FFCP PHASE1:Hg19::chr1:236849791..236849806,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=88 | |EntrezGene=88 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=164 | |HGNC=164 | ||
|TSSclassifier=strong | |||
|UniProt=P35609 | |UniProt=P35609 | ||
|association_with_transcript=-1bp_to_ENST00000366578_5end | |association_with_transcript=-1bp_to_ENST00000366578_5end | ||
|cluster_id=chr1:236849791..236849806,+ | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_1_at_ACTN2_5end | |description=CAGE_peak_1_at_ACTN2_5end | ||
|id=chr1:236849791..236849806,+ | |id=chr1:236849791..236849806,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.04e-10!42;CL:0000860!1.74e-08!45 | |ontology_enrichment_celltype=CL:0002057!4.04e-10!42;CL:0000860!1.74e-08!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.64e-13;33!CL:0002057;7.64e-13;33!CL:0000473;5.71e-08;39!CL:0000234;5.71e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.42e-09,42;CL:0002057,5.42e-09,42;CL:0000473,8.15e-07,48;CL:0000234,8.15e-07,48 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.00e-11;82!CL:0002057;4.05e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.36e-33!115;UBERON:0001049!2.51e-23!57;UBERON:0005068!2.51e-23!57;UBERON:0006241!2.51e-23!57;UBERON:0007135!2.51e-23!57;UBERON:0000073!1.24e-22!94;UBERON:0001016!1.24e-22!94;UBERON:0001017!7.61e-22!82;UBERON:0005743!1.25e-21!86;UBERON:0002346!2.14e-20!90;UBERON:0003080!1.43e-19!42;UBERON:0002780!1.91e-19!41;UBERON:0001890!1.91e-19!41;UBERON:0006240!1.91e-19!41;UBERON:0001893!3.28e-19!34;UBERON:0002020!3.68e-19!34;UBERON:0003528!3.68e-19!34;UBERON:0002791!1.18e-18!33;UBERON:0002616!2.52e-18!59;UBERON:0003075!4.08e-18!86;UBERON:0007284!4.08e-18!86;UBERON:0001869!6.85e-18!32;UBERON:0000955!6.25e-17!69;UBERON:0006238!6.25e-17!69;UBERON:0000956!1.88e-13!25;UBERON:0000203!1.88e-13!25;UBERON:0002619!1.88e-13!22;UBERON:0000922!1.52e-12!612;UBERON:0001950!1.77e-12!20;UBERON:0000924!3.03e-12!173;UBERON:0006601!3.03e-12!173;UBERON:0003056!4.44e-12!61;UBERON:0002050!9.20e-11!605;UBERON:0005423!9.20e-11!605;UBERON:0004121!1.01e-10!169;UBERON:0000923!1.46e-10!604;UBERON:0005291!1.46e-10!604;UBERON:0006598!1.46e-10!604;UBERON:0002532!1.46e-10!604;UBERON:0000468!2.80e-09!659;UBERON:0000153!1.84e-08!129;UBERON:0007811!1.84e-08!129;UBERON:0000033!5.55e-08!123;UBERON:0002308!2.82e-07!9;UBERON:0000125!2.82e-07!9;UBERON:0000467!3.11e-07!625;UBERON:0002420!3.95e-07!9;UBERON:0007245!3.95e-07!9;UBERON:0010009!3.95e-07!9;UBERON:0010011!3.95e-07!9;UBERON:0000454!3.95e-07!9;UBERON:0000480!4.31e-07!626 | |ontology_enrichment_uberon=UBERON:0007023!6.36e-33!115;UBERON:0001049!2.51e-23!57;UBERON:0005068!2.51e-23!57;UBERON:0006241!2.51e-23!57;UBERON:0007135!2.51e-23!57;UBERON:0000073!1.24e-22!94;UBERON:0001016!1.24e-22!94;UBERON:0001017!7.61e-22!82;UBERON:0005743!1.25e-21!86;UBERON:0002346!2.14e-20!90;UBERON:0003080!1.43e-19!42;UBERON:0002780!1.91e-19!41;UBERON:0001890!1.91e-19!41;UBERON:0006240!1.91e-19!41;UBERON:0001893!3.28e-19!34;UBERON:0002020!3.68e-19!34;UBERON:0003528!3.68e-19!34;UBERON:0002791!1.18e-18!33;UBERON:0002616!2.52e-18!59;UBERON:0003075!4.08e-18!86;UBERON:0007284!4.08e-18!86;UBERON:0001869!6.85e-18!32;UBERON:0000955!6.25e-17!69;UBERON:0006238!6.25e-17!69;UBERON:0000956!1.88e-13!25;UBERON:0000203!1.88e-13!25;UBERON:0002619!1.88e-13!22;UBERON:0000922!1.52e-12!612;UBERON:0001950!1.77e-12!20;UBERON:0000924!3.03e-12!173;UBERON:0006601!3.03e-12!173;UBERON:0003056!4.44e-12!61;UBERON:0002050!9.20e-11!605;UBERON:0005423!9.20e-11!605;UBERON:0004121!1.01e-10!169;UBERON:0000923!1.46e-10!604;UBERON:0005291!1.46e-10!604;UBERON:0006598!1.46e-10!604;UBERON:0002532!1.46e-10!604;UBERON:0000468!2.80e-09!659;UBERON:0000153!1.84e-08!129;UBERON:0007811!1.84e-08!129;UBERON:0000033!5.55e-08!123;UBERON:0002308!2.82e-07!9;UBERON:0000125!2.82e-07!9;UBERON:0000467!3.11e-07!625;UBERON:0002420!3.95e-07!9;UBERON:0007245!3.95e-07!9;UBERON:0010009!3.95e-07!9;UBERON:0010011!3.95e-07!9;UBERON:0000454!3.95e-07!9;UBERON:0000480!4.31e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.63e-19;34!UBERON:0003528;1.90e-19;34!UBERON:0002020;1.90e-19;34!UBERON:0002791;3.31e-19;32!UBERON:0001869;4.66e-19;32!UBERON:0002619;1.93e-17;22!UBERON:0002780;2.07e-17;41!UBERON:0001890;2.07e-17;41!UBERON:0001950;3.80e-16;20!UBERON:0000073;9.39e-16;53!UBERON:0002616;9.39e-16;53!UBERON:0000956;1.80e-15;25!UBERON:0000203;1.80e-15;25!UBERON:0001017;2.71e-11;75!UBERON:0007023;2.95e-11;114!UBERON:0000922;1.11e-10;49!UBERON:0000955;3.29e-10;68!UBERON:0001016;3.45e-10;83!UBERON:0000125;3.57e-09;9!UBERON:0002308;3.57e-09;9!UBERON:0002420;5.64e-09;9!UBERON:0007245;5.64e-09;9!UBERON:0010009;5.64e-09;9!UBERON:0010011;5.64e-09;9!UBERON:0000454;5.64e-09;9!UBERON:0001134;8.07e-08;16!UBERON:0002036;8.07e-08;16!UBERON:0009663;1.16e-07;7 | |||
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| ||
|short_description=p1@ACTN2 | |short_description=p1@ACTN2 | ||
}} | }} |
Latest revision as of 14:35, 16 September 2015
Short description: | p1@ACTN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ACTN2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -1bp_to_ENST00000366578_5end |
EntrezGene: | ACTN2 |
HGNC: | 164 |
UniProt: | P35609 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.42e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.42e-09 | 42 |
defensive cell | 8.15e-07 | 48 |
phagocyte | 8.15e-07 | 48 |