FFCP PHASE1:Hg19::chr1:25291475..25291511,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=864 | |EntrezGene=864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10473 | |HGNC=10473 | ||
|TSSclassifier=strong | |||
|UniProt=B1AJV5,Q13761 | |UniProt=B1AJV5,Q13761 | ||
|association_with_transcript=0bp_to_ENST00000338888,ENST00000399916,NM_001031680,uc001bjr.2,uc009vrj.2,uc009vrk.2_5end | |association_with_transcript=0bp_to_ENST00000338888,ENST00000399916,NM_001031680,uc001bjr.2,uc009vrj.2,uc009vrk.2_5end | ||
|cluster_id=chr1:25291475..25291511,- | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_2_at_RUNX3_5end | |description=CAGE_peak_2_at_RUNX3_5end | ||
|id=chr1:25291475..25291511,- | |id=chr1:25291475..25291511,- | ||
|ontology_enrichment_celltype=CL:0000037!2.14e-43!172;CL:0000566!2.14e-43!172;CL:0000988!5.82e-42!182;CL:0000738!5.10e-40!140;CL:0002032!1.54e-39!165;CL:0000837!1.54e-39!165;CL:0002031!2.25e-29!124;CL:0002087!3.18e-29!119;CL:0000763!1.18e-21!112;CL:0000049!1.18e-21!112;CL:0000542!1.01e-16!53;CL:0000051!1.01e-16!53;CL:0000838!2.33e-16!52;CL:0000766!1.25e-15!76;CL:0000084!2.75e-14!25;CL:0000827!2.75e-14!25;CL:0000557!9.05e-14!71;CL:0000134!1.35e-13!358;CL:0002320!3.38e-13!365;CL:0002057!9.53e-13!42;CL:0002009!1.54e-12!65;CL:0000791!1.86e-12!18;CL:0000789!1.86e-12!18;CL:0002420!1.86e-12!18;CL:0002419!1.86e-12!18;CL:0000790!1.86e-12!18;CL:0000839!4.55e-12!70;CL:0000860!1.07e-11!45;CL:0002194!2.93e-11!63;CL:0000576!2.93e-11!63;CL:0000040!2.93e-11!63;CL:0000559!2.93e-11!63;CL:0000219!5.83e-10!390;CL:0000625!7.31e-09!11 | |ontology_enrichment_celltype=CL:0000037!2.14e-43!172;CL:0000566!2.14e-43!172;CL:0000988!5.82e-42!182;CL:0000738!5.10e-40!140;CL:0002032!1.54e-39!165;CL:0000837!1.54e-39!165;CL:0002031!2.25e-29!124;CL:0002087!3.18e-29!119;CL:0000763!1.18e-21!112;CL:0000049!1.18e-21!112;CL:0000542!1.01e-16!53;CL:0000051!1.01e-16!53;CL:0000838!2.33e-16!52;CL:0000766!1.25e-15!76;CL:0000084!2.75e-14!25;CL:0000827!2.75e-14!25;CL:0000557!9.05e-14!71;CL:0000134!1.35e-13!358;CL:0002320!3.38e-13!365;CL:0002057!9.53e-13!42;CL:0002009!1.54e-12!65;CL:0000791!1.86e-12!18;CL:0000789!1.86e-12!18;CL:0002420!1.86e-12!18;CL:0002419!1.86e-12!18;CL:0000790!1.86e-12!18;CL:0000839!4.55e-12!70;CL:0000860!1.07e-11!45;CL:0002194!2.93e-11!63;CL:0000576!2.93e-11!63;CL:0000040!2.93e-11!63;CL:0000559!2.93e-11!63;CL:0000219!5.83e-10!390;CL:0000625!7.31e-09!11 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.17e-16;25!CL:0000860;1.02e-13;33!CL:0002057;1.02e-13;33!CL:0000791;1.64e-13;18!CL:0000789;1.64e-13;18!CL:0002419;1.64e-13;18!CL:0000625;1.96e-11;11!CL:0002087;2.32e-11;104!CL:0000576;7.04e-09;48!CL:0000542;7.39e-09;53!CL:0000473;2.20e-08;39!CL:0000234;2.20e-08;39!CL:0000738;4.49e-08;136!CL:0000453;9.83e-08;5!CL:0000988;2.92e-07;177!CL:0000766;4.75e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.18e-45,177;CL:0000037,5.41e-45,168;CL:0002032,7.60e-42,161;CL:0000837,7.60e-42,161;CL:0000738,3.79e-40,136;CL:0002087,6.08e-30,115;CL:0002031,5.18e-29,120;CL:0000763,7.09e-23,108;CL:0000049,7.09e-23,108;CL:0000542,1.23e-17,53;CL:0000051,1.23e-17,53;CL:0000838,3.65e-17,52;CL:0000084,9.43e-17,25;CL:0000827,9.43e-17,25;CL:0000134,7.43e-15,354;CL:0002320,2.25e-14,361;CL:0000766,2.60e-14,72;CL:0000791,1.25e-13,18;CL:0000789,1.25e-13,18;CL:0002420,1.25e-13,18;CL:0002419,1.25e-13,18;CL:0000790,1.25e-13,18;CL:0000860,6.41e-13,42;CL:0002057,6.41e-13,42;CL:0000557,9.35e-13,67;CL:0002009,2.60e-12,61;CL:0000219,1.26e-11,386;CL:0000625,1.74e-11,11;CL:0000839,6.70e-11,66;CL:0002194,9.32e-11,59;CL:0000576,9.32e-11,59;CL:0000040,9.32e-11,59;CL:0000559,9.32e-11,59;CL:0000473,3.01e-10,48;CL:0000234,3.01e-10,48;CL:0000453,1.01e-07,5;CL:0000048,1.99e-07,427;CL:0000034,4.88e-07,441;CL:0000723,6.02e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000790;1.64e-13;18!CL:0002057;6.99e-10;42!CL:0000051;7.39e-09;53 | |||
|ontology_enrichment_disease=DOID:2531!6.66e-10!51;DOID:0060083!6.66e-10!51;DOID:1240!2.98e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;8.52e-08;39!DOID:8692;1.99e-07;31!DOID:2531;3.98e-07;51!DOID:0060083;3.98e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,9.03e-12,51;DOID:0060083,9.03e-12,51;DOID:1240,6.44e-10,39;DOID:8692,9.38e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.62e-24!102;UBERON:0003061!6.62e-24!102;UBERON:0002193!2.58e-21!112;UBERON:0001474!1.76e-15!86;UBERON:0002371!7.31e-14!80;UBERON:0004765!2.49e-13!101;UBERON:0001434!2.49e-13!101;UBERON:0002384!3.24e-13!375;UBERON:0002405!7.04e-13!115;UBERON:0007023!6.96e-08!115;UBERON:0000178!1.20e-07!15;UBERON:0000179!1.20e-07!15;UBERON:0000463!1.20e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!6.62e-24!102;UBERON:0003061!6.62e-24!102;UBERON:0002193!2.58e-21!112;UBERON:0001474!1.76e-15!86;UBERON:0002371!7.31e-14!80;UBERON:0004765!2.49e-13!101;UBERON:0001434!2.49e-13!101;UBERON:0002384!3.24e-13!375;UBERON:0002405!7.04e-13!115;UBERON:0007023!6.96e-08!115;UBERON:0000178!1.20e-07!15;UBERON:0000179!1.20e-07!15;UBERON:0000463!1.20e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002390;2.44e-10;32!UBERON:0000178;8.43e-08;15!UBERON:0000179;8.43e-08;15!UBERON:0000463;8.43e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.84e-24,98;UBERON:0003061,5.84e-24,98;UBERON:0002193,3.73e-22,108;UBERON:0002405,3.69e-16,93;UBERON:0001474,3.20e-15,82;UBERON:0002384,4.25e-14,371;UBERON:0004765,2.39e-13,90;UBERON:0002371,5.78e-13,76;UBERON:0001434,3.63e-12,100;UBERON:0004177,2.36e-08,7;UBERON:0005057,2.36e-08,7;UBERON:0000178,9.37e-08,15;UBERON:0000179,9.37e-08,15;UBERON:0000463,9.37e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,107.590075293115,102.461535633532,101.458197113333,7.08055698328027,12.2825407391108,5.41856431606266,0,0,0,0,0.995184627411951,0.293600439334847,2.21598163412751,2.60707781711184,8.02940221648652,0.895661896959697,1.29557466407592,0.257575567634187,2.4717700592526,5.29026321164333,3.63876091781724,1.16214518452842,5.34518254428373,4.02618282163635,3.16461631554365,4.61089271752381,2.83778675866302,1.37898272294647,3.87290810150296,0,3.20011977222428,5.18521685109907,5.8428105955722,3.06083892370903,4.17207735198922,1.91801137739712,2.30895910130701,3.19141852194611,3.83602275479425,0,3.97169657283798,1.86846674698672,2.76373531782418,4.69334626578181,3.69221035998698,1.21079900526674,2.94622108790052,0.949387162322653,0.211255286311942,0.212604299965044,0,0.22465726229299,0,0.16072558669708,0.285012743741249,0,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0,1.17447437874188,2.6759125968766,3.96513985737078,7.28661131875997,0.263384084775077,26.1623994251398,5.50215067848831,7.40165396398233,2.00623794468814,0.32592226663359,0,0,6.68462741311041,0.883817722424512,0.664601683750863,0.541607727530031,3.71464827204458,6.50296737799391,22.0346792168926,25.7005516540839,34.4865672024712,1.63115219478266,0.267540828089713,1.04535523804977,15.6366892922641,1.91610246800961,2.06176467289578,3.28925599625354,3.82278497188916,11.0684187155591,2.85135613334512,7.82990619204418,8.31912972503719,6.24653632761729,4.02521328474829,2.46338399076314,44.7566969958906,30.2207421235363,74.8742168074071,0,0,0,0,0,0,0,0,0,0,0.263504357079378,2.22664428346111,0,0,0.324547393654683,0,0.797747763113191,1.19245312152671,0.571994910780128,4.45749001595478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0.323745888736263,0.140450806702248,0,0.368502951935304,0,7.12801714369232,0.741800787835671,0,0,0.168336113954066,0.625592599359821,0,5.70670907145089,0.919463387397059,3.75595147266492,0,1.97328599257748,0.427114777637135,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,3.12899064659632,0.643240938192885,5.52539685409922,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,1.40241773803446,0,0,1.26755034821831,0,0.590789906681404,3.97316789473185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,6.89728533054321,0.176096868026452,3.10992173311158,0.720599767084807,1.00993946741104,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,4.37252536245642,1.41849132023278,2.66422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.058227885398,31.1308601119045,20.4846196116541,44.0216614439537,0,0,0,0,0,0.749007023947182,0,2.48649308061621,0,1.50051156317903,0.271265023699736,0,0,0,0,1.20378439891088,0,0,3.32112799267718,2.76553752812555,0,0,0,13.6466897241106,5.1771408196468,11.6333038005754,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,46.9751354518102,35.644103965694,0,0,0,0,0,0,0,0,0,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.470719003883896,0,0,0,0,3.04468565539302,0.764637207142375,0.569647187174163,2.38231775457789,1.64544909234478,1.94541993357815,1.08006287447623,1.58625035258854,0,0,0,1.48642540100575,0,46.384481863166,0,43.9074617152197,3.4470966623826,102.238340455635,0,0,5.24939761776342,0.313359791546046,20.0507581672054,54.1733688965131,24.8911516410734,7.46658916606876,6.81353980304522,2.74804275804612,1.84344458585075,2.01308497103174,1.66849141711908,3.32159762183469,10.8578407819145,0,0,17.3197423358866,0,0,0,0,4.01196183398922,0,0,0.296964680832639,0,0,0,0,40.3769491855561,0,4.38345574152353,18.787306256118,0,0,26.2170635632078,0,0,0,20.4628948090749,1.67693789582787,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0,1.38510465306835,0.113942055847001,0,0,0,2.23300811812344,0.183195186803725,0,0,29.8262487150547,0,0,0,0,0,0,0,0,0,0,6.96683351754953,9.28804427285061,5.49927130440263,25.7973381952141,18.7817187198684,19.2136387090038,0.471807930864739,0,0,0.364909578431332,0,0,0,6.04953580243319,0,1.70603764996917,0,0,0,0,0.627865836814451,0,0,0,0,0,0.0870592065804026,0.873633341210151,0,0.0967563312890851,0,0,2.13375836274523,0,0.451961481561065,12.3337732182076,0,0.0633107959558787,0,0.160317640503067,2.56143593687223,0,0,0,0,0,0,0,0,0,4.6919180112708,1.73370353940911,0,0.136905378891993,0,0,83.0724039522634,0.279282401272254,0.229160424011684,0,0.399358000997982,0,0,0.268733889946905,0,0,0,0,0,0,27.3494862572484,1.59045937961861,0,0,0,0,130.259883208319,148.569975275126,0.0607495566580247,0,0.394028536495991,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.681552087141687,0,0.293104467356165,1.32506888912221,0,0,0,0,1.9221734262185,1.72924735609633,5.38510771951354,5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| ||
|short_description=p2@RUNX3 | |short_description=p2@RUNX3 | ||
}} | }} |
Latest revision as of 02:41, 17 September 2015
Short description: | p2@RUNX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RUNX3_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 0bp_to_ENST00000338888, ENST00000399916, NM_001031680, uc001bjr.2, uc009vrj.2, uc009vrk.2_5end |
EntrezGene: | RUNX3 |
HGNC: | 10473 |
UniProt: | B1AJV5Q13761 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.84e-24 | 98 |
blood island | 5.84e-24 | 98 |
hemolymphoid system | 3.73e-22 | 108 |
immune system | 3.69e-16 | 93 |
bone element | 3.20e-15 | 82 |
connective tissue | 4.25e-14 | 371 |
skeletal element | 2.39e-13 | 90 |
bone marrow | 5.78e-13 | 76 |
skeletal system | 3.63e-12 | 100 |
hemopoietic organ | 2.36e-08 | 7 |
immune organ | 2.36e-08 | 7 |
blood | 9.37e-08 | 15 |
haemolymphatic fluid | 9.37e-08 | 15 |
organism substance | 9.37e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 9.03e-12 | 51 |
immune system cancer | 9.03e-12 | 51 |
leukemia | 6.44e-10 | 39 |
myeloid leukemia | 9.38e-08 | 31 |