FFCP PHASE1:Hg19::chr10:119302645..119302712,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2018 | |EntrezGene=2018 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3341 | |HGNC=3341 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-366bp_to_ENST00000442245_5end | |association_with_transcript=-366bp_to_ENST00000442245_5end | ||
|cluster_id=chr10:119302645..119302712,+ | |||
|description=CAGE_peak_3_at_EMX2_5end | |description=CAGE_peak_3_at_EMX2_5end | ||
|id=chr10:119302645..119302712,+ | |id=chr10:119302645..119302712,+ | ||
|ontology_enrichment_celltype=CL:0002620!7.76e-14!23;CL:0000057!8.43e-09!75;CL:0000136!7.91e-07!15 | |ontology_enrichment_celltype=CL:0002620!7.76e-14!23;CL:0000057!8.43e-09!75;CL:0000136!7.91e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002620;9.13e-21;23!CL:1000507;1.69e-10;10!CL:1000494;1.69e-10;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,7.84e-21,23;CL:1000507,1.97e-10,10;CL:1000494,1.97e-10,10;CL:0000057,1.23e-09,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.51e-07;5!DOID:450;1.51e-07;5!DOID:66;1.51e-07;5!DOID:423;1.51e-07;5!DOID:0080000;1.51e-07;5!DOID:11722;1.51e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.27e-07,5;DOID:450,1.27e-07,5;DOID:66,1.27e-07,5;DOID:423,1.27e-07,5;DOID:0080000,1.27e-07,5;DOID:11722,1.27e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.06e-26!82;UBERON:0001049!4.26e-26!57;UBERON:0005068!4.26e-26!57;UBERON:0006241!4.26e-26!57;UBERON:0007135!4.26e-26!57;UBERON:0003080!6.31e-26!42;UBERON:0002780!1.30e-25!41;UBERON:0001890!1.30e-25!41;UBERON:0006240!1.30e-25!41;UBERON:0001893!1.68e-25!34;UBERON:0005743!2.05e-25!86;UBERON:0002020!2.74e-25!34;UBERON:0003528!2.74e-25!34;UBERON:0002616!6.13e-25!59;UBERON:0002791!6.35e-25!33;UBERON:0001869!1.97e-24!32;UBERON:0000955!5.46e-23!69;UBERON:0006238!5.46e-23!69;UBERON:0000073!1.96e-22!94;UBERON:0001016!1.96e-22!94;UBERON:0000475!2.24e-22!365;UBERON:0003056!4.12e-21!61;UBERON:0007023!5.87e-20!115;UBERON:0000956!1.39e-19!25;UBERON:0000203!1.39e-19!25;UBERON:0003075!2.36e-19!86;UBERON:0007284!2.36e-19!86;UBERON:0002346!2.80e-19!90;UBERON:0002619!3.30e-17!22;UBERON:0001950!1.50e-15!20;UBERON:0002199!2.05e-15!45;UBERON:0002416!2.05e-15!45;UBERON:0000924!1.11e-13!173;UBERON:0006601!1.11e-13!173;UBERON:0000033!1.16e-13!123;UBERON:0000153!1.62e-13!129;UBERON:0007811!1.62e-13!129;UBERON:0004121!1.70e-13!169;UBERON:0002097!1.19e-12!40;UBERON:0003102!2.17e-08!95;UBERON:0001013!5.25e-08!14;UBERON:0000064!1.20e-07!219;UBERON:0002420!1.35e-07!9;UBERON:0007245!1.35e-07!9;UBERON:0010009!1.35e-07!9;UBERON:0010011!1.35e-07!9;UBERON:0000454!1.35e-07!9;UBERON:0000468!2.29e-07!659;UBERON:0002308!3.80e-07!9;UBERON:0000125!3.80e-07!9;UBERON:0001871!7.11e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.91e-33;32!UBERON:0002791;5.72e-33;32!UBERON:0001893;7.94e-33;34!UBERON:0003528;1.13e-32;34!UBERON:0002020;1.13e-32;34!UBERON:0000956;7.12e-29;25!UBERON:0000203;7.12e-29;25!UBERON:0002780;7.30e-26;41!UBERON:0001890;7.30e-26;41!UBERON:0002619;3.20e-25;22!UBERON:0001950;9.45e-23;20!UBERON:0000073;1.34e-16;53!UBERON:0002616;1.34e-16;53!UBERON:0001017;3.64e-12;75!UBERON:0000955;6.23e-12;68!UBERON:0002199;4.67e-11;46!UBERON:0002416;4.67e-11;46!UBERON:0002420;1.11e-10;9!UBERON:0007245;1.11e-10;9!UBERON:0010009;1.11e-10;9!UBERON:0010011;1.11e-10;9!UBERON:0000454;1.11e-10;9!UBERON:0004211;1.69e-10;10!UBERON:0009773;1.69e-10;10!UBERON:0001231;1.69e-10;10!UBERON:0004810;1.69e-10;10!UBERON:0000125;2.94e-10;9!UBERON:0002308;2.94e-10;9!UBERON:0003102;6.78e-10;50!UBERON:0001016;1.57e-09;83!UBERON:0002097;2.37e-09;41!UBERON:0009663;1.15e-08;7!UBERON:0001871;2.80e-08;6!UBERON:0000200;1.33e-07;6!UBERON:0000349;5.28e-07;5!UBERON:0002021;5.71e-07;5!UBERON:0001872;7.49e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001893,5.98e-38,34;UBERON:0003528,1.25e-37,34;UBERON:0002020,1.25e-37,34;UBERON:0001869,2.53e-36,32;UBERON:0002791,4.51e-36,32;UBERON:0002780,8.39e-36,41;UBERON:0001890,8.39e-36,41;UBERON:0003080,8.39e-36,41;UBERON:0006240,8.39e-36,41;UBERON:0000073,1.65e-29,53;UBERON:0002616,1.65e-29,53;UBERON:0000956,6.17e-29,25;UBERON:0000203,6.17e-29,25;UBERON:0003056,1.05e-28,61;UBERON:0001017,4.42e-28,81;UBERON:0001049,3.15e-27,56;UBERON:0005068,3.15e-27,56;UBERON:0006241,3.15e-27,56;UBERON:0007135,3.15e-27,56;UBERON:0002619,2.56e-25,22;UBERON:0000955,7.76e-25,68;UBERON:0006238,7.76e-25,68;UBERON:0001016,8.88e-25,89;UBERON:0001950,8.56e-23,20;UBERON:0003075,5.41e-21,82;UBERON:0007284,5.41e-21,82;UBERON:0002346,1.01e-20,86;UBERON:0007023,6.62e-18,114;UBERON:0010371,1.99e-15,104;UBERON:0002199,3.33e-15,46;UBERON:0002416,3.33e-15,46;UBERON:0010314,1.05e-13,132;UBERON:0002097,1.88e-12,41;UBERON:0004121,5.20e-12,171;UBERON:0000924,5.20e-12,171;UBERON:0006601,5.20e-12,171;UBERON:0002420,1.01e-10,9;UBERON:0007245,1.01e-10,9;UBERON:0010009,1.01e-10,9;UBERON:0010011,1.01e-10,9;UBERON:0000454,1.01e-10,9;UBERON:0004810,1.97e-10,10;UBERON:0000125,4.81e-10,9;UBERON:0002308,4.81e-10,9;UBERON:0001871,1.47e-08,6;UBERON:0009663,1.51e-08,7;UBERON:0002113,5.63e-08,26;UBERON:0003918,5.63e-08,26;UBERON:0011143,5.63e-08,26;UBERON:0005095,5.63e-08,26;UBERON:0007687,5.63e-08,26;UBERON:0000200,1.47e-07,6;UBERON:0000349,2.71e-07,5;UBERON:0006555,2.96e-07,16;UBERON:0004819,2.96e-07,16;UBERON:0002021,4.20e-07,5;UBERON:0000489,6.12e-07,31 | |||
|phase1_expression=1.81678379270557,2.35510576280081,0.422863212287913,5.00366491765652,0,5.23403114460221,5.06599756336621,0.631719873426831,3.13422753839806,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29353980696585,5.06435372769671,3.64073654824928,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,2.3858578411533,0,0,0,0,2.29213382120997,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,4.47274756525787,0,0,0,0,0,0,0,0,0.134710672069688,0,1.05950199351452,0.576175924479999,0.70296429550139,1.87296046098192,2.85235910772225,2.24173020827702,2.23125547423153,1.29498355494505,1.26405726032024,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0.500474079487857,0,0,0,0,0,3.7671823494661,4.48470516518992,5.72216133130817,4.80145753735044,3.40073346486848,2.06112432036503,2.04728541964749,3.88185564154912,6.04109431999431,5.55354303337052,8.00834118188004,2.90962902273861,6.39017266529906,4.73534861669909,1.69560592310488,0,0,0,0.243947412259191,0,0,1.65857688024593,0.756962552626885,0,0,0.643240938192885,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.857839051492628,0.878002283269004,0,0.804231779293047,0,1.3032332212413,3.11980435583874,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.7333828582095,0.258543431515556,0,0.845302752556,6.11657668145202,11.4408180602503,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.868687840005475,0.205476322550383,0,0,0,0,0,9.65559572045361,5.20559415430487,3.86644406388848,3.35032530668698,5.10351001322531,0,0,0,0,0,0,0,0,0,0,0.902838299183157,0,0,0,0.184369168541703,0.695068915744663,0.195801157462741,0,0,0,0,0,0,0,0.496215615637554,1.2276957863045,4.2099014164961,0.256278298511402,1.53512174720011,0,1.48418066444991,1.85051632563187,2.84098760501003,0.821271560138091,0,3.02146983995894,0.483437798366489,0.40101294060657,0,0,0,0.262248829918848,4.06079651616671,1.46329140498388,3.13739907670742,2.92278449306521,2.11103257785751,0,0,0.215915916102139,0,1.35473218771926,3.51182841698397,2.29388645740534,1.66215201785745,1.34324852833307,0,0,0,0,0,0.309123034943167,0,0,0.574265537996172,0,0,1.35339005608971,0.770243085573222,1.22802939780904,0.551346289938122,0.966782203814463,1.0151168573996,1.27839941124151,1.69160867728801,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0.949138274156178,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0.0982490410131212,0.35667105148125,2.48332744849418,2.74439925886963,0.987884678879706,3.03578539012572,4.19921664293979,0,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,3.97659059106519,2.95405774462077,0,0,0,0,0,0,0,0,5.90975216557434,0,0,0,1.479651084554,0,0,3.87733098438087,2.96857914117924,1.99613798001194,0,0,0.724999575434793,0,0.254253650292766,0,0.689486746482929,2.33283690706603,0.868124974666461,7.97167247232455,4.22087535188928,0,0.331737779793674,0.886642856860642,3.29078095730959,0,0,7.00247352384553,0,0,0,0,0.31900115973192,2.93112298885959,0,0,0,0.166211681900156,0,0,0,0,0,0.210998064528027,0,0,0.865554558968364,0,0.176915129006678,0,0,0,0,2.76344645220776,4.81546588379273,2.34264445725339,0,0.19566461893209,0,12.6267008911805,1.20990716048664,2.75465485467441,1.01098527405581,0.901940516486955,0,0,0,0,0,0,0,0.694238953340524,0,0,7.33852006616527,1.20390222730132,0,0,0,0.484945082442097,0,1.58186518546373,0,0,2.15256706249988,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0.124252535565433,0.235694034616795,0.271808412147228,0.104602846312333,0,0,2.40168115483916,1.09524303113594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.36183751847443,3.94989877723569,0,0,0,0,0,2.30848315300494,0.335434687599266,5.20117668174708,3.77673034571986,0,0,0,0,0,23.1384369265822,5.97299561929084,0.864221491201268,6.85833456229759,0,0,0,0,0,0,2.58565912723101,1.05786081394152,0,0,0,0,0,0.992332043623902,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0,0.157054096250234,2.65820453990096,4.39294553647067,3.254964198369,1.72022758707021,0.998361463831671,0.558867626472451,0,0,0,0,0,0,0.579684114443301,2.23882204330311,2.80455971816669,1.66441758450784,0,0.251567901752575,0,0,0,0,0,1.11507737014592,0,1.08684069813382,0,0,3.65221543268214,0,0,0,0.545545977607678,0.644463342254931,0,2.78667122089031,0,8.24149692438703,16.1639754607641,0,0,0,0.260994291965212,0,0,0,3.93995450379272,0.308801447160972,0,0,0,0,0.256241518587947,0,0,2.76516872303461,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|short_description=p3@EMX2 | |short_description=p3@EMX2 | ||
}} | }} |
Latest revision as of 15:54, 16 September 2015
Short description: | p3@EMX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EMX2_5end |
Coexpression cluster: | NA |
Association with transcript: | -366bp_to_ENST00000442245_5end |
EntrezGene: | EMX2 |
HGNC: | 3341 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 7.84e-21 | 23 |
kidney tubule cell | 1.97e-10 | 10 |
nephron tubule epithelial cell | 1.97e-10 | 10 |
fibroblast | 1.23e-09 | 76 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.27e-07 | 5 |
myotonic disease | 1.27e-07 | 5 |
muscle tissue disease | 1.27e-07 | 5 |
myopathy | 1.27e-07 | 5 |
muscular disease | 1.27e-07 | 5 |
myotonic dystrophy | 1.27e-07 | 5 |