FFCP PHASE1:Hg19::chr1:245133025..245133057,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84288 | |EntrezGene=84288 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28166 | |HGNC=28166 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000518607_5end | |association_with_transcript=0bp_to_ENST00000518607_5end | ||
|cluster_id=chr1:245133025..245133057,+ | |||
|coexpression_cluster_id=C22 | |coexpression_cluster_id=C22 | ||
|description=CAGE_peak_6_at_EFCAB2_5end | |description=CAGE_peak_6_at_EFCAB2_5end | ||
|id=chr1:245133025..245133057,+ | |id=chr1:245133025..245133057,+ | ||
|ontology_enrichment_celltype=CL:0000738!6.08e-30!140;CL:0000037!2.86e-26!172;CL:0000566!2.86e-26!172;CL:0002087!1.27e-25!119;CL:0002031!1.21e-24!124;CL:0002057!2.07e-24!42;CL:0002032!1.05e-23!165;CL:0000837!1.05e-23!165;CL:0000988!5.94e-22!182;CL:0000860!7.67e-22!45;CL:0000557!2.28e-16!71;CL:0000766!2.70e-16!76;CL:0002009!8.52e-15!65;CL:0002194!8.32e-14!63;CL:0000576!8.32e-14!63;CL:0000040!8.32e-14!63;CL:0000559!8.32e-14!63;CL:0000839!1.01e-13!70;CL:0000763!2.94e-13!112;CL:0000049!2.94e-13!112;CL:0000542!1.79e-10!53;CL:0000051!1.79e-10!53;CL:0000838!4.02e-10!52;CL:0000134!3.35e-08!358;CL:0002320!6.11e-08!365;CL:0002393!1.16e-07!9;CL:0002397!1.16e-07!9;CL:0000084!2.36e-07!25;CL:0000827!2.36e-07!25;CL:0000791!2.47e-07!18;CL:0000789!2.47e-07!18;CL:0002420!2.47e-07!18;CL:0002419!2.47e-07!18;CL:0000790!2.47e-07!18 | |ontology_enrichment_celltype=CL:0000738!6.08e-30!140;CL:0000037!2.86e-26!172;CL:0000566!2.86e-26!172;CL:0002087!1.27e-25!119;CL:0002031!1.21e-24!124;CL:0002057!2.07e-24!42;CL:0002032!1.05e-23!165;CL:0000837!1.05e-23!165;CL:0000988!5.94e-22!182;CL:0000860!7.67e-22!45;CL:0000557!2.28e-16!71;CL:0000766!2.70e-16!76;CL:0002009!8.52e-15!65;CL:0002194!8.32e-14!63;CL:0000576!8.32e-14!63;CL:0000040!8.32e-14!63;CL:0000559!8.32e-14!63;CL:0000839!1.01e-13!70;CL:0000763!2.94e-13!112;CL:0000049!2.94e-13!112;CL:0000542!1.79e-10!53;CL:0000051!1.79e-10!53;CL:0000838!4.02e-10!52;CL:0000134!3.35e-08!358;CL:0002320!6.11e-08!365;CL:0002393!1.16e-07!9;CL:0002397!1.16e-07!9;CL:0000084!2.36e-07!25;CL:0000827!2.36e-07!25;CL:0000791!2.47e-07!18;CL:0000789!2.47e-07!18;CL:0002420!2.47e-07!18;CL:0002419!2.47e-07!18;CL:0000790!2.47e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.25e-23;33!CL:0002057;5.25e-23;33!CL:0000576;2.77e-21;48!CL:0000473;7.03e-16;39!CL:0000234;7.03e-16;39!CL:0000766;1.16e-13;69!CL:0002087;3.30e-13;104!CL:0000791;4.21e-11;18!CL:0000789;4.21e-11;18!CL:0002419;4.21e-11;18!CL:0000624;8.70e-10;6!CL:0000738;3.60e-09;136!CL:0002393;5.35e-09;6!CL:0002397;5.35e-09;6!CL:0000084;5.62e-08;25!CL:0000763;1.84e-07;100!CL:0000542;2.24e-07;53!CL:0000988;3.64e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.70e-44,136;CL:0002087,2.49e-38,115;CL:0002031,1.13e-37,120;CL:0000037,2.05e-37,168;CL:0000860,5.64e-37,42;CL:0002057,5.64e-37,42;CL:0000988,4.29e-34,177;CL:0002032,9.82e-33,161;CL:0000837,9.82e-33,161;CL:0000473,1.25e-30,48;CL:0000234,1.25e-30,48;CL:0000557,1.14e-29,67;CL:0000766,3.74e-28,72;CL:0002009,1.15e-26,61;CL:0000839,1.73e-25,66;CL:0002194,8.37e-25,59;CL:0000576,8.37e-25,59;CL:0000040,8.37e-25,59;CL:0000559,8.37e-25,59;CL:0000763,1.75e-20,108;CL:0000049,1.75e-20,108;CL:0000134,5.69e-14,354;CL:0002320,3.75e-13,361;CL:0002393,1.03e-12,9;CL:0002397,1.03e-12,9;CL:0000542,2.28e-11,53;CL:0000051,2.28e-11,53;CL:0000791,3.17e-11,18;CL:0000789,3.17e-11,18;CL:0002420,3.17e-11,18;CL:0002419,3.17e-11,18;CL:0000790,3.17e-11,18;CL:0000838,8.09e-11,52;CL:0000219,9.91e-11,386;CL:0000624,8.75e-10,6;CL:0000034,9.79e-09,441;CL:0000048,1.64e-08,427;CL:0000723,4.92e-08,433;CL:0000084,5.83e-08,25;CL:0000827,5.83e-08,25 | |||
|ontology_enrichment_development_v019=CL:0002057;8.03e-26;42!CL:0000790;4.21e-11;18!CL:0000051;2.24e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.37e-14!102;UBERON:0003061!1.37e-14!102;UBERON:0002371!2.31e-14!80;UBERON:0001474!1.81e-13!86;UBERON:0002193!2.03e-11!112;UBERON:0004765!2.67e-10!101;UBERON:0001434!2.67e-10!101;UBERON:0002384!2.89e-08!375;UBERON:0002405!9.65e-08!115 | |ontology_enrichment_uberon=UBERON:0002390!1.37e-14!102;UBERON:0003061!1.37e-14!102;UBERON:0002371!2.31e-14!80;UBERON:0001474!1.81e-13!86;UBERON:0002193!2.03e-11!112;UBERON:0004765!2.67e-10!101;UBERON:0001434!2.67e-10!101;UBERON:0002384!2.89e-08!375;UBERON:0002405!9.65e-08!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.11e-28,98;UBERON:0003061,8.11e-28,98;UBERON:0002371,3.24e-27,76;UBERON:0001474,3.02e-25,82;UBERON:0002193,1.52e-23,108;UBERON:0004765,1.36e-21,90;UBERON:0002405,1.11e-20,93;UBERON:0001434,6.77e-18,100;UBERON:0002384,1.75e-12,371;UBERON:0003081,1.17e-08,203;UBERON:0002204,8.28e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.618831764800233,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,18.4881210118985,12.2825407391108,16.5653251948201,0,0,0,0,0.284338464974843,11.7440175733939,10.5259127621057,16.2441002450815,30.3815219002193,0,0,0,3.05336301437086,0.755751887377619,1.69808842831471,2.09186133215116,1.6446715520873,2.78735733805593,6.04154023876516,1.7931249457037,3.07426898855161,5.5159308917859,3.87290810150296,2.70852973188684,1.88242339542605,1.36453075028923,0.898893937780338,3.97909060082173,0.641858054152187,5.11469700639233,3.95821560224059,1.99463657621632,6.39337125799041,3.19230162491442,0.56738522469114,4.35975574296902,5.52747063564835,4.69334626578181,4.34377689410233,4.84319602106695,1.10483290796269,4.1140110367315,6.97142444829408,5.95292039902122,7.54771123830153,3.25753030324836,8.25972910628285,4.8217676009124,12.5405607246149,8.15558376516269,13.3344832248183,1.75996244461323,1.09227722252426,0.889509253863555,3.41384178053206,0.800791974072025,1.14950487990897,1.98313461835459,0,28.4606484554724,14.6809297342735,19.1136614062614,5.28685314316103,4.48406850385229,6.58460211937693,26.3591091952536,51.0913991573914,46.0547357758901,0,19.2294137313818,17.9910166179199,25.3274746930285,1.22551502573691,12.9626599288928,11.7412964129319,11.3737622781307,1.28091319725675,1.69077151827842,0.657751618414705,0.829050053357545,0.289803085735052,29.0641663797638,33.7101443393039,31.360657141493,1.24640276967323,27.9750960329403,34.7063719937456,24.7959298179113,1.27426165729639,0.651083453856419,0,4.81840381048873,0.76791966692651,0,1.65744076430812,1.64225599384209,24.7976294166421,42.2555509337942,41.8542527221289,4.87613732627923,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,1.43094374583205,2.28797964312051,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0.496971951695318,0,0.397227542439656,1.14734648299525,0,0,0,0,0,0,0,0.151357427644931,1.72852777344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,3.58779271377724,0,0,1.20036438433761,0.103052529238439,3.86460810068444,0,1.18143432568886,0,1.26216887122057,0.0920498986422993,0.161646056818812,3.19508633264953,0,0,0,0,0,0,0,0,0,0,0.72995471815166,0,0,0,2.3218396401599,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,11.1957182392017,24.6445120343004,16.1590314785766,0.063497894292169,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,20.0971375405966,35.1472947021013,35.9360501583295,0,1.30139853857622,0,0.502548796003046,0,0.749007023947182,0,0.828831026872071,0.613457458595699,0,0,1.45579603071565,1.96271887676878,0.630809660135739,0.468565659970853,0,0,0,0,0,0,0,0,3.3082884179662,15.3157082581218,2.56146138728266,0,0,0,0,0.61384789315225,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0.165284915360978,0,1.65896526242959,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0.286822704408103,0,0,0,0.211107635297664,0,0,0,0,0,1.08890984861323,0.282431402330337,0,0,0,0,0.507447609232169,1.52927441428475,1.13929437434833,0.714695326373367,2.05681136543097,1.29694662238543,0,1.58625035258854,0.106824071127473,0,1.47024129588619,1.30062222588003,0.432807638929335,0.640276590135727,0,0.399158742865633,0.957526850661834,0.211673582723883,0.973865820823666,0.280797178113459,0.228234679033192,0,2.50634477090067,0,0.321176150207399,0,0,0.687010689511529,0.921722292925374,0.894704431569664,10.0109485027145,0,0,0,0,0.33307196799782,1.4098700508785,0.748562161632879,0,0,0.111443384277478,0.568272293612826,0.71623345421307,0.593929361665277,1.53580351049616,0.994147647766298,0.703347082052564,0,0.494411622680279,0.211125408127993,0.996239941255349,0.828851746593443,0,0.102268682502155,0.492339221844278,0.311039587661807,0.269605053441981,0,2.55786185113436,0.0986434056369336,0,0,0,0.0927680981618513,0,1.30213880542617,0.61221999997337,0,0.1137934482855,1.5255219017566,1.41832609060762,0.344743373241465,0.291604613383254,0.173624994933292,0.885741385813839,0.241192877250816,0,0.552896299656123,0.295547618953547,0,0.435753854075961,0.278847488557207,0.230850775511391,0,0,0.448788222048861,0.434589487688032,0.957003479195758,0.0915975934018623,1.06606955203727,1.02193298195737,1.72678282034527,0,0,0,0,0,0.317873157960757,0.632994193584081,0.326465616318295,0,0.216388639742091,0,0,0,0,0,0,0.134802265961354,3.21031058919516,0,1.64209310294099,0,0.728341138602278,1.18375320854817,0,0,1.5796644907122,0.150323419414493,0,0,0.33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| ||
|short_description=p6@EFCAB2 | |short_description=p6@EFCAB2 | ||
}} | }} |
Latest revision as of 21:28, 16 September 2015
Short description: | p6@EFCAB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_EFCAB2_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | 0bp_to_ENST00000518607_5end |
EntrezGene: | EFCAB2 |
HGNC: | 28166 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.11e-28 | 98 |
blood island | 8.11e-28 | 98 |
bone marrow | 3.24e-27 | 76 |
bone element | 3.02e-25 | 82 |
hemolymphoid system | 1.52e-23 | 108 |
skeletal element | 1.36e-21 | 90 |
immune system | 1.11e-20 | 93 |
skeletal system | 6.77e-18 | 100 |
connective tissue | 1.75e-12 | 371 |
lateral plate mesoderm | 1.17e-08 | 203 |
musculoskeletal system | 8.28e-07 | 167 |