FFCP PHASE1:Hg19::chr10:121410963..121410976,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:121410963..121410976,+
|short_description=p4@BAG3
|description=CAGE_peak_4_at_BAG3_5end
|association_with_transcript=81bp_to_ENST00000369085,NM_004281,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9531 | |EntrezGene=9531 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=939 | |HGNC=939 | ||
|TSSclassifier=strong | |||
|UniProt=O95817 | |UniProt=O95817 | ||
|association_with_transcript=81bp_to_ENST00000369085,NM_004281,uc001lel.2,uc001lem.2_5end | |||
|cluster_id=chr10:121410963..121410976,+ | |||
|description=CAGE_peak_4_at_BAG3_5end | |||
|id=chr10:121410963..121410976,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.71e-17!180;CL:0000057!2.21e-11!75;CL:0000222!7.12e-10!119;CL:0000183!9.32e-09!59;CL:0000220!1.57e-08!246;CL:0000680!1.76e-08!57;CL:0000056!1.76e-08!57;CL:0000355!1.76e-08!57;CL:0002321!3.65e-08!248;CL:0000192!4.68e-08!42;CL:0000514!4.68e-08!42;CL:0000187!1.08e-07!54;CL:0000359!6.02e-07!32 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.02e-11,76;CL:0000222,8.49e-10,121;CL:0000680,1.07e-08,58;CL:0000056,1.07e-08,58;CL:0000355,1.07e-08,58;CL:0000192,2.95e-08,43;CL:0000514,2.95e-08,43;CL:0000187,6.80e-08,55;CL:0002321,9.29e-08,250;CL:0000359,6.09e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.13e-17!365;UBERON:0000468!1.04e-16!659;UBERON:0000467!1.22e-16!625;UBERON:0000480!2.60e-16!626;UBERON:0002100!3.21e-15!216;UBERON:0005256!5.04e-14!143;UBERON:0004111!2.56e-12!241;UBERON:0003914!2.58e-12!118;UBERON:0000119!2.63e-12!312;UBERON:0000483!1.68e-11!309;UBERON:0000914!1.75e-11!83;UBERON:0002329!1.75e-11!83;UBERON:0003077!1.75e-11!83;UBERON:0003059!1.75e-11!83;UBERON:0007282!1.75e-11!83;UBERON:0009618!1.75e-11!83;UBERON:0007285!1.75e-11!83;UBERON:0003102!2.46e-11!95;UBERON:0000486!2.49e-11!82;UBERON:0004872!6.27e-11!84;UBERON:0004290!6.68e-11!70;UBERON:0000477!7.80e-11!286;UBERON:0000923!1.08e-10!604;UBERON:0005291!1.08e-10!604;UBERON:0006598!1.08e-10!604;UBERON:0002532!1.08e-10!604;UBERON:0000926!1.64e-10!448;UBERON:0004120!1.64e-10!448;UBERON:0006603!1.64e-10!448;UBERON:0001981!1.75e-10!60;UBERON:0007500!1.75e-10!60;UBERON:0004537!1.75e-10!60;UBERON:0006965!1.75e-10!60;UBERON:0002050!1.84e-10!605;UBERON:0005423!1.84e-10!605;UBERON:0002049!2.86e-10!79;UBERON:0007798!2.86e-10!79;UBERON:0001134!4.30e-10!61;UBERON:0002036!4.30e-10!61;UBERON:0003082!4.30e-10!61;UBERON:0002385!5.29e-10!63;UBERON:0001015!5.29e-10!63;UBERON:0000383!5.29e-10!63;UBERON:0000922!1.15e-09!612;UBERON:0000490!1.52e-09!138;UBERON:0000055!1.80e-09!69;UBERON:0001637!2.05e-09!42;UBERON:0003509!2.05e-09!42;UBERON:0004572!2.05e-09!42;UBERON:0003104!4.38e-09!238;UBERON:0009142!4.38e-09!238;UBERON:0000062!1.65e-08!511;UBERON:0000025!3.13e-08!194;UBERON:0000481!3.45e-08!347;UBERON:0003103!5.56e-08!69;UBERON:0004573!1.72e-07!33;UBERON:0004571!1.72e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.90e-07;42!UBERON:0003509;1.90e-07;42!UBERON:0004572;1.90e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,2.71e-13,122;UBERON:0007503,4.22e-13,78;UBERON:0002100,1.03e-12,199;UBERON:0003914,4.59e-12,117;UBERON:0000119,6.04e-12,309;UBERON:0004111,1.10e-11,240;UBERON:0003102,1.37e-11,99;UBERON:0000486,1.73e-11,83;UBERON:0003104,2.11e-11,160;UBERON:0009142,2.11e-11,160;UBERON:0002329,3.71e-11,71;UBERON:0003059,3.71e-11,71;UBERON:0007282,3.71e-11,71;UBERON:0004290,3.71e-11,71;UBERON:0009618,3.71e-11,71;UBERON:0000483,3.81e-11,306;UBERON:0007524,3.95e-11,73;UBERON:0004872,6.54e-11,83;UBERON:0003077,7.03e-11,72;UBERON:0007285,7.03e-11,72;UBERON:0007500,1.53e-10,59;UBERON:0001981,1.53e-10,59;UBERON:0004537,1.53e-10,59;UBERON:0006965,1.53e-10,59;UBERON:0000490,2.00e-10,148;UBERON:0001134,2.48e-10,62;UBERON:0002036,2.48e-10,62;UBERON:0003082,2.48e-10,62;UBERON:0000926,2.85e-10,315;UBERON:0004120,2.85e-10,315;UBERON:0006603,2.85e-10,315;UBERON:0002385,3.04e-10,64;UBERON:0001015,3.04e-10,64;UBERON:0000383,3.04e-10,64;UBERON:0000923,3.18e-10,560;UBERON:0010316,3.18e-10,560;UBERON:0005291,3.18e-10,560;UBERON:0006598,3.18e-10,560;UBERON:0010317,3.18e-10,560;UBERON:0002532,3.18e-10,560;UBERON:0005423,4.07e-10,581;UBERON:0002049,4.11e-10,78;UBERON:0007798,4.11e-10,78;UBERON:0002050,6.42e-10,564;UBERON:0001637,1.92e-09,42;UBERON:0003509,1.92e-09,42;UBERON:0004572,1.92e-09,42;UBERON:0000055,2.54e-09,68;UBERON:0000922,3.51e-09,592;UBERON:0003103,1.15e-07,68;UBERON:0000025,1.57e-07,192;UBERON:0004573,1.72e-07,33;UBERON:0004571,1.72e-07,33;UBERON:0001009,7.17e-07,112 | |||
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| ||
|short_description=p4@BAG3 | |||
}} | }} |
Latest revision as of 17:56, 16 September 2015
Short description: | p4@BAG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BAG3_5end |
Coexpression cluster: | NA |
Association with transcript: | 81bp_to_ENST00000369085, NM_004281, uc001lel.2, uc001lem.2_5end |
EntrezGene: | BAG3 |
HGNC: | 939 |
UniProt: | O95817 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.02e-11 | 76 |
mesodermal cell | 8.49e-10 | 121 |
muscle precursor cell | 1.07e-08 | 58 |
myoblast | 1.07e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.07e-08 | 58 |
smooth muscle cell | 2.95e-08 | 43 |
smooth muscle myoblast | 2.95e-08 | 43 |
muscle cell | 6.80e-08 | 55 |
embryonic cell | 9.29e-08 | 250 |
vascular associated smooth muscle cell | 6.09e-07 | 32 |