FFCP PHASE1:Hg19::chr20:49411484..49411518,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55653 | |EntrezGene=55653 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14367 | |HGNC=14367 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000371608_5end | |association_with_transcript=-12bp_to_ENST00000371608_5end | ||
|cluster_id=chr20:49411484..49411518,+ | |||
|coexpression_cluster_id=C3659 | |coexpression_cluster_id=C3659 | ||
|description=CAGE_peak_2_at_BCAS4_5end | |description=CAGE_peak_2_at_BCAS4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.08e-09;82 | |ontology_enrichment_development_v019=UBERON:0006601;2.08e-09;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.71e-26!86;UBERON:0000073!5.20e-26!94;UBERON:0001016!5.20e-26!94;UBERON:0001049!1.47e-25!57;UBERON:0005068!1.47e-25!57;UBERON:0006241!1.47e-25!57;UBERON:0007135!1.47e-25!57;UBERON:0000955!1.58e-25!69;UBERON:0006238!1.58e-25!69;UBERON:0002346!2.41e-25!90;UBERON:0001017!3.45e-25!82;UBERON:0003075!7.50e-24!86;UBERON:0007284!7.50e-24!86;UBERON:0002616!8.98e-23!59;UBERON:0003056!3.51e-22!61;UBERON:0003080!8.40e-22!42;UBERON:0002780!1.57e-21!41;UBERON:0001890!1.57e-21!41;UBERON:0006240!1.57e-21!41;UBERON:0001869!7.15e-21!32;UBERON:0002020!8.55e-20!34;UBERON:0003528!8.55e-20!34;UBERON:0001893!1.73e-19!34;UBERON:0000033!2.52e-19!123;UBERON:0000153!2.76e-19!129;UBERON:0007811!2.76e-19!129;UBERON:0002791!8.12e-19!33;UBERON:0000924!4.02e-17!173;UBERON:0006601!4.02e-17!173;UBERON:0000956!2.64e-16!25;UBERON:0000203!2.64e-16!25;UBERON:0002619!3.06e-16!22;UBERON:0004121!6.50e-16!169;UBERON:0001950!6.53e-15!20;UBERON:0007023!7.12e-11!115;UBERON:0000475!3.04e-07!365;UBERON:0000064!3.53e-07!219 | |ontology_enrichment_uberon=UBERON:0005743!1.71e-26!86;UBERON:0000073!5.20e-26!94;UBERON:0001016!5.20e-26!94;UBERON:0001049!1.47e-25!57;UBERON:0005068!1.47e-25!57;UBERON:0006241!1.47e-25!57;UBERON:0007135!1.47e-25!57;UBERON:0000955!1.58e-25!69;UBERON:0006238!1.58e-25!69;UBERON:0002346!2.41e-25!90;UBERON:0001017!3.45e-25!82;UBERON:0003075!7.50e-24!86;UBERON:0007284!7.50e-24!86;UBERON:0002616!8.98e-23!59;UBERON:0003056!3.51e-22!61;UBERON:0003080!8.40e-22!42;UBERON:0002780!1.57e-21!41;UBERON:0001890!1.57e-21!41;UBERON:0006240!1.57e-21!41;UBERON:0001869!7.15e-21!32;UBERON:0002020!8.55e-20!34;UBERON:0003528!8.55e-20!34;UBERON:0001893!1.73e-19!34;UBERON:0000033!2.52e-19!123;UBERON:0000153!2.76e-19!129;UBERON:0007811!2.76e-19!129;UBERON:0002791!8.12e-19!33;UBERON:0000924!4.02e-17!173;UBERON:0006601!4.02e-17!173;UBERON:0000956!2.64e-16!25;UBERON:0000203!2.64e-16!25;UBERON:0002619!3.06e-16!22;UBERON:0004121!6.50e-16!169;UBERON:0001950!6.53e-15!20;UBERON:0007023!7.12e-11!115;UBERON:0000475!3.04e-07!365;UBERON:0000064!3.53e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.70e-45;32!UBERON:0002791;1.99e-42;32!UBERON:0003528;1.50e-40;34!UBERON:0002020;1.50e-40;34!UBERON:0001893;1.54e-40;34!UBERON:0002619;1.58e-40;22!UBERON:0000956;5.32e-38;25!UBERON:0000203;5.32e-38;25!UBERON:0001950;6.32e-37;20!UBERON:0002780;2.85e-31;41!UBERON:0001890;2.85e-31;41!UBERON:0000073;7.88e-25;53!UBERON:0002616;7.88e-25;53!UBERON:0000955;1.19e-19;68!UBERON:0001017;5.37e-16;75!UBERON:0001016;1.62e-13;83!UBERON:0002420;4.38e-13;9!UBERON:0007245;4.38e-13;9!UBERON:0010009;4.38e-13;9!UBERON:0010011;4.38e-13;9!UBERON:0000454;4.38e-13;9!UBERON:0001871;1.05e-12;6!UBERON:0000200;2.28e-12;6!UBERON:0002021;2.04e-10;5!UBERON:0000349;3.11e-10;5!UBERON:0009663;6.37e-10;7!UBERON:0001872;7.84e-10;5!UBERON:0000125;7.92e-10;9!UBERON:0002308;7.92e-10;9!UBERON:0000369;3.28e-09;4!UBERON:0002435;3.28e-09;4!UBERON:0000204;3.28e-09;4!UBERON:0005383;2.24e-07;3!UBERON:0005382;2.24e-07;3!UBERON:0001870;5.00e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001869;2.70e-45;32!UBERON:0002791;1.99e-42;32!UBERON:0003528;1.50e-40;34!UBERON:0002020;1.50e-40;34!UBERON:0001893;1.54e-40;34!UBERON:0002619;1.58e-40;22!UBERON:0000956;5.32e-38;25!UBERON:0000203;5.32e-38;25!UBERON:0001950;6.32e-37;20!UBERON:0002780;2.85e-31;41!UBERON:0001890;2.85e-31;41!UBERON:0000073;7.88e-25;53!UBERON:0002616;7.88e-25;53!UBERON:0000955;1.19e-19;68!UBERON:0001017;5.37e-16;75!UBERON:0001016;1.62e-13;83!UBERON:0002420;4.38e-13;9!UBERON:0007245;4.38e-13;9!UBERON:0010009;4.38e-13;9!UBERON:0010011;4.38e-13;9!UBERON:0000454;4.38e-13;9!UBERON:0001871;1.05e-12;6!UBERON:0000200;2.28e-12;6!UBERON:0002021;2.04e-10;5!UBERON:0000349;3.11e-10;5!UBERON:0009663;6.37e-10;7!UBERON:0001872;7.84e-10;5!UBERON:0000125;7.92e-10;9!UBERON:0002308;7.92e-10;9!UBERON:0000369;3.28e-09;4!UBERON:0002435;3.28e-09;4!UBERON:0000204;3.28e-09;4!UBERON:0005383;2.24e-07;3!UBERON:0005382;2.24e-07;3!UBERON:0001870;5.00e-07;3 | ||
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| ||
|short_description=p2@BCAS4 | |short_description=p2@BCAS4 | ||
}} | }} |
Latest revision as of 22:29, 16 September 2015
Short description: | p2@BCAS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BCAS4_5end |
Coexpression cluster: | C3659_breast_MCF7_cerebellum_occipital_pons_frontal_paracentral |
Association with transcript: | -12bp_to_ENST00000371608_5end |
EntrezGene: | BCAS4 |
HGNC: | 14367 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data