FFCP PHASE1:Hg19::chr1:12185656..12185684,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=943 | |EntrezGene=943 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11923 | |HGNC=11923 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-271bp_to_ENST00000413146_5end | |association_with_transcript=-271bp_to_ENST00000413146_5end | ||
|cluster_id=chr1:12185656..12185684,+ | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_10_at_TNFRSF8_5end | |description=CAGE_peak_10_at_TNFRSF8_5end | ||
|id=chr1:12185656..12185684,+ | |id=chr1:12185656..12185684,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.12e-64!42;CL:0000860!4.67e-59!45;CL:0002194!8.62e-43!63;CL:0000576!8.62e-43!63;CL:0000040!8.62e-43!63;CL:0000559!8.62e-43!63;CL:0002009!3.93e-41!65;CL:0000766!3.70e-40!76;CL:0000839!2.13e-37!70;CL:0000557!1.03e-36!71;CL:0000763!9.56e-25!112;CL:0000049!9.56e-25!112;CL:0002087!4.31e-21!119;CL:0000738!8.69e-21!140;CL:0002031!1.51e-17!124;CL:0000037!1.27e-14!172;CL:0000566!1.27e-14!172;CL:0002032!5.30e-14!165;CL:0000837!5.30e-14!165;CL:0000988!3.66e-13!182;CL:0002393!1.54e-12!9;CL:0002397!1.54e-12!9;CL:0000875!1.40e-08!3;CL:0002396!1.40e-08!3 | |ontology_enrichment_celltype=CL:0002057!4.12e-64!42;CL:0000860!4.67e-59!45;CL:0002194!8.62e-43!63;CL:0000576!8.62e-43!63;CL:0000040!8.62e-43!63;CL:0000559!8.62e-43!63;CL:0002009!3.93e-41!65;CL:0000766!3.70e-40!76;CL:0000839!2.13e-37!70;CL:0000557!1.03e-36!71;CL:0000763!9.56e-25!112;CL:0000049!9.56e-25!112;CL:0002087!4.31e-21!119;CL:0000738!8.69e-21!140;CL:0002031!1.51e-17!124;CL:0000037!1.27e-14!172;CL:0000566!1.27e-14!172;CL:0002032!5.30e-14!165;CL:0000837!5.30e-14!165;CL:0000988!3.66e-13!182;CL:0002393!1.54e-12!9;CL:0002397!1.54e-12!9;CL:0000875!1.40e-08!3;CL:0002396!1.40e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.74e-41;33!CL:0002057;6.74e-41;33!CL:0000576;7.14e-35;48!CL:0000473;3.26e-29;39!CL:0000234;3.26e-29;39!CL:0000875;1.25e-22;3!CL:0002396;1.25e-22;3!CL:0000766;7.98e-22;69!CL:0000763;3.03e-11;100!CL:0002087;1.24e-10;104!CL:0000775;3.75e-10;3!CL:0000738;1.65e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.17e-62,42;CL:0002057,1.17e-62,42;CL:0000473,2.33e-54,48;CL:0000234,2.33e-54,48;CL:0002194,9.79e-43,59;CL:0000576,9.79e-43,59;CL:0000040,9.79e-43,59;CL:0000559,9.79e-43,59;CL:0000766,4.11e-42,72;CL:0002009,3.10e-41,61;CL:0000839,7.11e-38,66;CL:0000557,2.92e-37,67;CL:0000763,7.48e-27,108;CL:0000049,7.48e-27,108;CL:0000738,1.16e-22,136;CL:0000875,1.20e-22,3;CL:0002396,1.20e-22,3;CL:0002087,1.53e-22,115;CL:0002031,1.91e-21,120;CL:0002393,9.03e-20,9;CL:0002397,9.03e-20,9;CL:0002032,1.67e-18,161;CL:0000837,1.67e-18,161;CL:0000037,1.48e-17,168;CL:0000988,1.89e-16,177;CL:0000775,4.31e-10,3 | |||
|ontology_enrichment_development_v019=CL:0002057;7.98e-45;42!CL:0000049;1.99e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.01e-35!102;UBERON:0003061!5.01e-35!102;UBERON:0002193!6.56e-34!112;UBERON:0002371!2.51e-31!80;UBERON:0001474!2.30e-28!86;UBERON:0004765!1.63e-22!101;UBERON:0001434!1.63e-22!101;UBERON:0002405!4.31e-22!115;UBERON:0007023!8.49e-18!115;UBERON:0003081!3.92e-15!216;UBERON:0002204!2.62e-10!167;UBERON:0000926!8.70e-08!448;UBERON:0004120!8.70e-08!448;UBERON:0006603!8.70e-08!448 | |ontology_enrichment_uberon=UBERON:0002390!5.01e-35!102;UBERON:0003061!5.01e-35!102;UBERON:0002193!6.56e-34!112;UBERON:0002371!2.51e-31!80;UBERON:0001474!2.30e-28!86;UBERON:0004765!1.63e-22!101;UBERON:0001434!1.63e-22!101;UBERON:0002405!4.31e-22!115;UBERON:0007023!8.49e-18!115;UBERON:0003081!3.92e-15!216;UBERON:0002204!2.62e-10!167;UBERON:0000926!8.70e-08!448;UBERON:0004120!8.70e-08!448;UBERON:0006603!8.70e-08!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0000996;4.72e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.68e-33,98;UBERON:0003061,6.68e-33,98;UBERON:0002371,1.84e-32,76;UBERON:0001474,7.74e-30,82;UBERON:0002193,1.70e-29,108;UBERON:0004765,7.07e-27,90;UBERON:0002405,6.77e-26,93;UBERON:0001434,7.81e-24,100;UBERON:0003081,3.22e-15,203;UBERON:0002204,8.90e-13,167;UBERON:0000926,3.31e-09,315;UBERON:0004120,3.31e-09,315;UBERON:0006603,3.31e-09,315;UBERON:0000996,3.10e-08,1 | |||
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| ||
|short_description=p10@TNFRSF8 | |short_description=p10@TNFRSF8 | ||
}} | }} |
Latest revision as of 13:25, 16 September 2015
Short description: | p10@TNFRSF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TNFRSF8_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | -271bp_to_ENST00000413146_5end |
EntrezGene: | TNFRSF8 |
HGNC: | 11923 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.17e-62 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.17e-62 | 42 |
defensive cell | 2.33e-54 | 48 |
phagocyte | 2.33e-54 | 48 |
monopoietic cell | 9.79e-43 | 59 |
monocyte | 9.79e-43 | 59 |
monoblast | 9.79e-43 | 59 |
promonocyte | 9.79e-43 | 59 |
myeloid leukocyte | 4.11e-42 | 72 |
macrophage dendritic cell progenitor | 3.10e-41 | 61 |
myeloid lineage restricted progenitor cell | 7.11e-38 | 66 |
granulocyte monocyte progenitor cell | 2.92e-37 | 67 |
myeloid cell | 7.48e-27 | 108 |
common myeloid progenitor | 7.48e-27 | 108 |
leukocyte | 1.16e-22 | 136 |
non-classical monocyte | 1.20e-22 | 3 |
CD14-low, CD16-positive monocyte | 1.20e-22 | 3 |
nongranular leukocyte | 1.53e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.91e-21 | 120 |
intermediate monocyte | 9.03e-20 | 9 |
CD14-positive, CD16-positive monocyte | 9.03e-20 | 9 |
hematopoietic oligopotent progenitor cell | 1.67e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.67e-18 | 161 |
hematopoietic stem cell | 1.48e-17 | 168 |
hematopoietic cell | 1.89e-16 | 177 |
neutrophil | 4.31e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.68e-33 | 98 |
blood island | 6.68e-33 | 98 |
bone marrow | 1.84e-32 | 76 |
bone element | 7.74e-30 | 82 |
hemolymphoid system | 1.70e-29 | 108 |
skeletal element | 7.07e-27 | 90 |
immune system | 6.77e-26 | 93 |
skeletal system | 7.81e-24 | 100 |
lateral plate mesoderm | 3.22e-15 | 203 |
musculoskeletal system | 8.90e-13 | 167 |
mesoderm | 3.31e-09 | 315 |
mesoderm-derived structure | 3.31e-09 | 315 |
presumptive mesoderm | 3.31e-09 | 315 |
vagina | 3.10e-08 | 1 |