FFCP PHASE1:Hg19::chr17:7018100..7018111,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=433 | |EntrezGene=433 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=743 | |HGNC=743 | ||
|TSSclassifier=strong | |||
|UniProt=P07307 | |UniProt=P07307 | ||
|association_with_transcript=16bp_to_ENST00000380952_5end | |association_with_transcript=16bp_to_ENST00000380952_5end | ||
|cluster_id=chr17:7018100..7018111,- | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_4_at_ASGR2_5end | |description=CAGE_peak_4_at_ASGR2_5end | ||
|id=chr17:7018100..7018111,- | |id=chr17:7018100..7018111,- | ||
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|ontology_enrichment_celltype_v019_2=CL:0000860,4.51e-104,42;CL:0002057,4.51e-104,42;CL:0000473,6.80e-90,48;CL:0000234,6.80e-90,48;CL:0002194,4.81e-70,59;CL:0000576,4.81e-70,59;CL:0000040,4.81e-70,59;CL:0000559,4.81e-70,59;CL:0002009,1.75e-67,61;CL:0000766,6.24e-63,72;CL:0000839,9.50e-62,66;CL:0000557,1.05e-60,67;CL:0000763,3.55e-41,108;CL:0000049,3.55e-41,108;CL:0002087,1.14e-35,115;CL:0000738,1.62e-32,136;CL:0002031,4.84e-30,120;CL:0000037,6.10e-26,168;CL:0002032,1.67e-24,161;CL:0000837,1.67e-24,161;CL:0000988,4.03e-24,177;CL:0000182,8.06e-15,12;CL:0000134,1.09e-12,354;CL:0002320,3.13e-12,361;CL:0000219,1.30e-10,386;CL:0000048,1.21e-08,427;CL:0000723,2.25e-08,433;CL:0000034,5.04e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.80e-75;42!UBERON:0004161;7.92e-16;11!UBERON:0009497;3.21e-13;13!CL:0000049;6.56e-12;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@ASGR2 | |short_description=p4@ASGR2 | ||
}} | }} |
Latest revision as of 03:44, 17 September 2015
Short description: | p4@ASGR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ASGR2_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | 16bp_to_ENST00000380952_5end |
EntrezGene: | ASGR2 |
HGNC: | 743 |
UniProt: | P07307 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.51e-104 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.51e-104 | 42 |
defensive cell | 6.80e-90 | 48 |
phagocyte | 6.80e-90 | 48 |
monopoietic cell | 4.81e-70 | 59 |
monocyte | 4.81e-70 | 59 |
monoblast | 4.81e-70 | 59 |
promonocyte | 4.81e-70 | 59 |
macrophage dendritic cell progenitor | 1.75e-67 | 61 |
myeloid leukocyte | 6.24e-63 | 72 |
myeloid lineage restricted progenitor cell | 9.50e-62 | 66 |
granulocyte monocyte progenitor cell | 1.05e-60 | 67 |
myeloid cell | 3.55e-41 | 108 |
common myeloid progenitor | 3.55e-41 | 108 |
nongranular leukocyte | 1.14e-35 | 115 |
leukocyte | 1.62e-32 | 136 |
hematopoietic lineage restricted progenitor cell | 4.84e-30 | 120 |
hematopoietic stem cell | 6.10e-26 | 168 |
hematopoietic oligopotent progenitor cell | 1.67e-24 | 161 |
hematopoietic multipotent progenitor cell | 1.67e-24 | 161 |
hematopoietic cell | 4.03e-24 | 177 |
hepatocyte | 8.06e-15 | 12 |
mesenchymal cell | 1.09e-12 | 354 |
connective tissue cell | 3.13e-12 | 361 |
motile cell | 1.30e-10 | 386 |
multi fate stem cell | 1.21e-08 | 427 |
somatic stem cell | 2.25e-08 | 433 |
stem cell | 5.04e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.62e-52 | 76 |
hematopoietic system | 1.89e-48 | 98 |
blood island | 1.89e-48 | 98 |
bone element | 4.80e-48 | 82 |
hemolymphoid system | 1.63e-45 | 108 |
immune system | 7.26e-44 | 93 |
skeletal element | 5.30e-43 | 90 |
skeletal system | 8.00e-38 | 100 |
musculoskeletal system | 4.42e-19 | 167 |
lateral plate mesoderm | 2.02e-18 | 203 |
liver | 8.58e-15 | 19 |
digestive gland | 8.58e-15 | 19 |
liver bud | 8.58e-15 | 19 |
epithelium of foregut-midgut junction | 4.16e-13 | 25 |
anatomical boundary | 4.16e-13 | 25 |
hepatobiliary system | 4.16e-13 | 25 |
foregut-midgut junction | 4.16e-13 | 25 |
septum transversum | 4.16e-13 | 25 |
hepatic diverticulum | 1.61e-12 | 22 |
liver primordium | 1.61e-12 | 22 |
digestive tract diverticulum | 6.78e-12 | 23 |
connective tissue | 1.33e-11 | 371 |
epithelial sac | 8.52e-11 | 25 |
sac | 2.61e-10 | 26 |
mesoderm | 1.57e-08 | 315 |
mesoderm-derived structure | 1.57e-08 | 315 |
presumptive mesoderm | 1.57e-08 | 315 |
exocrine gland | 2.35e-08 | 31 |
exocrine system | 2.35e-08 | 31 |
endocrine gland | 3.36e-07 | 35 |
gut epithelium | 3.82e-07 | 54 |