FFCP PHASE1:Hg19::chr11:17555421..17555441,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10083 | |EntrezGene=10083 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12597 | |HGNC=12597 | ||
|TSSclassifier=strong | |||
|UniProt=E9PNW1 | |UniProt=E9PNW1 | ||
|association_with_transcript=0bp_to_ENST00000526181_5end | |association_with_transcript=0bp_to_ENST00000526181_5end | ||
|cluster_id=chr11:17555421..17555441,- | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_6_at_USH1C_5end | |description=CAGE_peak_6_at_USH1C_5end | ||
|id=chr11:17555421..17555441,- | |id=chr11:17555421..17555441,- | ||
|ontology_enrichment_celltype=CL:0002150!1.05e-21!3;CL:0000861!1.05e-21!3;CL:0000313!9.94e-08!1;CL:0000235!7.61e-07!10 | |ontology_enrichment_celltype=CL:0002150!1.05e-21!3;CL:0000861!1.05e-21!3;CL:0000313!9.94e-08!1;CL:0000235!7.61e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000082;1.79e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,1.70e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.02e-18;1!UBERON:0010115;1.33e-17;1!UBERON:0005425;1.33e-17;1!UBERON:0001041;3.40e-09;30!UBERON:0003056;9.91e-07;3 | |||
|ontology_enrichment_disease=DOID:305!3.91e-13!106;DOID:0050687!6.40e-09!143;DOID:2152!9.94e-08!1 | |ontology_enrichment_disease=DOID:305!3.91e-13!106;DOID:0050687!6.40e-09!143;DOID:2152!9.94e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:1324;1.40e-10;15!DOID:0050615;5.90e-10;16!DOID:4556;5.80e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,1.31e-10,15;DOID:0050615,5.55e-10,16;DOID:305,2.69e-07,106;DOID:4556,5.80e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.95e-18!9;UBERON:0002360!2.06e-14!2;UBERON:0000094!2.06e-14!2;UBERON:0007645!2.06e-14!2;UBERON:0008947!4.85e-13!38;UBERON:0003258!4.85e-13!38;UBERON:0000072!1.60e-10!46;UBERON:0001896!9.81e-10!3;UBERON:0005290!9.81e-10!3;UBERON:0010096!9.81e-10!3;UBERON:0000063!3.33e-09!97;UBERON:0000065!6.04e-09!53;UBERON:0001557!1.23e-08!19;UBERON:0004732!2.69e-08!13;UBERON:0002363!3.11e-08!1;UBERON:0007647!3.11e-08!1;UBERON:0010115!3.11e-08!1;UBERON:0000941!3.58e-08!1;UBERON:0004904!3.58e-08!1;UBERON:0002464!3.58e-08!1;UBERON:0001021!3.58e-08!1;UBERON:0001785!3.58e-08!1;UBERON:0004911!9.94e-08!1 | |ontology_enrichment_uberon=UBERON:0001737!1.95e-18!9;UBERON:0002360!2.06e-14!2;UBERON:0000094!2.06e-14!2;UBERON:0007645!2.06e-14!2;UBERON:0008947!4.85e-13!38;UBERON:0003258!4.85e-13!38;UBERON:0000072!1.60e-10!46;UBERON:0001896!9.81e-10!3;UBERON:0005290!9.81e-10!3;UBERON:0010096!9.81e-10!3;UBERON:0000063!3.33e-09!97;UBERON:0000065!6.04e-09!53;UBERON:0001557!1.23e-08!19;UBERON:0004732!2.69e-08!13;UBERON:0002363!3.11e-08!1;UBERON:0007647!3.11e-08!1;UBERON:0010115!3.11e-08!1;UBERON:0000941!3.58e-08!1;UBERON:0004904!3.58e-08!1;UBERON:0002464!3.58e-08!1;UBERON:0001021!3.58e-08!1;UBERON:0001785!3.58e-08!1;UBERON:0004911!9.94e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002363;1.33e-17;1!UBERON:0000941;1.33e-17;1!UBERON:0001785;1.33e-17;1!UBERON:0002464;1.33e-17;1!UBERON:0004904;1.33e-17;1!UBERON:0001021;1.33e-17;1!UBERON:0002360;1.78e-09;2!UBERON:0003714;1.78e-09;2!UBERON:0005162;1.78e-09;2!UBERON:0000122;1.78e-09;2!UBERON:0000094;1.78e-09;2!UBERON:0010743;1.78e-09;2!UBERON:0004802;1.79e-08;19!UBERON:0000115;1.79e-08;19!UBERON:0002048;2.16e-07;22!UBERON:0004807;2.16e-07;22!UBERON:0000117;2.16e-07;22!UBERON:0000171;2.16e-07;22!UBERON:0000170;2.16e-07;22!UBERON:0001896;9.91e-07;3!UBERON:0005290;9.91e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,1.22e-17,1;UBERON:0007645,1.22e-17,1;UBERON:0007647,1.22e-17,1;UBERON:0010115,1.22e-17,1;UBERON:0000941,1.70e-17,1;UBERON:0001785,1.70e-17,1;UBERON:0002464,1.70e-17,1;UBERON:0004904,1.70e-17,1;UBERON:0001021,1.70e-17,1;UBERON:0003902,1.70e-17,1;UBERON:0005425,1.70e-17,1;UBERON:0002360,1.71e-09,2;UBERON:0000094,1.71e-09,2;UBERON:0010743,1.71e-09,2;UBERON:0003714,2.02e-09,2;UBERON:0005162,2.02e-09,2;UBERON:0000122,2.02e-09,2;UBERON:0004802,1.70e-08,19;UBERON:0000115,1.70e-08,19;UBERON:0002048,2.07e-07,22;UBERON:0000117,2.07e-07,22;UBERON:0000171,2.07e-07,22;UBERON:0000170,2.07e-07,22;UBERON:0005597,2.07e-07,22;UBERON:0000118,2.07e-07,22 | |||
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|short_description=p6@USH1C | |short_description=p6@USH1C | ||
}} | }} |
Latest revision as of 00:28, 17 September 2015
Short description: | p6@USH1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_USH1C_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | 0bp_to_ENST00000526181_5end |
EntrezGene: | USH1C |
HGNC: | 12597 |
UniProt: | E9PNW1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 1.70e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
dura mater | 1.22e-17 | 1 |
future meninx | 1.22e-17 | 1 |
ectomeninx | 1.22e-17 | 1 |
future dura mater | 1.22e-17 | 1 |
cranial nerve II | 1.70e-17 | 1 |
cranial nerve | 1.70e-17 | 1 |
nerve trunk | 1.70e-17 | 1 |
nerve connecting eye with brain | 1.70e-17 | 1 |
nerve | 1.70e-17 | 1 |
retinal neural layer | 1.70e-17 | 1 |
presumptive neural retina | 1.70e-17 | 1 |
meninx | 1.71e-09 | 2 |
membrane organ | 1.71e-09 | 2 |
meningeal cluster | 1.71e-09 | 2 |
neural tissue | 2.02e-09 | 2 |
multi cell component structure | 2.02e-09 | 2 |
neuron projection bundle | 2.02e-09 | 2 |
respiratory tract epithelium | 1.70e-08 | 19 |
lung epithelium | 1.70e-08 | 19 |
lung | 2.07e-07 | 22 |
respiratory tube | 2.07e-07 | 22 |
respiration organ | 2.07e-07 | 22 |
pair of lungs | 2.07e-07 | 22 |
lung primordium | 2.07e-07 | 22 |
lung bud | 2.07e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 1.31e-10 | 15 |
respiratory system cancer | 5.55e-10 | 16 |
carcinoma | 2.69e-07 | 106 |
lung large cell carcinoma | 5.80e-07 | 3 |