FFCP PHASE1:Hg19::chr3:173115337..173115361,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:173115337..173115361,+
|short_description=p3@NLGN1
|description=CAGE_peak_3_at_NLGN1_5end
|association_with_transcript=-208bp_to_ENST00000413821_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22871 | |EntrezGene=22871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14291 | |HGNC=14291 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-208bp_to_ENST00000413821_5end | |||
|cluster_id=chr3:173115337..173115361,+ | |||
|description=CAGE_peak_3_at_NLGN1_5end | |||
|id=chr3:173115337..173115361,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.38e-08!8;CL:0000071!1.06e-07!18;CL:0002546!1.06e-07!18;CL:0002319!3.04e-07!25;CL:0000133!6.07e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000540;7.98e-13;6!CL:0000404;7.98e-13;6!CL:0002319;6.67e-10;25!CL:0002605;2.56e-08;3!CL:0000064;4.58e-08;3!CL:0000067;4.58e-08;3!CL:0005012;4.58e-08;3!CL:0002304;4.58e-08;3!CL:0002618;6.57e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.09e-18,8;CL:0000540,2.54e-13,6;CL:0000031,2.54e-13,6;CL:0000404,2.54e-13,6;CL:0002319,4.05e-10,25;CL:0002605,2.62e-08,3;CL:0000064,5.21e-08,3;CL:0000067,5.21e-08,3;CL:0005012,5.21e-08,3;CL:0002304,5.21e-08,3;CL:0002618,4.26e-07,3;CL:0000133,5.90e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;7.98e-13;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!9.09e-34!86;UBERON:0001017!1.06e-32!82;UBERON:0000073!3.70e-32!94;UBERON:0001016!3.70e-32!94;UBERON:0003075!4.75e-31!86;UBERON:0007284!4.75e-31!86;UBERON:0001049!1.34e-30!57;UBERON:0005068!1.34e-30!57;UBERON:0006241!1.34e-30!57;UBERON:0007135!1.34e-30!57;UBERON:0002346!1.60e-28!90;UBERON:0001893!1.86e-27!34;UBERON:0002020!4.21e-27!34;UBERON:0003528!4.21e-27!34;UBERON:0002791!1.09e-26!33;UBERON:0001869!3.16e-26!32;UBERON:0002616!4.36e-25!59;UBERON:0002780!5.08e-25!41;UBERON:0001890!5.08e-25!41;UBERON:0006240!5.08e-25!41;UBERON:0003080!4.59e-24!42;UBERON:0000955!7.78e-24!69;UBERON:0006238!7.78e-24!69;UBERON:0003056!8.81e-24!61;UBERON:0000956!1.20e-20!25;UBERON:0000203!1.20e-20!25;UBERON:0004121!2.15e-19!169;UBERON:0000924!2.93e-18!173;UBERON:0006601!2.93e-18!173;UBERON:0001950!3.69e-18!20;UBERON:0002619!8.32e-18!22;UBERON:0007023!1.52e-17!115;UBERON:0000033!8.06e-16!123;UBERON:0000153!1.35e-14!129;UBERON:0007811!1.35e-14!129;UBERON:0000025!1.83e-11!194;UBERON:0000483!2.89e-10!309;UBERON:0000119!7.36e-10!312;UBERON:0002420!9.41e-09!9;UBERON:0007245!9.41e-09!9;UBERON:0010009!9.41e-09!9;UBERON:0010011!9.41e-09!9;UBERON:0000454!9.41e-09!9;UBERON:0004111!1.46e-08!241;UBERON:0001871!2.73e-08!7;UBERON:0002308!7.11e-08!9;UBERON:0000125!7.11e-08!9;UBERON:0003076!1.05e-07!15;UBERON:0003057!1.05e-07!15;UBERON:0001986!1.06e-07!18;UBERON:0004638!1.06e-07!18;UBERON:0004852!1.06e-07!18;UBERON:0000475!1.80e-07!365;UBERON:0000477!2.19e-07!286;UBERON:0000468!2.42e-07!659;UBERON:0009663!6.64e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.91e-39;32!UBERON:0002791;9.25e-38;32!UBERON:0001893;6.50e-35;34!UBERON:0003528;1.25e-34;34!UBERON:0002020;1.25e-34;34!UBERON:0000956;1.33e-30;25!UBERON:0000203;1.33e-30;25!UBERON:0002780;2.32e-28;41!UBERON:0001890;2.32e-28;41!UBERON:0002619;1.64e-24;22!UBERON:0001950;6.69e-24;20!UBERON:0000073;2.75e-18;53!UBERON:0002616;2.75e-18;53!UBERON:0001871;4.52e-15;6!UBERON:0002420;1.18e-14;9!UBERON:0007245;1.18e-14;9!UBERON:0010009;1.18e-14;9!UBERON:0010011;1.18e-14;9!UBERON:0000454;1.18e-14;9!UBERON:0001017;3.69e-14;75!UBERON:0000955;2.82e-12;68!UBERON:0001016;6.03e-12;83!UBERON:0000125;6.24e-11;9!UBERON:0002308;6.24e-11;9!UBERON:0009663;1.03e-10;7!UBERON:0000369;3.99e-09;4!UBERON:0002435;3.99e-09;4!UBERON:0000204;3.99e-09;4!UBERON:0000922;2.03e-08;49!UBERON:0001778;4.58e-08;3!UBERON:0001775;4.58e-08;3!UBERON:0000349;1.21e-07;5!UBERON:0002021;1.27e-07;5!UBERON:0005383;2.28e-07;3!UBERON:0005382;2.28e-07;3!UBERON:0007625;6.91e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.33e-43,32;UBERON:0003528,1.19e-40,34;UBERON:0002020,1.19e-40,34;UBERON:0001893,1.23e-40,34;UBERON:0002791,2.36e-40,32;UBERON:0001017,1.39e-39,81;UBERON:0002780,4.79e-38,41;UBERON:0001890,4.79e-38,41;UBERON:0003080,4.79e-38,41;UBERON:0006240,4.79e-38,41;UBERON:0003056,1.52e-37,61;UBERON:0001016,1.77e-34,89;UBERON:0001049,3.47e-32,56;UBERON:0005068,3.47e-32,56;UBERON:0006241,3.47e-32,56;UBERON:0007135,3.47e-32,56;UBERON:0000073,3.95e-32,53;UBERON:0002616,3.95e-32,53;UBERON:0000956,4.59e-31,25;UBERON:0000203,4.59e-31,25;UBERON:0003075,1.05e-30,82;UBERON:0007284,1.05e-30,82;UBERON:0002346,8.98e-29,86;UBERON:0000955,1.42e-26,68;UBERON:0006238,1.42e-26,68;UBERON:0002619,5.93e-25,22;UBERON:0010371,7.09e-25,104;UBERON:0001950,2.20e-24,20;UBERON:0004121,1.22e-23,171;UBERON:0000924,1.22e-23,171;UBERON:0006601,1.22e-23,171;UBERON:0010314,1.92e-18,132;UBERON:0001871,2.06e-15,6;UBERON:0002420,7.66e-15,9;UBERON:0007245,7.66e-15,9;UBERON:0010009,7.66e-15,9;UBERON:0010011,7.66e-15,9;UBERON:0000454,7.66e-15,9;UBERON:0000125,6.65e-11,9;UBERON:0002308,6.65e-11,9;UBERON:0009663,1.08e-10,7;UBERON:0011216,2.15e-10,223;UBERON:0000025,2.16e-09,192;UBERON:0000369,4.27e-09,4;UBERON:0002435,4.27e-09,4;UBERON:0000204,4.27e-09,4;UBERON:0010082,4.27e-09,4;UBERON:0001778,5.21e-08,3;UBERON:0001775,5.21e-08,3;UBERON:0002021,6.76e-08,5;UBERON:0000349,1.20e-07,5;UBERON:0005383,1.53e-07,3;UBERON:0005382,1.53e-07,3;UBERON:0007625,9.27e-07,11 | |||
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| ||
|short_description=p3@NLGN1 | |||
}} | }} |
Latest revision as of 18:59, 16 September 2015
Short description: | p3@NLGN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NLGN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -208bp_to_ENST00000413821_5end |
EntrezGene: | NLGN1 |
HGNC: | 14291 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.09e-18 | 8 |
neuron | 2.54e-13 | 6 |
neuroblast | 2.54e-13 | 6 |
electrically signaling cell | 2.54e-13 | 6 |
neural cell | 4.05e-10 | 25 |
astrocyte of the cerebral cortex | 2.62e-08 | 3 |
ciliated cell | 5.21e-08 | 3 |
ciliated epithelial cell | 5.21e-08 | 3 |
multi-ciliated epithelial cell | 5.21e-08 | 3 |
non-pigmented ciliary epithelial cell | 5.21e-08 | 3 |
endothelial cell of umbilical vein | 4.26e-07 | 3 |
neurectodermal cell | 5.90e-07 | 59 |