FFCP PHASE1:Hg19::chr12:123756321..123756339,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8099 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14002 | |||
|TSSclassifier=strong | |||
|UniProt=O14519 | |||
|association_with_transcript=347bp_to_ENST00000261692,NM_004642,uc001ueq.2_5end | |||
|cluster_id=chr12:123756321..123756339,- | |||
|description=CAGE_peak_2_at_CDK2AP1_5end | |||
|id=chr12:123756321..123756339,- | |||
|ontology_enrichment_celltype=CL:0000055!1.59e-31!180;CL:0000220!8.91e-21!246;CL:0002321!1.34e-20!248;CL:0000222!7.19e-20!119;CL:0000680!3.21e-15!57;CL:0000056!3.21e-15!57;CL:0000355!3.21e-15!57;CL:0000393!3.22e-15!60;CL:0000211!3.22e-15!60;CL:0000183!1.86e-14!59;CL:0000187!8.63e-14!54;CL:0000057!5.37e-13!75;CL:0002371!8.97e-13!591;CL:0000144!6.26e-12!625;CL:0000192!5.06e-11!42;CL:0000514!5.06e-11!42;CL:0000359!7.08e-10!32;CL:0000548!2.86e-09!679;CL:0000004!2.86e-09!679;CL:0000255!2.86e-09!679;CL:0000012!4.03e-09!682 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.71e-09;32!CL:0000187;3.65e-08;55!CL:0000192;4.22e-08;43!CL:0000393;7.42e-08;61!CL:0000211;7.42e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.40e-21,250;CL:0000222,5.66e-20,121;CL:0000393,3.78e-15,61;CL:0000211,3.78e-15,61;CL:0000680,3.85e-15,58;CL:0000056,3.85e-15,58;CL:0000355,3.85e-15,58;CL:0000187,1.02e-13,55;CL:0000057,4.66e-13,76;CL:0000192,6.09e-11,43;CL:0000514,6.09e-11,43;CL:0000359,6.83e-10,32;CL:0000115,8.60e-07,36;CL:0002078,9.81e-07,45 | |||
|ontology_enrichment_development_v019=CL:0000355;1.56e-08;58!CL:0000514;4.22e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.40e-18!83;UBERON:0002329!8.40e-18!83;UBERON:0003077!8.40e-18!83;UBERON:0003059!8.40e-18!83;UBERON:0007282!8.40e-18!83;UBERON:0009618!8.40e-18!83;UBERON:0007285!8.40e-18!83;UBERON:0000475!1.09e-17!365;UBERON:0000119!1.06e-16!312;UBERON:0000483!6.18e-16!309;UBERON:0002049!1.35e-15!79;UBERON:0007798!1.35e-15!79;UBERON:0004290!1.18e-14!70;UBERON:0000486!1.33e-14!82;UBERON:0000477!1.40e-14!286;UBERON:0005256!7.44e-14!143;UBERON:0001134!1.62e-13!61;UBERON:0002036!1.62e-13!61;UBERON:0003082!1.62e-13!61;UBERON:0004872!4.23e-13!84;UBERON:0004111!6.63e-13!241;UBERON:0000055!1.51e-12!69;UBERON:0002385!1.83e-12!63;UBERON:0001015!1.83e-12!63;UBERON:0000383!1.83e-12!63;UBERON:0001981!1.14e-11!60;UBERON:0007500!1.14e-11!60;UBERON:0004537!1.14e-11!60;UBERON:0006965!1.14e-11!60;UBERON:0003914!4.10e-11!118;UBERON:0004535!6.38e-11!110;UBERON:0001637!6.45e-11!42;UBERON:0003509!6.45e-11!42;UBERON:0004572!6.45e-11!42;UBERON:0000025!9.43e-11!194;UBERON:0000481!1.27e-10!347;UBERON:0001009!2.39e-10!113;UBERON:0000468!3.01e-10!659;UBERON:0002100!6.52e-10!216;UBERON:0000467!5.88e-09!625;UBERON:0000490!7.22e-09!138;UBERON:0000480!1.05e-08!626;UBERON:0004573!1.12e-08!33;UBERON:0004571!1.12e-08!33;UBERON:0004121!4.37e-08!169;UBERON:0003102!2.61e-07!95;UBERON:0000922!3.59e-07!612;UBERON:0002050!4.54e-07!605;UBERON:0005423!4.54e-07!605;UBERON:0000923!4.99e-07!604;UBERON:0005291!4.99e-07!604;UBERON:0006598!4.99e-07!604;UBERON:0002532!4.99e-07!604;UBERON:0000924!5.29e-07!173;UBERON:0006601!5.29e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.07e-08;33!UBERON:0004571;5.07e-08;33!UBERON:0001637;7.81e-08;42!UBERON:0003509;7.81e-08;42!UBERON:0004572;7.81e-08;42!UBERON:0007500;2.09e-07;56!UBERON:0001981;2.09e-07;56!UBERON:0004537;2.09e-07;56!UBERON:0002049;4.99e-07;75!UBERON:0007798;4.99e-07;75!UBERON:0003914;7.64e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,2.37e-17,309;UBERON:0007503,3.95e-17,78;UBERON:0000483,1.43e-16,306;UBERON:0002049,1.37e-15,78;UBERON:0007798,1.37e-15,78;UBERON:0002329,1.11e-14,71;UBERON:0003059,1.11e-14,71;UBERON:0007282,1.11e-14,71;UBERON:0004290,1.11e-14,71;UBERON:0009618,1.11e-14,71;UBERON:0007524,1.16e-14,73;UBERON:0000486,1.22e-14,83;UBERON:0003077,1.46e-14,72;UBERON:0007285,1.46e-14,72;UBERON:0001134,1.56e-13,62;UBERON:0002036,1.56e-13,62;UBERON:0003082,1.56e-13,62;UBERON:0004111,4.30e-13,240;UBERON:0004872,4.49e-13,83;UBERON:0000055,1.68e-12,68;UBERON:0002385,1.73e-12,64;UBERON:0001015,1.73e-12,64;UBERON:0000383,1.73e-12,64;UBERON:0007500,1.17e-11,59;UBERON:0001981,1.17e-11,59;UBERON:0004537,1.17e-11,59;UBERON:0006965,1.17e-11,59;UBERON:0003914,3.33e-11,117;UBERON:0001637,6.20e-11,42;UBERON:0003509,6.20e-11,42;UBERON:0004572,6.20e-11,42;UBERON:0000025,7.65e-11,192;UBERON:0005256,9.69e-11,122;UBERON:0004535,9.85e-11,109;UBERON:0001009,3.65e-10,112;UBERON:0000490,5.14e-10,148;UBERON:0003104,1.10e-09,160;UBERON:0009142,1.10e-09,160;UBERON:0004573,1.09e-08,33;UBERON:0004571,1.09e-08,33;UBERON:0003102,3.18e-08,99;UBERON:0010314,5.75e-08,132;UBERON:0004121,1.78e-07,171;UBERON:0000924,1.78e-07,171;UBERON:0006601,1.78e-07,171;UBERON:0002100,8.80e-07,199 | |||
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| |||
|short_description=p2@CDK2AP1 | |||
}} |
Latest revision as of 02:02, 17 September 2015
Short description: | p2@CDK2AP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDK2AP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 347bp_to_ENST00000261692, NM_004642, uc001ueq.2_5end |
EntrezGene: | CDK2AP1 |
HGNC: | 14002 |
UniProt: | O14519 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.40e-21 | 250 |
mesodermal cell | 5.66e-20 | 121 |
electrically responsive cell | 3.78e-15 | 61 |
electrically active cell | 3.78e-15 | 61 |
muscle precursor cell | 3.85e-15 | 58 |
myoblast | 3.85e-15 | 58 |
multi-potent skeletal muscle stem cell | 3.85e-15 | 58 |
muscle cell | 1.02e-13 | 55 |
fibroblast | 4.66e-13 | 76 |
smooth muscle cell | 6.09e-11 | 43 |
smooth muscle myoblast | 6.09e-11 | 43 |
vascular associated smooth muscle cell | 6.83e-10 | 32 |
endothelial cell | 8.60e-07 | 36 |
meso-epithelial cell | 9.81e-07 | 45 |