FFCP PHASE1:Hg19::chr4:176734149..176734174,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:176734149..176734174,- to FFCP PHASE1:Hg19::chr4:176734149..176734174,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2823 | |EntrezGene=2823 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4460 | |HGNC=4460 | ||
|TSSclassifier=strong | |||
|UniProt=P51674,Q86YB0 | |UniProt=P51674,Q86YB0 | ||
|association_with_transcript=7bp_to_NM_201591,uc003iuf.2_5end | |||
|cluster_id=chr4:176734149..176734174,- | |||
|coexpression_cluster_id=C4396 | |||
|description=CAGE_peak_12_at_GPM6A_5end | |||
|id=chr4:176734149..176734174,- | |||
|ontology_enrichment_celltype=CL:0000047!4.00e-10!8;CL:0002319!2.08e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000540;9.11e-08;6!CL:0000404;9.11e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.31e-10,8;CL:0000540,8.89e-08,6;CL:0000031,8.89e-08,6;CL:0000404,8.89e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.38e-15;82!UBERON:0010122;9.88e-11;2!UBERON:0006238;8.08e-08;10!CL:0000031;9.11e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.93e-99!82;UBERON:0005743!1.55e-97!86;UBERON:0001049!4.82e-89!57;UBERON:0005068!4.82e-89!57;UBERON:0006241!4.82e-89!57;UBERON:0007135!4.82e-89!57;UBERON:0001893!2.94e-88!34;UBERON:0001869!3.45e-88!32;UBERON:0002020!6.69e-88!34;UBERON:0003528!6.69e-88!34;UBERON:0000073!2.12e-87!94;UBERON:0001016!2.12e-87!94;UBERON:0002791!6.44e-85!33;UBERON:0000955!1.61e-83!69;UBERON:0006238!1.61e-83!69;UBERON:0002780!8.41e-82!41;UBERON:0001890!8.41e-82!41;UBERON:0006240!8.41e-82!41;UBERON:0002616!2.00e-81!59;UBERON:0003080!1.08e-79!42;UBERON:0002619!1.09e-69!22;UBERON:0003075!2.56e-68!86;UBERON:0007284!2.56e-68!86;UBERON:0000956!2.35e-66!25;UBERON:0000203!2.35e-66!25;UBERON:0002346!7.75e-65!90;UBERON:0001950!2.63e-63!20;UBERON:0003056!7.78e-56!61;UBERON:0000033!2.01e-47!123;UBERON:0004121!4.14e-46!169;UBERON:0000924!8.62e-45!173;UBERON:0006601!8.62e-45!173;UBERON:0000153!9.61e-45!129;UBERON:0007811!9.61e-45!129;UBERON:0007023!1.59e-44!115;UBERON:0002420!3.90e-23!9;UBERON:0007245!3.90e-23!9;UBERON:0010009!3.90e-23!9;UBERON:0010011!3.90e-23!9;UBERON:0000454!3.90e-23!9;UBERON:0000025!4.17e-23!194;UBERON:0002308!2.54e-22!9;UBERON:0000125!2.54e-22!9;UBERON:0000200!1.21e-21!6;UBERON:0001871!2.52e-21!7;UBERON:0001872!6.32e-18!5;UBERON:0000349!1.17e-17!5;UBERON:0002021!3.26e-17!5;UBERON:0009663!9.51e-17!7;UBERON:0004111!1.43e-16!241;UBERON:0000064!5.98e-16!219;UBERON:0000369!4.27e-14!4;UBERON:0002435!4.27e-14!4;UBERON:0000204!4.27e-14!4;UBERON:0010082!4.27e-14!4;UBERON:0000477!2.79e-13!286;UBERON:0000483!4.45e-13!309;UBERON:0000119!7.54e-13!312;UBERON:0003076!3.30e-12!15;UBERON:0003057!3.30e-12!15;UBERON:0002680!3.91e-12!9;UBERON:0001895!3.91e-12!9;UBERON:0010092!3.91e-12!9;UBERON:0004733!5.69e-12!12;UBERON:0002028!5.69e-12!12;UBERON:0007277!5.69e-12!12;UBERON:0002771!8.48e-12!3;UBERON:0000475!4.31e-11!365;UBERON:0004732!5.61e-11!13;UBERON:0005383!5.89e-11!3;UBERON:0005382!5.89e-11!3;UBERON:0000988!4.15e-10!3;UBERON:0001870!1.82e-08!2;UBERON:0001876!2.78e-08!2;UBERON:0001954!6.20e-08!2;UBERON:0003022!6.20e-08!2;UBERON:0002421!6.20e-08!2;UBERON:0002600!6.20e-08!2;UBERON:0001873!9.99e-08!2;UBERON:0010122!9.99e-08!2;UBERON:0002360!1.71e-07!2;UBERON:0000094!1.71e-07!2;UBERON:0007645!1.71e-07!2;UBERON:0002148!2.46e-07!2;UBERON:0009662!2.46e-07!2;UBERON:0001875!2.89e-07!2;UBERON:0006514!2.89e-07!2;UBERON:0000481!3.79e-07!347;UBERON:0000062!8.10e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.81e-103;22!UBERON:0001869;5.40e-95;32!UBERON:0001950;2.19e-93;20!UBERON:0000956;2.14e-90;25!UBERON:0000203;2.14e-90;25!UBERON:0002791;1.31e-88;32!UBERON:0001893;3.40e-87;34!UBERON:0003528;9.77e-82;34!UBERON:0002020;9.77e-82;34!UBERON:0002780;1.23e-62;41!UBERON:0001890;1.23e-62;41!UBERON:0000073;2.39e-37;53!UBERON:0002616;2.39e-37;53!UBERON:0000200;2.76e-31;6!UBERON:0000955;6.48e-31;68!UBERON:0001017;3.82e-29;75!UBERON:0001871;4.12e-26;6!UBERON:0001872;8.31e-26;5!UBERON:0000349;3.04e-25;5!UBERON:0002021;9.45e-25;5!UBERON:0001016;4.82e-22;83!UBERON:0000369;4.13e-20;4!UBERON:0002435;4.13e-20;4!UBERON:0000204;4.13e-20;4!UBERON:0002420;1.11e-19;9!UBERON:0007245;1.11e-19;9!UBERON:0010009;1.11e-19;9!UBERON:0010011;1.11e-19;9!UBERON:0000454;1.11e-19;9!UBERON:0001870;1.12e-16;3!UBERON:0005383;1.73e-15;3!UBERON:0005382;1.73e-15;3!UBERON:0002702;9.57e-12;2!UBERON:0002771;1.01e-11;2!UBERON:0009663;1.45e-11;7!UBERON:0001876;1.94e-11;2!UBERON:0001954;6.13e-11;2!UBERON:0003022;6.13e-11;2!UBERON:0002421;6.13e-11;2!UBERON:0002600;6.13e-11;2!UBERON:0001873;9.88e-11;2!UBERON:0007023;6.40e-10;114!UBERON:0011216;2.19e-09;132!UBERON:0000125;5.11e-09;9!UBERON:0002308;5.11e-09;9!UBERON:0010314;9.03e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,8.75e-107,32;UBERON:0002619,6.75e-103,22;UBERON:0001893,2.38e-100,34;UBERON:0002791,1.09e-98,32;UBERON:0001950,2.09e-93,20;UBERON:0003528,1.00e-92,34;UBERON:0002020,1.00e-92,34;UBERON:0000956,1.88e-90,25;UBERON:0000203,1.88e-90,25;UBERON:0002780,7.08e-89,41;UBERON:0001890,7.08e-89,41;UBERON:0003080,7.08e-89,41;UBERON:0006240,7.08e-89,41;UBERON:0001017,1.03e-76,81;UBERON:0001016,1.56e-68,89;UBERON:0000955,3.35e-68,68;UBERON:0006238,3.35e-68,68;UBERON:0000073,8.68e-68,53;UBERON:0002616,8.68e-68,53;UBERON:0001049,6.67e-64,56;UBERON:0005068,6.67e-64,56;UBERON:0006241,6.67e-64,56;UBERON:0007135,6.67e-64,56;UBERON:0003056,2.92e-58,61;UBERON:0003075,5.56e-42,82;UBERON:0007284,5.56e-42,82;UBERON:0002346,9.03e-40,86;UBERON:0004121,6.08e-33,171;UBERON:0000924,6.08e-33,171;UBERON:0006601,6.08e-33,171;UBERON:0010371,6.62e-32,104;UBERON:0000200,2.83e-31,6;UBERON:0007023,5.28e-29,114;UBERON:0011216,1.20e-28,223;UBERON:0001871,3.54e-26,6;UBERON:0010314,5.31e-26,132;UBERON:0001872,9.21e-26,5;UBERON:0000349,2.30e-25,5;UBERON:0002021,1.04e-24,5;UBERON:0000369,4.34e-20,4;UBERON:0002435,4.34e-20,4;UBERON:0000204,4.34e-20,4;UBERON:0010082,4.34e-20,4;UBERON:0002420,1.05e-19,9;UBERON:0007245,1.05e-19,9;UBERON:0010009,1.05e-19,9;UBERON:0010011,1.05e-19,9;UBERON:0000454,1.05e-19,9;UBERON:0001870,1.04e-16,3;UBERON:0000025,7.22e-16,192;UBERON:0005383,1.91e-15,3;UBERON:0005382,1.91e-15,3;UBERON:0002771,9.57e-12,2;UBERON:0002702,9.57e-12,2;UBERON:0009663,1.50e-11,7;UBERON:0001876,1.70e-11,2;UBERON:0004111,1.83e-11,240;UBERON:0001954,5.54e-11,2;UBERON:0003022,5.54e-11,2;UBERON:0002421,5.54e-11,2;UBERON:0002600,5.54e-11,2;UBERON:0001873,1.12e-10,2;UBERON:0010122,1.12e-10,2;UBERON:0000125,5.22e-09,9;UBERON:0002308,5.22e-09,9;UBERON:0000483,1.13e-07,306;UBERON:0000119,1.53e-07,309;UBERON:0000923,4.89e-07,560;UBERON:0010316,4.89e-07,560;UBERON:0005291,4.89e-07,560;UBERON:0006598,4.89e-07,560;UBERON:0010317,4.89e-07,560;UBERON:0002532,4.89e-07,560;UBERON:0002050,6.22e-07,564;UBERON:0003112,9.81e-07,1;UBERON:0011158,9.81e-07,1;UBERON:0003128,9.81e-07,1;UBERON:0001703,9.81e-07,1;UBERON:0002241,9.81e-07,1;UBERON:0004761,9.81e-07,1;UBERON:0009617,9.81e-07,1 | |||
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|short_description=p12@GPM6A | |||
}} | }} |
Latest revision as of 21:58, 16 September 2015
Short description: | p12@GPM6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_GPM6A_5end |
Coexpression cluster: | C4396_glioblastoma_medial_amygdala_insula_olfactory_brain_parietal |
Association with transcript: | 7bp_to_NM_201591, uc003iuf.2_5end |
EntrezGene: | GPM6A |
HGNC: | 4460 |
UniProt: | P51674Q86YB0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.31e-10 | 8 |
neuron | 8.89e-08 | 6 |
neuroblast | 8.89e-08 | 6 |
electrically signaling cell | 8.89e-08 | 6 |