,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0.328014645699706,0,0.9273691048295,0.54941678891006,0.330037999682352,0,0.650060246036521,0,0.290012154876366,0,0.15350367472613,0.137836572484531,0.107420244868274,0.290033387828457,0.340906509664404,0.534192213880424,0,0.192190067365106,0.765676274967505,0.30347334256665,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.470719003883896,0,0,0,0,1.52234282769651,0.764637207142375,1.13929437434833,1.90585420366231,1.64544909234478,2.59389324477087,3.24018862342869,2.37937552888281,0.534120355637366,0,0.490080431962063,0.743212700502875,0.432807638929335,0.569134746787313,0.797131363644112,0.59873811429845,0.957526850661834,1.48171507906718,0,0.842391534340376,2.51058146936511,0.626719583092093,7.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| |||
|short_description=p3@ITSN2 | |||
}} |
Latest revision as of 12:51, 16 September 2015
Short description: | p3@ITSN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ITSN2_5end |
Coexpression cluster: | C399_CD19_Eosinophils_CD4_CD8_CD14_Basophils_Natural |
Association with transcript: | 30bp_to_ENST00000407704_5end |
EntrezGene: | ITSN2 |
HGNC: | 6184 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.34e-21 | 98 |
blood island | 5.34e-21 | 98 |
hemolymphoid system | 1.14e-19 | 108 |
adult organism | 2.49e-19 | 114 |
immune system | 2.15e-16 | 93 |
bone marrow | 3.29e-16 | 76 |
neural tube | 9.33e-16 | 56 |
neural rod | 9.33e-16 | 56 |
future spinal cord | 9.33e-16 | 56 |
neural keel | 9.33e-16 | 56 |
regional part of nervous system | 1.58e-15 | 53 |
regional part of brain | 1.58e-15 | 53 |
cerebral hemisphere | 3.95e-15 | 32 |
regional part of forebrain | 3.98e-15 | 41 |
forebrain | 3.98e-15 | 41 |
anterior neural tube | 3.98e-15 | 41 |
future forebrain | 3.98e-15 | 41 |
regional part of cerebral cortex | 4.08e-15 | 22 |
telencephalon | 1.10e-14 | 34 |
neocortex | 5.62e-14 | 20 |
bone element | 6.73e-14 | 82 |
regional part of telencephalon | 1.15e-13 | 32 |
brain grey matter | 1.58e-13 | 34 |
gray matter | 1.58e-13 | 34 |
cerebral cortex | 1.65e-12 | 25 |
pallium | 1.65e-12 | 25 |
skeletal element | 6.72e-12 | 90 |
brain | 1.25e-11 | 68 |
future brain | 1.25e-11 | 68 |
central nervous system | 1.55e-10 | 81 |
skeletal system | 5.06e-10 | 100 |
neural plate | 3.74e-09 | 82 |
presumptive neural plate | 3.74e-09 | 82 |
nervous system | 8.87e-09 | 89 |
pre-chordal neural plate | 9.99e-09 | 61 |
neurectoderm | 3.46e-08 | 86 |