FFCP PHASE1:Hg19::chr19:2308162..2308176,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr19:2308162..2308176,- to FFCP PHASE1:Hg19::chr19:2308162..2308176,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=645191 | |EntrezGene=645191 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21206 | |HGNC=21206 | ||
|TSSclassifier=strong | |||
|UniProt=P0C6S8 | |UniProt=P0C6S8 | ||
|association_with_transcript=-6bp_to_ENST00000404279,NM_001101391,uc010dsx.1_5end | |||
|cluster_id=chr19:2308162..2308176,- | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_3_at_LINGO3_5end | |||
|id=chr19:2308162..2308176,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.74e-50;2!UBERON:0006215;1.07e-33;3!UBERON:0006222;6.72e-26;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.49e-75!57;UBERON:0005068!2.49e-75!57;UBERON:0006241!2.49e-75!57;UBERON:0007135!2.49e-75!57;UBERON:0001017!6.68e-66!82;UBERON:0005743!8.70e-66!86;UBERON:0002616!5.97e-64!59;UBERON:0000955!1.09e-63!69;UBERON:0006238!1.09e-63!69;UBERON:0003075!1.20e-59!86;UBERON:0007284!1.20e-59!86;UBERON:0000073!8.20e-59!94;UBERON:0001016!8.20e-59!94;UBERON:0002780!1.33e-57!41;UBERON:0001890!1.33e-57!41;UBERON:0006240!1.33e-57!41;UBERON:0002346!1.27e-56!90;UBERON:0003080!4.18e-56!42;UBERON:0002020!1.59e-49!34;UBERON:0003528!1.59e-49!34;UBERON:0001893!3.12e-49!34;UBERON:0007023!5.35e-48!115;UBERON:0001869!8.58e-48!32;UBERON:0002791!2.11e-46!33;UBERON:0003056!5.43e-43!61;UBERON:0000033!1.21e-36!123;UBERON:0000153!1.50e-34!129;UBERON:0007811!1.50e-34!129;UBERON:0002619!4.46e-30!22;UBERON:0004121!4.62e-29!169;UBERON:0001950!1.63e-28!20;UBERON:0000924!3.46e-28!173;UBERON:0006601!3.46e-28!173;UBERON:0002308!4.24e-28!9;UBERON:0000125!4.24e-28!9;UBERON:0000956!3.20e-26!25;UBERON:0000203!3.20e-26!25;UBERON:0002420!6.51e-22!9;UBERON:0007245!6.51e-22!9;UBERON:0010009!6.51e-22!9;UBERON:0010011!6.51e-22!9;UBERON:0000454!6.51e-22!9;UBERON:0009663!3.38e-21!7;UBERON:0000025!3.03e-20!194;UBERON:0003076!2.23e-19!15;UBERON:0003057!2.23e-19!15;UBERON:0000369!2.30e-17!4;UBERON:0002435!2.30e-17!4;UBERON:0000204!2.30e-17!4;UBERON:0010082!2.30e-17!4;UBERON:0004733!5.80e-15!12;UBERON:0002028!5.80e-15!12;UBERON:0007277!5.80e-15!12;UBERON:0004111!1.37e-14!241;UBERON:0004732!9.81e-14!13;UBERON:0000483!1.12e-13!309;UBERON:0005383!1.66e-13!3;UBERON:0005382!1.66e-13!3;UBERON:0000119!1.88e-13!312;UBERON:0001872!8.53e-13!5;UBERON:0000988!4.24e-12!3;UBERON:0000477!8.20e-12!286;UBERON:0002298!1.47e-11!8;UBERON:0000064!2.64e-11!219;UBERON:0002680!7.06e-11!9;UBERON:0001895!7.06e-11!9;UBERON:0010092!7.06e-11!9;UBERON:0000200!2.52e-10!6;UBERON:0001894!1.38e-09!7;UBERON:0006222!1.38e-09!7;UBERON:0001873!1.53e-09!2;UBERON:0010122!1.53e-09!2;UBERON:0000475!2.10e-09!365;UBERON:0001875!3.17e-09!2;UBERON:0006514!3.17e-09!2;UBERON:0001905!4.53e-09!2;UBERON:0002757!4.53e-09!2;UBERON:0010134!4.53e-09!2;UBERON:0002784!4.53e-09!2;UBERON:0005408!4.53e-09!2;UBERON:0001899!4.53e-09!2;UBERON:0002148!1.12e-08!2;UBERON:0009662!1.12e-08!2;UBERON:0002360!3.13e-08!2;UBERON:0000094!3.13e-08!2;UBERON:0007645!3.13e-08!2;UBERON:0001871!3.57e-08!7;UBERON:0000062!6.62e-08!511;UBERON:0000349!7.27e-08!5;UBERON:0002021!1.26e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;8.29e-99;4!UBERON:0002435;8.29e-99;4!UBERON:0000204;8.29e-99;4!UBERON:0005383;8.85e-75;3!UBERON:0005382;8.85e-75;3!UBERON:0009663;7.92e-57;7!UBERON:0001873;2.74e-50;2!UBERON:0002420;2.27e-44;9!UBERON:0000125;2.27e-44;9!UBERON:0007245;2.27e-44;9!UBERON:0002308;2.27e-44;9!UBERON:0010009;2.27e-44;9!UBERON:0010011;2.27e-44;9!UBERON:0000454;2.27e-44;9!UBERON:0001874;2.15e-26;1!UBERON:0001882;6.72e-26;1!UBERON:0005403;6.72e-26;1!UBERON:0000073;1.77e-19;53!UBERON:0002616;1.77e-19;53!UBERON:0000955;6.07e-18;68!UBERON:0002037;2.01e-17;6!UBERON:0002780;1.69e-16;41!UBERON:0001890;1.69e-16;41!UBERON:0001894;4.37e-15;7!UBERON:0001905;1.14e-13;2!UBERON:0002757;1.14e-13;2!UBERON:0010134;1.14e-13;2!UBERON:0005408;1.14e-13;2!UBERON:0001899;1.14e-13;2!UBERON:0002791;3.66e-13;32!UBERON:0001017;9.15e-13;75!UBERON:0003528;4.81e-12;34!UBERON:0002020;4.81e-12;34!UBERON:0001869;4.82e-12;32!UBERON:0002680;5.83e-12;9!UBERON:0001895;5.83e-12;9!UBERON:0001893;1.73e-11;34!UBERON:0001016;1.77e-09;83!UBERON:0007023;2.74e-09;114!UBERON:0004733;3.27e-09;12!UBERON:0002028;3.27e-09;12!UBERON:0004732;1.42e-08;13!UBERON:0003296;1.75e-07;4!UBERON:0010133;1.75e-07;4!UBERON:0002784;1.75e-07;4!UBERON:0010314;5.59e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,8.31e-99,4;UBERON:0002435,8.31e-99,4;UBERON:0000204,8.31e-99,4;UBERON:0010082,8.31e-99,4;UBERON:0005383,7.81e-75,3;UBERON:0005382,7.81e-75,3;UBERON:0009663,7.94e-57,7;UBERON:0001873,2.42e-50,2;UBERON:0010122,2.42e-50,2;UBERON:0002420,2.27e-44,9;UBERON:0000125,2.27e-44,9;UBERON:0007245,2.27e-44,9;UBERON:0002308,2.27e-44,9;UBERON:0010009,2.27e-44,9;UBERON:0010011,2.27e-44,9;UBERON:0000454,2.27e-44,9;UBERON:0000073,3.04e-29,53;UBERON:0002616,3.04e-29,53;UBERON:0001049,1.03e-27,56;UBERON:0005068,1.03e-27,56;UBERON:0006241,1.03e-27,56;UBERON:0007135,1.03e-27,56;UBERON:0001874,2.16e-26,1;UBERON:0001882,7.62e-26,1;UBERON:0005403,7.62e-26,1;UBERON:0000955,1.35e-22,68;UBERON:0006238,1.35e-22,68;UBERON:0002780,2.45e-21,41;UBERON:0001890,2.45e-21,41;UBERON:0003080,2.45e-21,41;UBERON:0006240,2.45e-21,41;UBERON:0001017,4.48e-19,81;UBERON:0003075,4.48e-19,82;UBERON:0007284,4.48e-19,82;UBERON:0002346,3.34e-18,86;UBERON:0002037,2.01e-17,6;UBERON:0006215,2.01e-17,6;UBERON:0001016,3.23e-17,89;UBERON:0010371,4.31e-15,104;UBERON:0001894,4.37e-15,7;UBERON:0006222,4.37e-15,7;UBERON:0003056,1.62e-14,61;UBERON:0007023,6.68e-14,114;UBERON:0001905,1.55e-13,2;UBERON:0002757,1.55e-13,2;UBERON:0010134,1.55e-13,2;UBERON:0005408,1.55e-13,2;UBERON:0001899,1.55e-13,2;UBERON:0002791,1.62e-12,32;UBERON:0001869,1.62e-12,32;UBERON:0002680,5.83e-12,9;UBERON:0001895,5.83e-12,9;UBERON:0010092,5.83e-12,9;UBERON:0010314,6.49e-12,132;UBERON:0003528,7.91e-12,34;UBERON:0002020,7.91e-12,34;UBERON:0001893,7.91e-12,34;UBERON:0004733,3.27e-09,12;UBERON:0002028,3.27e-09,12;UBERON:0007277,3.27e-09,12;UBERON:0004121,4.33e-09,171;UBERON:0000924,4.33e-09,171;UBERON:0006601,4.33e-09,171;UBERON:0004732,1.42e-08,13;UBERON:0000025,3.49e-08,192;UBERON:0003076,1.49e-07,15;UBERON:0003057,1.49e-07,15;UBERON:0003296,2.04e-07,4;UBERON:0010133,2.04e-07,4;UBERON:0002784,2.04e-07,4;UBERON:0011216,6.23e-07,223 | |||
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|short_description=p3@LINGO3 | |||
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Latest revision as of 23:59, 16 September 2015
Short description: | p3@LINGO3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LINGO3_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -6bp_to_ENST00000404279, NM_001101391, uc010dsx.1_5end |
EntrezGene: | LINGO3 |
HGNC: | 21206 |
UniProt: | P0C6S8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data