FFCP PHASE1:Hg19::chr4:185395590..185395627,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3660 | |EntrezGene=3660 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6117 | |HGNC=6117 | ||
|TSSclassifier=strong | |||
|UniProt=D6RB34 | |UniProt=D6RB34 | ||
|association_with_transcript=74bp_to_ENST00000504340,ENST00000512020_5end | |association_with_transcript=74bp_to_ENST00000504340,ENST00000512020_5end | ||
|cluster_id=chr4:185395590..185395627,- | |||
|coexpression_cluster_id=C1207 | |coexpression_cluster_id=C1207 | ||
|description=CAGE_peak_3_at_IRF2_5end | |description=CAGE_peak_3_at_IRF2_5end | ||
|id=chr4:185395590..185395627,- | |id=chr4:185395590..185395627,- | ||
|ontology_enrichment_celltype=CL:0000738!3.24e-50!140;CL:0002087!1.98e-44!119;CL:0002031!2.42e-41!124;CL:0000037!6.79e-37!172;CL:0000566!6.79e-37!172;CL:0000988!2.14e-36!182;CL:0002032!5.54e-35!165;CL:0000837!5.54e-35!165;CL:0002057!3.68e-24!42;CL:0000766!6.99e-24!76;CL:0002009!2.02e-22!65;CL:0002194!9.02e-22!63;CL:0000576!9.02e-22!63;CL:0000040!9.02e-22!63;CL:0000559!9.02e-22!63;CL:0000860!1.51e-21!45;CL:0000542!3.09e-20!53;CL:0000051!3.09e-20!53;CL:0000839!4.22e-20!70;CL:0000557!5.01e-20!71;CL:0000838!8.49e-20!52;CL:0000763!1.73e-15!112;CL:0000049!1.73e-15!112;CL:0000945!1.52e-13!24;CL:0000826!1.52e-13!24;CL:0000236!8.32e-09!14;CL:0002320!5.86e-08!365;CL:0000134!2.51e-07!358;CL:0000084!3.36e-07!25;CL:0000827!3.36e-07!25;CL:0000451!7.82e-07!10 | |ontology_enrichment_celltype=CL:0000738!3.24e-50!140;CL:0002087!1.98e-44!119;CL:0002031!2.42e-41!124;CL:0000037!6.79e-37!172;CL:0000566!6.79e-37!172;CL:0000988!2.14e-36!182;CL:0002032!5.54e-35!165;CL:0000837!5.54e-35!165;CL:0002057!3.68e-24!42;CL:0000766!6.99e-24!76;CL:0002009!2.02e-22!65;CL:0002194!9.02e-22!63;CL:0000576!9.02e-22!63;CL:0000040!9.02e-22!63;CL:0000559!9.02e-22!63;CL:0000860!1.51e-21!45;CL:0000542!3.09e-20!53;CL:0000051!3.09e-20!53;CL:0000839!4.22e-20!70;CL:0000557!5.01e-20!71;CL:0000838!8.49e-20!52;CL:0000763!1.73e-15!112;CL:0000049!1.73e-15!112;CL:0000945!1.52e-13!24;CL:0000826!1.52e-13!24;CL:0000236!8.32e-09!14;CL:0002320!5.86e-08!365;CL:0000134!2.51e-07!358;CL:0000084!3.36e-07!25;CL:0000827!3.36e-07!25;CL:0000451!7.82e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.73e-29;33!CL:0002057;1.73e-29;33!CL:0000576;9.45e-25;48!CL:0000473;1.24e-24;39!CL:0000234;1.24e-24;39!CL:0002087;2.52e-21;104!CL:0000945;2.03e-20;24!CL:0000738;2.30e-18;136!CL:0000766;1.76e-17;69!CL:0000542;2.08e-16;53!CL:0000236;7.04e-12;13!CL:0000988;7.09e-11;177!CL:0000451;1.99e-10;10!CL:0000990;5.66e-09;8!CL:0000084;9.96e-09;25!CL:0000219;6.28e-08;193!CL:0000763;1.14e-07;100!CL:0000791;2.45e-07;18!CL:0000789;2.45e-07;18!CL:0002419;2.45e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.48e-82,136;CL:0002087,4.54e-73,115;CL:0002031,4.16e-66,120;CL:0000037,5.35e-61,168;CL:0000988,2.32e-60,177;CL:0002032,4.03e-58,161;CL:0000837,4.03e-58,161;CL:0000766,4.40e-41,72;CL:0002009,4.16e-40,61;CL:0000860,1.81e-39,42;CL:0002057,1.81e-39,42;CL:0002194,5.07e-39,59;CL:0000576,5.07e-39,59;CL:0000040,5.07e-39,59;CL:0000559,5.07e-39,59;CL:0000473,8.03e-39,48;CL:0000234,8.03e-39,48;CL:0000557,4.51e-36,67;CL:0000839,3.76e-34,66;CL:0000542,4.79e-29,53;CL:0000051,4.79e-29,53;CL:0000838,2.54e-28,52;CL:0000763,1.18e-27,108;CL:0000049,1.18e-27,108;CL:0000945,2.02e-20,24;CL:0000826,2.02e-20,24;CL:0000236,5.44e-13,14;CL:0000134,5.14e-12,354;CL:0002320,1.56e-11,361;CL:0000451,2.14e-10,10;CL:0000990,6.17e-09,8;CL:0000084,7.60e-09,25;CL:0000827,7.60e-09,25;CL:0002393,1.83e-08,9;CL:0002397,1.83e-08,9;CL:0000219,2.58e-08,386;CL:0000791,1.79e-07,18;CL:0000789,1.79e-07,18;CL:0002420,1.79e-07,18;CL:0002419,1.79e-07,18;CL:0000790,1.79e-07,18;CL:0000048,4.10e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;1.88e-28;42!CL:0000051;2.08e-16;53!CL:0000049;8.69e-09;108!CL:0000790;2.45e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.15e-29!112;UBERON:0002390!6.25e-29!102;UBERON:0003061!6.25e-29!102;UBERON:0002405!4.51e-18!115;UBERON:0002371!5.14e-18!80;UBERON:0001474!2.79e-16!86;UBERON:0004765!8.85e-14!101;UBERON:0001434!8.85e-14!101;UBERON:0000178!9.59e-10!15;UBERON:0000179!9.59e-10!15;UBERON:0000463!9.59e-10!15;UBERON:0007023!5.34e-09!115;UBERON:0002384!5.56e-07!375 | |ontology_enrichment_uberon=UBERON:0002193!2.15e-29!112;UBERON:0002390!6.25e-29!102;UBERON:0003061!6.25e-29!102;UBERON:0002405!4.51e-18!115;UBERON:0002371!5.14e-18!80;UBERON:0001474!2.79e-16!86;UBERON:0004765!8.85e-14!101;UBERON:0001434!8.85e-14!101;UBERON:0000178!9.59e-10!15;UBERON:0000179!9.59e-10!15;UBERON:0000463!9.59e-10!15;UBERON:0007023!5.34e-09!115;UBERON:0002384!5.56e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.20e-15;15!UBERON:0000179;3.20e-15;15!UBERON:0000463;3.20e-15;15!UBERON:0002390;4.78e-10;32!UBERON:0002193;4.23e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.27e-49,108;UBERON:0002390,1.21e-48,98;UBERON:0003061,1.21e-48,98;UBERON:0002405,1.80e-35,93;UBERON:0002371,5.68e-31,76;UBERON:0001474,3.03e-27,82;UBERON:0004765,5.73e-24,90;UBERON:0001434,1.18e-19,100;UBERON:0000178,2.96e-15,15;UBERON:0000179,2.96e-15,15;UBERON:0000463,2.96e-15,15;UBERON:0003081,1.75e-14,203;UBERON:0002384,9.38e-11,371;UBERON:0002204,1.41e-07,167 | |||
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| ||
|short_description=p3@IRF2 | |short_description=p3@IRF2 | ||
}} | }} |
Latest revision as of 01:32, 17 September 2015
Short description: | p3@IRF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IRF2_5end |
Coexpression cluster: | C1207_migratory_granulocyte_CD19_CD14_immature_adult_Dendritic |
Association with transcript: | 74bp_to_ENST00000504340, ENST00000512020_5end |
EntrezGene: | IRF2 |
HGNC: | 6117 |
UniProt: | D6RB34 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.27e-49 | 108 |
hematopoietic system | 1.21e-48 | 98 |
blood island | 1.21e-48 | 98 |
immune system | 1.80e-35 | 93 |
bone marrow | 5.68e-31 | 76 |
bone element | 3.03e-27 | 82 |
skeletal element | 5.73e-24 | 90 |
skeletal system | 1.18e-19 | 100 |
blood | 2.96e-15 | 15 |
haemolymphatic fluid | 2.96e-15 | 15 |
organism substance | 2.96e-15 | 15 |
lateral plate mesoderm | 1.75e-14 | 203 |
connective tissue | 9.38e-11 | 371 |
musculoskeletal system | 1.41e-07 | 167 |