FFCP PHASE1:Hg19::chr11:18656006..18656027,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144108 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26818 | |||
|TSSclassifier=strong | |||
|UniProt=C9JCH5,Q68D10 | |||
|association_with_transcript=0bp_to_ENST00000333429,NM_194285,uc001moy.2,uc010rdi.1_5end | |||
|cluster_id=chr11:18656006..18656027,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_5_at_SPTY2D1_5end | |||
|id=chr11:18656006..18656027,- | |||
|ontology_enrichment_celltype=CL:0000766!9.06e-33!76;CL:0000839!2.44e-29!70;CL:0000557!2.81e-29!71;CL:0002009!3.14e-27!65;CL:0002194!1.48e-26!63;CL:0000576!1.48e-26!63;CL:0000040!1.48e-26!63;CL:0000559!1.48e-26!63;CL:0002057!3.21e-25!42;CL:0000860!4.34e-24!45;CL:0000763!6.35e-21!112;CL:0000049!6.35e-21!112;CL:0000738!2.14e-20!140;CL:0002031!5.85e-18!124;CL:0002087!1.94e-15!119;CL:0002032!1.40e-14!165;CL:0000837!1.40e-14!165;CL:0000037!4.11e-14!172;CL:0000566!4.11e-14!172;CL:0000988!7.19e-12!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.41e-46;33!CL:0002057;1.41e-46;33!CL:0000473;3.92e-42;39!CL:0000234;3.92e-42;39!CL:0000576;1.58e-34;48!CL:0000766;5.23e-30;69!CL:0000763;3.04e-14;100!CL:0000094;3.63e-10;8!CL:0002087;6.95e-09;104!CL:0000738;9.25e-09;136!CL:0000081;5.74e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.23e-61,72;CL:0000473,5.51e-59,48;CL:0000234,5.51e-59,48;CL:0000839,4.97e-55,66;CL:0000860,1.13e-54,42;CL:0002057,1.13e-54,42;CL:0002194,1.97e-53,59;CL:0000576,1.97e-53,59;CL:0000040,1.97e-53,59;CL:0000559,1.97e-53,59;CL:0000557,3.10e-53,67;CL:0002009,3.53e-53,61;CL:0000763,1.46e-40,108;CL:0000049,1.46e-40,108;CL:0000738,2.65e-31,136;CL:0002031,4.16e-29,120;CL:0002087,5.07e-26,115;CL:0002032,1.92e-25,161;CL:0000837,1.92e-25,161;CL:0000037,1.75e-24,168;CL:0000988,3.38e-22,177;CL:0000094,3.51e-10,8;CL:0000081,5.60e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.99e-39;42!CL:0000049;1.12e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.25e-28!112;UBERON:0002390!2.18e-27!102;UBERON:0003061!2.18e-27!102;UBERON:0002371!6.57e-24!80;UBERON:0001474!1.63e-20!86;UBERON:0002405!3.44e-20!115;UBERON:0004765!2.90e-16!101;UBERON:0001434!2.90e-16!101;UBERON:0007023!2.47e-13!115;UBERON:0003081!3.65e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.39e-07;15!UBERON:0000179;4.39e-07;15!UBERON:0000463;4.39e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.07e-53,98;UBERON:0003061,7.07e-53,98;UBERON:0002193,3.89e-52,108;UBERON:0002371,7.49e-47,76;UBERON:0002405,2.18e-45,93;UBERON:0001474,4.09e-42,82;UBERON:0004765,8.59e-37,90;UBERON:0001434,2.34e-31,100;UBERON:0003081,2.26e-21,203;UBERON:0002204,5.09e-15,167;UBERON:0000926,5.42e-12,315;UBERON:0004120,5.42e-12,315;UBERON:0006603,5.42e-12,315;UBERON:0007023,2.61e-07,114;UBERON:0000178,4.01e-07,15;UBERON:0000179,4.01e-07,15;UBERON:0000463,4.01e-07,15 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0.522371256399677,0,0,0,0,0.495065411840187,0,0.672325146451775,0,0.730310090387373,0,0.123121058076788,0,0,0,0.273748850145768,0,0.0764134057479513,0.0821005894499457,0.236132343941038,3.93364276848904,0.383829398097213,2.01260960310899,0,0,0.369754010166788,0.0774672005803016,0.142169232487422,0,0,1.00272223735071,1.73608696572681,4.03047853631864,2.91504299417082,4.37878464978117,3.92575244704825,6.80176698639857,7.03493777444667,9.0647324393217,11.9238687526329,14.5561994320699,12.6584652621746,9.73410684810582,11.3511470346521,18.6162667597774,14.846147722428,14.8969135253776,8.84738995850242,12.0078706025452,9.66310983113864,12.2433556948361,19.8975996787178,18.5407766481722,6.92687730392104,5.38551875578406,6.39337125799041,21.7656928971438,30.0714169086304,20.553134216854,10.80369260604,13.037072960505,11.9453864587814,10.2917915447673,24.3063239751793,18.6712808590122,1.26753171787165,1.91343869968539,0.628975936525128,2.3589012540764,3.15371474967163,5.46466994770072,1.42506371870624,1.79025009479181,1.82664153764634,0,0.546138611262131,0,0.853460445133014,0.400395987036012,0,1.98313461835459,0.954053754535364,1.1384259382189,0,0,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0.411202997999018,1.00311897234407,0.651844533267181,0,0,0.557052284425868,0,0,1.08321545506006,0.768547918354051,0,0.493313713811028,0.829050053357545,1.73881851441031,0.444859689486181,0.535081656179426,0,0.566546713487831,1.14966148080576,0.34362744548263,0.759059076058509,0.637130828648193,0,0.950452044448374,0.752875595388864,0.383959833463255,0,1.18388626022008,0.821127996921047,0.201606743224732,0,0,0,0,0.383587685530591,0,0,0.144846518960824,0,0,0.189069634328136,0,0,0.523916301990851,0,0,0.97364218096405,1.74129737299267,0.797747763113191,0,0,0,0.993812036833525,0,0.347140501607594,0.56530794192401,0,0,0.208994966536811,1.03366703667732,0,1.00416183829401,0,0.760272105718513,0.24406205754817,0,0,0.535798369704479,0.44905874525234,0.225222960966644,0,0,0,47.4409502769828,50.4114343392823,0,0,0.12663051166458,0.264818361626438,0,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0.587172493218824,0.485618833104395,0.280901613404497,0.204154171254893,0.122834317311768,0.103325781175765,0,0.247266929278557,0,1.43723628363248,0.168336113954066,0.375355559615893,0.277064115484183,0,0,0.300476117813194,0.226864366320042,0.538168907066586,0.213557388818567,0.211931901159562,0,0.309157587715317,0.257640540045629,0.744467425326359,0.337552664482532,0.194874010322397,0.504867548488229,0.184099797284599,0.161646056818812,0.710019185033229,0.201504196455281,0,1.35282597214308,0,0.860413786167011,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0.464367928031979,0,0.118306800039844,0.337169380156203,0.482022059766964,0.110293972732394,0.435758888184812,0,0,0.392442930250692,0.38474715694639,0,0,0,0,2.53510069643662,0,1.77236972004421,0.441463099414651,0.368965315629341,0.343135620597051,0.329250856225877,0,0.201057944823262,0.462942225792648,0.325808305310325,0,0,0,0.117408694235822,0.433099343283221,0.462985512576611,0.190254152234598,0,0,2.21595305478658,0.468008530278475,1.18904929830983,0,0.16798212819886,0.708875486211932,0.447792613514241,0.871901815541886,0,0.985326475791887,0.44024217006613,0.621984346622316,2.45003920808834,1.64115163454294,0.126995788584338,0,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0.224262168690721,0,0.1466765716419,0.258543431515556,0,0.845302752556,0,0,0,0,0.266422179016099,0.285955987316295,0,0.823240336780769,0.325736184293735,0.355391948742546,0,0,0.871533458600294,0.099972991182057,2.43247561282381,2.00902836572851,2.10833939483032,0.239624855491583,0,0,0.289562613335158,0,0.179060963239896,0.112085143993527,0.197030760201927,0.431255149719035,0.128343036279748,0,1.30139853857622,0.773288812777695,0.167516265334349,0,34.4543231015704,2.99161459204025,25.2793463195982,0.12269149171914,0.500170521059677,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0.300946099727719,0,0,0.664225598535437,0,0.173767228936166,0,0,0.413536052245775,1.50999940573032,0.426910231213777,1.5156378572313,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0.462629081407967,0.177561725313127,0.246381468041427,0,0.232420756919918,0.483437798366489,0,3.03867263488458,0.114814448164607,0.182091168006717,0.524497659837696,0,0.308061348417659,0,0,0.105551628892876,0,0.340187410553031,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,2.85037839639715,2.87578996127391,0.256450125116389,0,0,1.854738209659,0.183138929636687,0.247528499761764,0,0.650060246036521,0,0.193341436584244,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.178064071293475,0.495854746082934,0.192190067365106,0.510450849978337,1.71968227454435,0.464845549297286,0.62962469366128,0.6970372701606,0,0,0,0,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| |||
|short_description=p5@SPTY2D1 | |||
}} |
Latest revision as of 03:29, 17 September 2015
Short description: | p5@SPTY2D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SPTY2D1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000333429, NM_194285, uc001moy.2, uc010rdi.1_5end |
EntrezGene: | SPTY2D1 |
HGNC: | 26818 |
UniProt: | C9JCH5Q68D10 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.23e-61 | 72 |
defensive cell | 5.51e-59 | 48 |
phagocyte | 5.51e-59 | 48 |
myeloid lineage restricted progenitor cell | 4.97e-55 | 66 |
classical monocyte | 1.13e-54 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-54 | 42 |
monopoietic cell | 1.97e-53 | 59 |
monocyte | 1.97e-53 | 59 |
monoblast | 1.97e-53 | 59 |
promonocyte | 1.97e-53 | 59 |
granulocyte monocyte progenitor cell | 3.10e-53 | 67 |
macrophage dendritic cell progenitor | 3.53e-53 | 61 |
myeloid cell | 1.46e-40 | 108 |
common myeloid progenitor | 1.46e-40 | 108 |
leukocyte | 2.65e-31 | 136 |
hematopoietic lineage restricted progenitor cell | 4.16e-29 | 120 |
nongranular leukocyte | 5.07e-26 | 115 |
hematopoietic oligopotent progenitor cell | 1.92e-25 | 161 |
hematopoietic multipotent progenitor cell | 1.92e-25 | 161 |
hematopoietic stem cell | 1.75e-24 | 168 |
hematopoietic cell | 3.38e-22 | 177 |
granulocyte | 3.51e-10 | 8 |
blood cell | 5.60e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.07e-53 | 98 |
blood island | 7.07e-53 | 98 |
hemolymphoid system | 3.89e-52 | 108 |
bone marrow | 7.49e-47 | 76 |
immune system | 2.18e-45 | 93 |
bone element | 4.09e-42 | 82 |
skeletal element | 8.59e-37 | 90 |
skeletal system | 2.34e-31 | 100 |
lateral plate mesoderm | 2.26e-21 | 203 |
musculoskeletal system | 5.09e-15 | 167 |
mesoderm | 5.42e-12 | 315 |
mesoderm-derived structure | 5.42e-12 | 315 |
presumptive mesoderm | 5.42e-12 | 315 |
adult organism | 2.61e-07 | 114 |
blood | 4.01e-07 | 15 |
haemolymphatic fluid | 4.01e-07 | 15 |
organism substance | 4.01e-07 | 15 |