FFCP PHASE1:Hg19::chr6:160113737..160113751,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6648 | |EntrezGene=6648 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11180 | |HGNC=11180 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-55bp_to_ENST00000540491_5end | |association_with_transcript=-55bp_to_ENST00000540491_5end | ||
|cluster_id=chr6:160113737..160113751,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_14_at_SOD2_5end | |description=CAGE_peak_14_at_SOD2_5end | ||
|id=chr6:160113737..160113751,- | |id=chr6:160113737..160113751,- | ||
|ontology_enrichment_celltype=CL:0000860;8.21e-63;33!CL:0002057;8.21e-63;33!CL:0000473;2.72e-55;39!CL:0000234;2.72e-55;39!CL:0000576;1.00e-33;48!CL:0000766;1.65e-26;69!CL:0000763;3.89e-13;100!CL:0000775;2.75e-09;3!CL:0000094;8.98e-09;8!CL:0002087;1.00e-07;104!CL:0000738;1.24e-07;136!CL:0000235;7.66e-07;6 | |ontology_enrichment_celltype=CL:0002057!4.84e-25!42;CL:0000860!5.75e-23!45;CL:0002194!2.91e-21!63;CL:0000576!2.91e-21!63;CL:0000040!2.91e-21!63;CL:0000559!2.91e-21!63;CL:0000766!1.06e-20!76;CL:0002009!5.85e-20!65;CL:0000839!7.06e-18!70;CL:0000557!1.52e-16!71;CL:0000763!7.88e-12!112;CL:0000049!7.88e-12!112;CL:0002087!5.88e-08!119;CL:0000738!8.79e-08!140 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;8.21e-63;33!CL:0002057;8.21e-63;33!CL:0000473;2.72e-55;39!CL:0000234;2.72e-55;39!CL:0000576;1.00e-33;48!CL:0000766;1.65e-26;69!CL:0000763;3.89e-13;100!CL:0000775;2.75e-09;3!CL:0000094;8.98e-09;8!CL:0002087;1.00e-07;104!CL:0000738;1.24e-07;136!CL:0000235;7.66e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.33e-68,48;CL:0000234,1.33e-68,48;CL:0000860,2.71e-63,42;CL:0002057,2.71e-63,42;CL:0000766,1.37e-55,72;CL:0002194,1.12e-52,59;CL:0000576,1.12e-52,59;CL:0000040,1.12e-52,59;CL:0000559,1.12e-52,59;CL:0002009,1.26e-50,61;CL:0000839,4.94e-46,66;CL:0000557,3.40e-45,67;CL:0000763,4.68e-35,108;CL:0000049,4.68e-35,108;CL:0000738,4.89e-24,136;CL:0002087,4.26e-22,115;CL:0002031,9.30e-21,120;CL:0002032,1.09e-19,161;CL:0000837,1.09e-19,161;CL:0000037,2.16e-18,168;CL:0000988,7.02e-17,177;CL:0000775,2.73e-09,3;CL:0000094,9.02e-09,8;CL:0000034,4.20e-07,441;CL:0000235,8.07e-07,6;CL:0000134,8.25e-07,354;CL:0000048,8.50e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;6.06e-47;42!CL:0000049;2.08e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.64e-17!102;UBERON:0003061!1.64e-17!102;UBERON:0002193!6.20e-17!112;UBERON:0002371!3.79e-15!80;UBERON:0002405!4.51e-13!115;UBERON:0004765!8.82e-13!101;UBERON:0001434!8.82e-13!101;UBERON:0001474!1.04e-12!86;UBERON:0002204!4.76e-12!167;UBERON:0007023!6.98e-12!115;UBERON:0003081!8.85e-08!216;UBERON:0000926!3.49e-07!448;UBERON:0004120!3.49e-07!448;UBERON:0006603!3.49e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.27e-41,76;UBERON:0002193,3.14e-38,108;UBERON:0002405,7.49e-38,93;UBERON:0001474,3.05e-37,82;UBERON:0002390,8.82e-37,98;UBERON:0003061,8.82e-37,98;UBERON:0001434,4.28e-34,100;UBERON:0004765,5.29e-33,90;UBERON:0002204,6.69e-23,167;UBERON:0003081,1.20e-19,203;UBERON:0000926,3.13e-12,315;UBERON:0004120,3.13e-12,315;UBERON:0006603,3.13e-12,315 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0,0,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0.123766352960047,0.662794751455832,0.672325146451775,2.41077811209591,1.46062018077475,1.46379839637152,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0.0774672005803016,0,0,1.66198622559563,1.60435557976113,1.30206522429511,0.223915474239924,0.32389366601898,0,1.01778767145695,2.26725566213286,1.4555043671269,8.59987436551033,5.75635043230556,3.71647645074124,12.0830804775303,6.91633907628572,5.20260905754887,15.5135556331478,11.6187243045089,5.41705946377367,4.70605848856512,3.82068610080984,2.02251136000576,20.2015368964796,6.73950956859797,10.2293940127847,4.94776950280074,4.3882004676759,4.26224750532694,20.3146467040009,14.7520158419696,17.4390229718761,6.78371396193207,11.4726242052444,3.69221035998698,22.3997815974346,8.83866326370155,14.5572698222807,0.211255286311942,0.850417199860174,0.209658645508376,0,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0,0,1.32171328579026,1.12101712596307,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0.50133791063589,0.724232594804119,0,1.45990461090791,0,0.221729397462564,0,0.327447688744282,0,0,0,0,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,5.27121669744253,11.6334079244498,0,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0.404132016209064,0.490385709340376,0.151357427644931,0,0,0.312160076830321,0,0,0,0,0,0,0,0.103325781175765,0,0.741800787835671,0,0,0,0,0,0,0,1.05166641234618,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0.404493924480493,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,1.58803092537181,6.01881166349594,6.84914948044554,0,0,0.246217006087397,0.234004265139238,1.48631162288728,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0.517086863031111,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,1.2162378064119,2.00902836572851,2.10833939483032,0,0,0,0.289562613335158,0.410952645100767,0.179060963239896,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0.637938751653163,8.23907726341901,11.966458368161,5.38740167466846,0.12269149171914,0,0,0.623912584592421,0.356857977594324,0,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0.431428401637234,0.426910231213777,0,0,0,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0.114814448164607,0,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0.308097234229289,0,0.275673144969061,0,0.290033387828457,0.170453254832202,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0.429374660225974,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,1.05650146756755,0,0,0,0,0.66343897524122,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0.35667105148125,0,1.89996871767898,2.30506425071931,0,0,0,0,0,0.564862804660675,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0.714695326373367,1.23408681925858,1.29694662238543,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0.318852545457645,0.199579371432817,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0.33307196799782,1.4098700508785,0.18714054040822,0.73254089635947,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0.179021174675609,0,0.493217028184668,0,0,0.969332746095218,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,1.02547850262301,0.46112780877612,0,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0.163232808159148,0.141353071433941,0.216388639742091,0,0.176915129006678,0,0,0,0.104421949505455,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.63186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.52418000472609,0.171986032471617,0,0.0730893170861856,0,0.0969890164884194,0,0.225980740780532,0,0.19871461170299,0.0633107959558787,0,0.160317640503067,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0.558564802544508,0,3.58936512288407,0.399358000997982,0.429226048136571,1.33902874465124,0.0671834724867263,0,0,0.393915911536118,0.164831716762333,0.13480708770837,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.709251365692784,0.104909176269996,0,0.35857467866569,0,0.714695326373367,1.32418394073086,0.25426853765475,0.542999601753713,0,0.326587360109409,0,0,0,0,1.17241786942466,1.32506888912221,0.387848869084652,0.66116300871345,0,0,0.533937062838473,0.3144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| ||
|short_description=p14@SOD2 | |short_description=p14@SOD2 | ||
}} | }} |
Latest revision as of 14:42, 16 September 2015
Short description: | p14@SOD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SOD2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -55bp_to_ENST00000540491_5end |
EntrezGene: | SOD2 |
HGNC: | 11180 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.33e-68 | 48 |
phagocyte | 1.33e-68 | 48 |
classical monocyte | 2.71e-63 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.71e-63 | 42 |
myeloid leukocyte | 1.37e-55 | 72 |
monopoietic cell | 1.12e-52 | 59 |
monocyte | 1.12e-52 | 59 |
monoblast | 1.12e-52 | 59 |
promonocyte | 1.12e-52 | 59 |
macrophage dendritic cell progenitor | 1.26e-50 | 61 |
myeloid lineage restricted progenitor cell | 4.94e-46 | 66 |
granulocyte monocyte progenitor cell | 3.40e-45 | 67 |
myeloid cell | 4.68e-35 | 108 |
common myeloid progenitor | 4.68e-35 | 108 |
leukocyte | 4.89e-24 | 136 |
nongranular leukocyte | 4.26e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 9.30e-21 | 120 |
hematopoietic oligopotent progenitor cell | 1.09e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.09e-19 | 161 |
hematopoietic stem cell | 2.16e-18 | 168 |
hematopoietic cell | 7.02e-17 | 177 |
neutrophil | 2.73e-09 | 3 |
granulocyte | 9.02e-09 | 8 |
stem cell | 4.20e-07 | 441 |
macrophage | 8.07e-07 | 6 |
mesenchymal cell | 8.25e-07 | 354 |
multi fate stem cell | 8.50e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.27e-41 | 76 |
hemolymphoid system | 3.14e-38 | 108 |
immune system | 7.49e-38 | 93 |
bone element | 3.05e-37 | 82 |
hematopoietic system | 8.82e-37 | 98 |
blood island | 8.82e-37 | 98 |
skeletal system | 4.28e-34 | 100 |
skeletal element | 5.29e-33 | 90 |
musculoskeletal system | 6.69e-23 | 167 |
lateral plate mesoderm | 1.20e-19 | 203 |
mesoderm | 3.13e-12 | 315 |
mesoderm-derived structure | 3.13e-12 | 315 |
presumptive mesoderm | 3.13e-12 | 315 |