FFCP PHASE1:Hg19::chr12:114845810..114845824,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6910 | |EntrezGene=6910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11604 | |HGNC=11604 | ||
|TSSclassifier=strong | |||
|UniProt=E7ENS7 | |UniProt=E7ENS7 | ||
|association_with_transcript=21bp_to_ENST00000448888_5end | |association_with_transcript=21bp_to_ENST00000448888_5end | ||
|cluster_id=chr12:114845810..114845824,- | |||
|coexpression_cluster_id=C90 | |coexpression_cluster_id=C90 | ||
|description=CAGE_peak_1_at_TBX5_5end | |description=CAGE_peak_1_at_TBX5_5end | ||
|id=chr12:114845810..114845824,- | |id=chr12:114845810..114845824,- | ||
|ontology_enrichment_celltype=CL:0002620!1.29e-18!23;CL:0000057!5.69e-14!75;CL:0000569!1.85e-09!4;CL:0000011!1.85e-09!4;CL:0002334!5.76e-09!12;CL:0002580!2.49e-08!3;CL:0002494!3.54e-08!16 | |ontology_enrichment_celltype=CL:0002620!1.29e-18!23;CL:0000057!5.69e-14!75;CL:0000569!1.85e-09!4;CL:0000011!1.85e-09!4;CL:0002334!5.76e-09!12;CL:0002580!2.49e-08!3;CL:0002494!3.54e-08!16 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.71e-21;23!CL:0002600;7.23e-12;2!CL:0002598;7.63e-12;2!CL:0002580;8.42e-08;3!CL:0002574;4.85e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.51e-21,23;CL:0002598,6.49e-12,2;CL:0002600,8.06e-12,2;CL:0000057,1.56e-10,76;CL:0002580,8.58e-08,3;CL:0002574,4.85e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0004140;4.58e-07;1!UBERON:0010227;5.74e-07;1 | |||
|ontology_enrichment_disease=DOID:17!1.09e-12!5;DOID:450!1.09e-12!5;DOID:66!1.09e-12!5;DOID:423!1.09e-12!5;DOID:0080000!1.09e-12!5;DOID:11722!1.09e-12!5 | |ontology_enrichment_disease=DOID:17!1.09e-12!5;DOID:450!1.09e-12!5;DOID:66!1.09e-12!5;DOID:423!1.09e-12!5;DOID:0080000!1.09e-12!5;DOID:11722!1.09e-12!5 | ||
|ontology_enrichment_disease_v019=DOID:114;2.83e-11;2!DOID:17;4.07e-10;5!DOID:450;4.07e-10;5!DOID:66;4.07e-10;5!DOID:423;4.07e-10;5!DOID:0080000;4.07e-10;5!DOID:11722;4.07e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.75e-11,2;DOID:17,4.47e-10,5;DOID:450,4.47e-10,5;DOID:66,4.47e-10,5;DOID:423,4.47e-10,5;DOID:0080000,4.47e-10,5;DOID:11722,4.47e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0007100!7.49e-20!27;UBERON:0000948!1.90e-14!24;UBERON:0005498!1.90e-14!24;UBERON:0004140!1.90e-14!24;UBERON:0009881!1.90e-14!24;UBERON:0004141!1.90e-14!24;UBERON:0003084!1.90e-14!24;UBERON:0007005!1.90e-14!24;UBERON:0004139!1.90e-14!24;UBERON:0004291!1.90e-14!24;UBERON:0003103!6.52e-13!69;UBERON:0002097!3.36e-09!40;UBERON:0002199!5.41e-09!45;UBERON:0002416!5.41e-09!45;UBERON:0000915!1.12e-08!52;UBERON:0001443!1.58e-07!11;UBERON:0005181!9.68e-07!35 | |ontology_enrichment_uberon=UBERON:0007100!7.49e-20!27;UBERON:0000948!1.90e-14!24;UBERON:0005498!1.90e-14!24;UBERON:0004140!1.90e-14!24;UBERON:0009881!1.90e-14!24;UBERON:0004141!1.90e-14!24;UBERON:0003084!1.90e-14!24;UBERON:0007005!1.90e-14!24;UBERON:0004139!1.90e-14!24;UBERON:0004291!1.90e-14!24;UBERON:0003103!6.52e-13!69;UBERON:0002097!3.36e-09!40;UBERON:0002199!5.41e-09!45;UBERON:0002416!5.41e-09!45;UBERON:0000915!1.12e-08!52;UBERON:0001443!1.58e-07!11;UBERON:0005181!9.68e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.43e-12;25!UBERON:0007196;1.02e-08;15!UBERON:0001558;1.02e-08;15!UBERON:0002097;1.76e-08;41!UBERON:0005178;4.48e-08;34!UBERON:0002224;4.48e-08;34!UBERON:0004151;4.72e-08;3!UBERON:0005181;2.54e-07;35!UBERON:0002135;4.33e-07;1!UBERON:0002079;5.74e-07;1!UBERON:0002199;6.92e-07;46!UBERON:0002416;6.92e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.54e-11,27;UBERON:0002097,5.00e-11,41;UBERON:0002199,1.23e-09,46;UBERON:0002416,1.23e-09,46;UBERON:0005178,5.84e-09,34;UBERON:0002224,5.84e-09,34;UBERON:0007196,9.19e-09,15;UBERON:0001558,9.19e-09,15;UBERON:0005181,1.14e-08,35;UBERON:0000915,1.88e-08,52;UBERON:0004151,4.72e-08,3;UBERON:0002135,4.33e-07,1;UBERON:0002079,5.75e-07,1 | |||
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|phase1_expression=0.363356758541113,0.642301571672949,0,1.0007329835313,0,0,0,0,0,1.72013755551056,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24271040056923,0,0.98667019366864,0.311211035399766,0,0.326923806226917,0,0,0,0,0,0.448346041655403,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30535125653269,0.213557388818567,1.05965950579781,3.30100205692843,0.824420233907511,0,0,1.5189869901714,1.65642908774038,8.83518209854401,2.66944706062668,0,3.19508633264953,1.41052937518696,5.08681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3800766280848,1.17480694477644,0,0,0,0,0,0,0,0.744323423456331,2.91577749247319,1.12264037773229,0,2.04682899626681,0,0,0.154209693802656,0,0,0.519254429183621,0.116210378459959,0,0,0,0.68888668898764,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.70052490458535,2.99557291623744,0,0,0,0,0,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,4.05142873986681,3.27947376023316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,2.75177651954586,0,0,0,0.581934098930517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.072452955215,0.229160424011684,0,1.59743200399193,2.14613024068285,4.24025769139558,22.6408302280268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.29103924285377,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69864615297857,11.9475271875746,2.89967338743037,0,0,0,0,0,0.5013797880454,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.756154618816195,0.777186002913902,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7233277448085,0,0,0,114.365307014705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90290428715611,0,0,0,0,0,0,0.470958557103084,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0.606351566874658,0,0,0,0,0.99798106963804,0,0,5.7921684686082,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p1@TBX5 | |short_description=p1@TBX5 | ||
}} | }} |
Latest revision as of 14:14, 16 September 2015
Short description: | p1@TBX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TBX5_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | 21bp_to_ENST00000448888_5end |
EntrezGene: | TBX5 |
HGNC: | 11604 |
UniProt: | E7ENS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.51e-21 | 23 |
bronchial smooth muscle cell | 6.49e-12 | 2 |
smooth muscle cell of trachea | 8.06e-12 | 2 |
fibroblast | 1.56e-10 | 76 |
preadipocyte of the breast | 8.58e-08 | 3 |
stromal cell of pancreas | 4.85e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.54e-11 | 27 |
skin of body | 5.00e-11 | 41 |
integument | 1.23e-09 | 46 |
integumental system | 1.23e-09 | 46 |
thoracic cavity element | 5.84e-09 | 34 |
thoracic cavity | 5.84e-09 | 34 |
tracheobronchial tree | 9.19e-09 | 15 |
lower respiratory tract | 9.19e-09 | 15 |
thoracic segment organ | 1.14e-08 | 35 |
thoracic segment of trunk | 1.88e-08 | 52 |
cardiac chamber | 4.72e-08 | 3 |
mitral valve | 4.33e-07 | 1 |
left cardiac atrium | 5.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.75e-11 | 2 |
musculoskeletal system disease | 4.47e-10 | 5 |
myotonic disease | 4.47e-10 | 5 |
muscle tissue disease | 4.47e-10 | 5 |
myopathy | 4.47e-10 | 5 |
muscular disease | 4.47e-10 | 5 |
myotonic dystrophy | 4.47e-10 | 5 |