FFCP PHASE1:Hg19::chr1:150230160..150230176,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:150230160..150230176,+
|short_description=p4@CA14
|description=CAGE_peak_4_at_CA14_5end
|association_with_transcript=0bp_to_ENST00000369111_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23632 | |EntrezGene=23632 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1372 | |HGNC=1372 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULX7 | |UniProt=Q9ULX7 | ||
|association_with_transcript=0bp_to_ENST00000369111_5end | |||
|cluster_id=chr1:150230160..150230176,+ | |||
|coexpression_cluster_id=C1249 | |||
|description=CAGE_peak_4_at_CA14_5end | |||
|id=chr1:150230160..150230176,+ | |||
|ontology_enrichment_celltype=CL:0000147!4.36e-13!14;CL:0000148!7.21e-13!10;CL:0000541!7.21e-13!10;CL:0002322!2.05e-11!5;CL:0000710!8.13e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;9.72e-25;10!CL:0002322;4.07e-21;5!CL:0000147;2.79e-17;14!CL:0000710;1.10e-11;20!CL:0000075;2.10e-10;27!CL:0002321;1.70e-09;15!CL:0000540;5.69e-07;6!CL:0000404;5.69e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,8.22e-25,10;CL:0000541,8.22e-25,10;CL:0002322,4.17e-21,5;CL:0000147,2.49e-17,14;CL:0000710,1.02e-11,20;CL:0000075,2.01e-10,27;CL:0000047,1.97e-08,8;CL:0000133,2.26e-08,59;CL:0000540,5.70e-07,6;CL:0000031,5.70e-07,6;CL:0000404,5.70e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.05e-07;82!CL:0000031;5.69e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.48e-35!94;UBERON:0001016!5.48e-35!94;UBERON:0005743!2.04e-34!86;UBERON:0007023!2.73e-33!115;UBERON:0001017!3.13e-31!82;UBERON:0001049!5.97e-30!57;UBERON:0005068!5.97e-30!57;UBERON:0006241!5.97e-30!57;UBERON:0007135!5.97e-30!57;UBERON:0003075!1.82e-27!86;UBERON:0007284!1.82e-27!86;UBERON:0002346!1.07e-25!90;UBERON:0002616!8.90e-25!59;UBERON:0001893!2.59e-24!34;UBERON:0002020!6.08e-24!34;UBERON:0003528!6.08e-24!34;UBERON:0002780!4.97e-23!41;UBERON:0001890!4.97e-23!41;UBERON:0006240!4.97e-23!41;UBERON:0002791!6.95e-23!33;UBERON:0000955!2.49e-22!69;UBERON:0006238!2.49e-22!69;UBERON:0003080!2.59e-22!42;UBERON:0001869!2.64e-21!32;UBERON:0003056!3.11e-20!61;UBERON:0004121!1.30e-19!169;UBERON:0000924!8.21e-19!173;UBERON:0006601!8.21e-19!173;UBERON:0002619!7.03e-17!22;UBERON:0001950!1.64e-16!20;UBERON:0000956!2.01e-14!25;UBERON:0000203!2.01e-14!25;UBERON:0000033!1.64e-13!123;UBERON:0000153!3.06e-13!129;UBERON:0007811!3.06e-13!129;UBERON:0002308!7.73e-12!9;UBERON:0000125!7.73e-12!9;UBERON:0002298!2.51e-11!8;UBERON:0002021!1.66e-09!5;UBERON:0009663!5.40e-09!7;UBERON:0003076!9.76e-09!15;UBERON:0003057!9.76e-09!15;UBERON:0000200!1.84e-07!6;UBERON:0001896!5.92e-07!3;UBERON:0005290!5.92e-07!3;UBERON:0010096!5.92e-07!3;UBERON:0002420!8.14e-07!9;UBERON:0007245!8.14e-07!9;UBERON:0010009!8.14e-07!9;UBERON:0010011!8.14e-07!9;UBERON:0000454!8.14e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.12e-15;6!UBERON:0001896;3.28e-12;3!UBERON:0005290;3.28e-12;3!UBERON:0001893;4.66e-11;34!UBERON:0000073;6.82e-11;53!UBERON:0002616;6.82e-11;53!UBERON:0004732;5.00e-10;13!UBERON:0002780;1.30e-09;41!UBERON:0001890;1.30e-09;41!UBERON:0005162;5.84e-09;2!UBERON:0000122;5.84e-09;2!UBERON:0001869;7.27e-09;32!UBERON:0003528;2.73e-08;34!UBERON:0002020;2.73e-08;34!UBERON:0002791;3.27e-08;32!UBERON:0001950;9.84e-08;20!UBERON:0004733;1.05e-07;12!UBERON:0002028;1.05e-07;12!UBERON:0002021;3.29e-07;5!UBERON:0002619;5.54e-07;22!UBERON:0001017;7.20e-07;75!UBERON:0000125;9.71e-07;9!UBERON:0002308;9.71e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.10e-19,89;UBERON:0001049,5.93e-19,56;UBERON:0005068,5.93e-19,56;UBERON:0006241,5.93e-19,56;UBERON:0007135,5.93e-19,56;UBERON:0001017,1.81e-18,81;UBERON:0000073,5.78e-18,53;UBERON:0002616,5.78e-18,53;UBERON:0003075,1.82e-16,82;UBERON:0007284,1.82e-16,82;UBERON:0002298,1.56e-15,6;UBERON:0002346,1.80e-15,86;UBERON:0010371,3.10e-13,104;UBERON:0000955,6.57e-13,68;UBERON:0006238,6.57e-13,68;UBERON:0001893,1.12e-12,34;UBERON:0001896,2.87e-12,3;UBERON:0005290,2.87e-12,3;UBERON:0010096,2.87e-12,3;UBERON:0002780,4.36e-12,41;UBERON:0001890,4.36e-12,41;UBERON:0003080,4.36e-12,41;UBERON:0006240,4.36e-12,41;UBERON:0007023,7.20e-12,114;UBERON:0003056,9.51e-12,61;UBERON:0003528,1.77e-10,34;UBERON:0002020,1.77e-10,34;UBERON:0004121,2.14e-10,171;UBERON:0000924,2.14e-10,171;UBERON:0006601,2.14e-10,171;UBERON:0004732,5.63e-10,13;UBERON:0010314,2.19e-09,132;UBERON:0002791,2.84e-09,32;UBERON:0001869,3.05e-09,32;UBERON:0005162,4.99e-09,2;UBERON:0000122,4.99e-09,2;UBERON:0003076,1.68e-08,15;UBERON:0003057,1.68e-08,15;UBERON:0001950,8.74e-08,20;UBERON:0004733,1.23e-07,12;UBERON:0002028,1.23e-07,12;UBERON:0007277,1.23e-07,12;UBERON:0002021,3.34e-07,5;UBERON:0002619,4.98e-07,22 | |||
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| ||
|short_description=p4@CA14 | |||
}} | }} |
Latest revision as of 21:45, 16 September 2015
Short description: | p4@CA14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CA14_5end |
Coexpression cluster: | C1249_Melanocyte_anaplastic_Wilms_retina_heart_optic_teratocarcinoma |
Association with transcript: | 0bp_to_ENST00000369111_5end |
EntrezGene: | CA14 |
HGNC: | 1372 |
UniProt: | Q9ULX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 8.22e-25 | 10 |
melanoblast | 8.22e-25 | 10 |
embryonic stem cell | 4.17e-21 | 5 |
pigment cell | 2.49e-17 | 14 |
neurecto-epithelial cell | 1.02e-11 | 20 |
columnar/cuboidal epithelial cell | 2.01e-10 | 27 |
neuronal stem cell | 1.97e-08 | 8 |
neurectodermal cell | 2.26e-08 | 59 |
neuron | 5.70e-07 | 6 |
neuroblast | 5.70e-07 | 6 |
electrically signaling cell | 5.70e-07 | 6 |