FFCP PHASE1:Hg19::chr12:117537211..117537228,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:117537211..117537228,- to FFCP PHASE1:Hg19::chr12:117537211..117537228,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54997 | |EntrezGene=54997 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26065 | |HGNC=26065 | ||
|TSSclassifier=strong | |||
|UniProt=E9PQ58 | |UniProt=E9PQ58 | ||
|association_with_transcript=0bp_to_ENST00000462502_5end | |||
|cluster_id=chr12:117537211..117537228,- | |||
|description=CAGE_peak_1_at_TESC_5end | |||
|id=chr12:117537211..117537228,- | |||
|ontology_enrichment_celltype=CL:0000037!9.55e-38!172;CL:0000566!9.55e-38!172;CL:0002032!3.53e-37!165;CL:0000837!3.53e-37!165;CL:0000988!1.57e-35!182;CL:0000763!2.26e-32!112;CL:0000049!2.26e-32!112;CL:0000738!3.22e-22!140;CL:0002031!2.20e-21!124;CL:0002087!2.16e-19!119;CL:0000766!1.12e-18!76;CL:0000839!5.51e-18!70;CL:0002057!4.73e-17!42;CL:0000557!1.53e-16!71;CL:0000860!1.84e-16!45;CL:0002194!4.86e-14!63;CL:0000576!4.86e-14!63;CL:0000040!4.86e-14!63;CL:0000559!4.86e-14!63;CL:0002009!2.60e-13!65 | |||
|ontology_enrichment_celltype_v019=CL:0000763;2.06e-12;100!CL:0000860;2.20e-12;33!CL:0002057;2.20e-12;33!CL:0000576;8.80e-12;48!CL:0000473;7.89e-11;39!CL:0000234;7.89e-11;39!CL:0000766;8.44e-11;69!CL:0000988;1.96e-07;177!CL:0002087;1.98e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.13e-39,168;CL:0002032,6.99e-39,161;CL:0000837,6.99e-39,161;CL:0000988,4.21e-37,177;CL:0000763,4.16e-34,108;CL:0000049,4.16e-34,108;CL:0002031,8.89e-23,120;CL:0000738,1.71e-22,136;CL:0002087,6.72e-21,115;CL:0000766,1.05e-20,72;CL:0000839,5.50e-20,66;CL:0000473,1.14e-18,48;CL:0000234,1.14e-18,48;CL:0000860,1.40e-18,42;CL:0002057,1.40e-18,42;CL:0000557,5.68e-18,67;CL:0002194,1.48e-15,59;CL:0000576,1.48e-15,59;CL:0000040,1.48e-15,59;CL:0000559,1.48e-15,59;CL:0002009,2.26e-14,61 | |||
|ontology_enrichment_development_v019=CL:0002057;1.26e-13;42!CL:0000049;5.66e-10;108 | |||
|ontology_enrichment_disease=DOID:8692!5.45e-14!31;DOID:1240!1.00e-13!39;DOID:2531!4.18e-12!51;DOID:0060083!4.18e-12!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.25e-14;31!DOID:1240;1.23e-11;39!DOID:2531;3.03e-09;51!DOID:0060083;3.03e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.24e-15,31;DOID:1240,3.50e-15,39;DOID:2531,8.69e-14,51;DOID:0060083,8.69e-14,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.55e-36!115;UBERON:0002390!1.06e-20!102;UBERON:0003061!1.06e-20!102;UBERON:0002193!1.35e-17!112;UBERON:0001049!4.69e-13!57;UBERON:0005068!4.69e-13!57;UBERON:0006241!4.69e-13!57;UBERON:0007135!4.69e-13!57;UBERON:0002371!5.81e-13!80;UBERON:0003080!1.87e-12!42;UBERON:0002780!2.82e-12!41;UBERON:0001890!2.82e-12!41;UBERON:0006240!2.82e-12!41;UBERON:0001474!1.25e-11!86;UBERON:0001893!2.77e-11!34;UBERON:0001869!4.32e-11!32;UBERON:0002020!4.99e-11!34;UBERON:0003528!4.99e-11!34;UBERON:0002791!6.63e-11!33;UBERON:0002405!3.46e-10!115;UBERON:0002616!6.67e-10!59;UBERON:0001017!1.96e-09!82;UBERON:0002619!6.55e-09!22;UBERON:0000955!8.62e-09!69;UBERON:0006238!8.62e-09!69;UBERON:0000178!1.06e-08!15;UBERON:0000179!1.06e-08!15;UBERON:0000463!1.06e-08!15;UBERON:0005743!1.26e-08!86;UBERON:0001950!4.16e-08!20;UBERON:0000956!4.86e-08!25;UBERON:0000203!4.86e-08!25;UBERON:0004765!1.77e-07!101;UBERON:0001434!1.77e-07!101;UBERON:0000073!1.94e-07!94;UBERON:0001016!1.94e-07!94;UBERON:0003075!5.42e-07!86;UBERON:0007284!5.42e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.33e-10;114!UBERON:0001869;9.39e-10;32!UBERON:0002619;1.18e-09;22!UBERON:0001893;1.43e-09;34!UBERON:0002791;1.83e-09;32!UBERON:0000178;2.22e-09;15!UBERON:0000179;2.22e-09;15!UBERON:0000463;2.22e-09;15!UBERON:0003528;2.54e-09;34!UBERON:0002020;2.54e-09;34!UBERON:0002780;3.83e-09;41!UBERON:0001890;3.83e-09;41!UBERON:0001950;8.96e-09;20!UBERON:0000956;1.63e-07;25!UBERON:0000203;1.63e-07;25!UBERON:0000073;6.77e-07;53!UBERON:0002616;6.77e-07;53 | |||
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| ||
|short_description=p1@TESC | |||
}} | }} |
Latest revision as of 16:20, 16 September 2015
Short description: | p1@TESC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TESC_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000462502_5end |
EntrezGene: | TESC |
HGNC: | 26065 |
UniProt: | E9PQ58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.13e-39 | 168 |
hematopoietic oligopotent progenitor cell | 6.99e-39 | 161 |
hematopoietic multipotent progenitor cell | 6.99e-39 | 161 |
hematopoietic cell | 4.21e-37 | 177 |
myeloid cell | 4.16e-34 | 108 |
common myeloid progenitor | 4.16e-34 | 108 |
hematopoietic lineage restricted progenitor cell | 8.89e-23 | 120 |
leukocyte | 1.71e-22 | 136 |
nongranular leukocyte | 6.72e-21 | 115 |
myeloid leukocyte | 1.05e-20 | 72 |
myeloid lineage restricted progenitor cell | 5.50e-20 | 66 |
defensive cell | 1.14e-18 | 48 |
phagocyte | 1.14e-18 | 48 |
classical monocyte | 1.40e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.40e-18 | 42 |
granulocyte monocyte progenitor cell | 5.68e-18 | 67 |
monopoietic cell | 1.48e-15 | 59 |
monocyte | 1.48e-15 | 59 |
monoblast | 1.48e-15 | 59 |
promonocyte | 1.48e-15 | 59 |
macrophage dendritic cell progenitor | 2.26e-14 | 61 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.89e-39 | 114 |
hematopoietic system | 3.45e-23 | 98 |
blood island | 3.45e-23 | 98 |
hemolymphoid system | 8.54e-20 | 108 |
bone marrow | 1.51e-14 | 76 |
immune system | 3.74e-13 | 93 |
bone element | 2.92e-12 | 82 |
regional part of forebrain | 4.10e-12 | 41 |
forebrain | 4.10e-12 | 41 |
anterior neural tube | 4.10e-12 | 41 |
future forebrain | 4.10e-12 | 41 |
neural tube | 6.14e-12 | 56 |
neural rod | 6.14e-12 | 56 |
future spinal cord | 6.14e-12 | 56 |
neural keel | 6.14e-12 | 56 |
regional part of nervous system | 1.38e-11 | 53 |
regional part of brain | 1.38e-11 | 53 |
telencephalon | 5.57e-11 | 34 |
cerebral hemisphere | 9.57e-11 | 32 |
brain grey matter | 1.02e-10 | 34 |
gray matter | 1.02e-10 | 34 |
regional part of telencephalon | 2.55e-10 | 32 |
regional part of cerebral cortex | 1.23e-09 | 22 |
blood | 2.09e-09 | 15 |
haemolymphatic fluid | 2.09e-09 | 15 |
organism substance | 2.09e-09 | 15 |
skeletal element | 2.63e-09 | 90 |
neocortex | 9.38e-09 | 20 |
central nervous system | 1.02e-08 | 81 |
brain | 3.44e-08 | 68 |
future brain | 3.44e-08 | 68 |
cerebral cortex | 1.69e-07 | 25 |
pallium | 1.69e-07 | 25 |
nervous system | 2.35e-07 | 89 |
skeletal system | 5.34e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.24e-15 | 31 |
leukemia | 3.50e-15 | 39 |
hematologic cancer | 8.69e-14 | 51 |
immune system cancer | 8.69e-14 | 51 |