FFCP PHASE1:Hg19::chr8:21914242..21914253,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2039 | |EntrezGene=2039 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3382 | |HGNC=3382 | ||
|TSSclassifier=strong | |||
|UniProt=E5RFK4 | |UniProt=E5RFK4 | ||
|association_with_transcript=-162bp_to_ENST00000520174_5end | |association_with_transcript=-162bp_to_ENST00000520174_5end | ||
|cluster_id=chr8:21914242..21914253,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_18_at_EPB49_5end | |description=CAGE_peak_18_at_EPB49_5end | ||
|id=chr8:21914242..21914253,+ | |id=chr8:21914242..21914253,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;2.72e-15;2!CL:0000558;2.72e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.72e-15,2;CL:0000765,2.72e-15,2;CL:0000050,2.72e-15,2;CL:0000038,2.72e-15,2;CL:0000558,2.72e-15,2;CL:0000547,2.72e-15,2;CL:0000549,2.72e-15,2;CL:0000550,2.72e-15,2;CL:0000552,2.72e-15,2 | |||
|ontology_enrichment_development_v019=UBERON:0006222;4.10e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.74e-45!115;UBERON:0001049!6.70e-38!57;UBERON:0005068!6.70e-38!57;UBERON:0006241!6.70e-38!57;UBERON:0007135!6.70e-38!57;UBERON:0002780!8.17e-35!41;UBERON:0001890!8.17e-35!41;UBERON:0006240!8.17e-35!41;UBERON:0002616!5.59e-34!59;UBERON:0003080!8.21e-34!42;UBERON:0001893!9.99e-34!34;UBERON:0002020!1.41e-33!34;UBERON:0003528!1.41e-33!34;UBERON:0001869!2.31e-33!32;UBERON:0001017!7.39e-32!82;UBERON:0002791!8.55e-32!33;UBERON:0005743!1.26e-31!86;UBERON:0000955!3.19e-31!69;UBERON:0006238!3.19e-31!69;UBERON:0003075!4.75e-30!86;UBERON:0007284!4.75e-30!86;UBERON:0002619!7.02e-30!22;UBERON:0002346!3.10e-28!90;UBERON:0000073!1.28e-27!94;UBERON:0001016!1.28e-27!94;UBERON:0001950!3.00e-26!20;UBERON:0000956!8.05e-26!25;UBERON:0000203!8.05e-26!25;UBERON:0003056!2.03e-24!61;UBERON:0000178!1.16e-18!15;UBERON:0000179!1.16e-18!15;UBERON:0000463!1.16e-18!15;UBERON:0000153!1.83e-17!129;UBERON:0007811!1.83e-17!129;UBERON:0000033!1.28e-16!123;UBERON:0001871!3.59e-14!7;UBERON:0004121!2.65e-13!169;UBERON:0000924!9.48e-13!173;UBERON:0006601!9.48e-13!173;UBERON:0000349!8.01e-12!5;UBERON:0000369!1.21e-10!4;UBERON:0002435!1.21e-10!4;UBERON:0000204!1.21e-10!4;UBERON:0010082!1.21e-10!4;UBERON:0000200!1.84e-10!6;UBERON:0002420!1.50e-09!9;UBERON:0007245!1.50e-09!9;UBERON:0010009!1.50e-09!9;UBERON:0010011!1.50e-09!9;UBERON:0000454!1.50e-09!9;UBERON:0002308!3.87e-09!9;UBERON:0000125!3.87e-09!9;UBERON:0005383!2.41e-08!3;UBERON:0005382!2.41e-08!3;UBERON:0002771!3.07e-08!3;UBERON:0001872!4.00e-08!5;UBERON:0000025!8.72e-08!194;UBERON:0000988!4.05e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!4.74e-45!115;UBERON:0001049!6.70e-38!57;UBERON:0005068!6.70e-38!57;UBERON:0006241!6.70e-38!57;UBERON:0007135!6.70e-38!57;UBERON:0002780!8.17e-35!41;UBERON:0001890!8.17e-35!41;UBERON:0006240!8.17e-35!41;UBERON:0002616!5.59e-34!59;UBERON:0003080!8.21e-34!42;UBERON:0001893!9.99e-34!34;UBERON:0002020!1.41e-33!34;UBERON:0003528!1.41e-33!34;UBERON:0001869!2.31e-33!32;UBERON:0001017!7.39e-32!82;UBERON:0002791!8.55e-32!33;UBERON:0005743!1.26e-31!86;UBERON:0000955!3.19e-31!69;UBERON:0006238!3.19e-31!69;UBERON:0003075!4.75e-30!86;UBERON:0007284!4.75e-30!86;UBERON:0002619!7.02e-30!22;UBERON:0002346!3.10e-28!90;UBERON:0000073!1.28e-27!94;UBERON:0001016!1.28e-27!94;UBERON:0001950!3.00e-26!20;UBERON:0000956!8.05e-26!25;UBERON:0000203!8.05e-26!25;UBERON:0003056!2.03e-24!61;UBERON:0000178!1.16e-18!15;UBERON:0000179!1.16e-18!15;UBERON:0000463!1.16e-18!15;UBERON:0000153!1.83e-17!129;UBERON:0007811!1.83e-17!129;UBERON:0000033!1.28e-16!123;UBERON:0001871!3.59e-14!7;UBERON:0004121!2.65e-13!169;UBERON:0000924!9.48e-13!173;UBERON:0006601!9.48e-13!173;UBERON:0000349!8.01e-12!5;UBERON:0000369!1.21e-10!4;UBERON:0002435!1.21e-10!4;UBERON:0000204!1.21e-10!4;UBERON:0010082!1.21e-10!4;UBERON:0000200!1.84e-10!6;UBERON:0002420!1.50e-09!9;UBERON:0007245!1.50e-09!9;UBERON:0010009!1.50e-09!9;UBERON:0010011!1.50e-09!9;UBERON:0000454!1.50e-09!9;UBERON:0002308!3.87e-09!9;UBERON:0000125!3.87e-09!9;UBERON:0005383!2.41e-08!3;UBERON:0005382!2.41e-08!3;UBERON:0002771!3.07e-08!3;UBERON:0001872!4.00e-08!5;UBERON:0000025!8.72e-08!194;UBERON:0000988!4.05e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.58e-37;15!UBERON:0000179;1.58e-37;15!UBERON:0000463;1.58e-37;15!UBERON:0001869;1.15e-28;32!UBERON:0001893;7.97e-28;34!UBERON:0002791;6.83e-25;32!UBERON:0001950;1.25e-24;20!UBERON:0002619;2.26e-22;22!UBERON:0003528;9.60e-22;34!UBERON:0002020;9.60e-22;34!UBERON:0000956;1.23e-19;25!UBERON:0000203;1.23e-19;25!UBERON:0002390;2.95e-19;32!UBERON:0000200;2.83e-18;6!UBERON:0002780;6.62e-18;41!UBERON:0001890;6.62e-18;41!UBERON:0000369;7.82e-16;4!UBERON:0002435;7.82e-16;4!UBERON:0000204;7.82e-16;4!UBERON:0002021;8.82e-13;5!UBERON:0000073;6.97e-11;53!UBERON:0002616;6.97e-11;53!UBERON:0001017;1.93e-10;75!UBERON:0001870;5.42e-10;3!UBERON:0005383;5.42e-10;3!UBERON:0005382;5.42e-10;3!UBERON:0007023;6.52e-10;114!UBERON:0002193;1.09e-09;42!UBERON:0009663;2.81e-09;7!UBERON:0000955;1.46e-08;68!UBERON:0002581;4.10e-08;1!UBERON:0002902;4.10e-08;1!UBERON:0001882;4.10e-08;1!UBERON:0001874;4.10e-08;1!UBERON:0009899;4.10e-08;1!UBERON:0007190;4.10e-08;1!UBERON:0005403;4.10e-08;1!UBERON:0002420;2.55e-07;9!UBERON:0000125;2.55e-07;9!UBERON:0007245;2.55e-07;9!UBERON:0002308;2.55e-07;9!UBERON:0010009;2.55e-07;9!UBERON:0010011;2.55e-07;9!UBERON:0000454;2.55e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.59e-37,15;UBERON:0000179,1.59e-37,15;UBERON:0000463,1.59e-37,15;UBERON:0007023,1.27e-33,114;UBERON:0001869,4.53e-32,32;UBERON:0001893,4.21e-30,34;UBERON:0002780,8.98e-29,41;UBERON:0001890,8.98e-29,41;UBERON:0003080,8.98e-29,41;UBERON:0006240,8.98e-29,41;UBERON:0002791,2.59e-27,32;UBERON:0003528,1.25e-25,34;UBERON:0002020,1.25e-25,34;UBERON:0001950,1.49e-24,20;UBERON:0002619,2.65e-22,22;UBERON:0000073,8.52e-22,53;UBERON:0002616,8.52e-22,53;UBERON:0001049,1.65e-20,56;UBERON:0005068,1.65e-20,56;UBERON:0006241,1.65e-20,56;UBERON:0007135,1.65e-20,56;UBERON:0000956,1.42e-19,25;UBERON:0000203,1.42e-19,25;UBERON:0003056,1.21e-18,61;UBERON:0000200,3.72e-18,6;UBERON:0000369,3.26e-16,4;UBERON:0002435,3.26e-16,4;UBERON:0000204,3.26e-16,4;UBERON:0010082,3.26e-16,4;UBERON:0000955,3.27e-16,68;UBERON:0006238,3.27e-16,68;UBERON:0001017,2.30e-15,81;UBERON:0001016,1.39e-13,89;UBERON:0003075,2.93e-13,82;UBERON:0007284,2.93e-13,82;UBERON:0002021,7.50e-13,5;UBERON:0002346,1.58e-12,86;UBERON:0005383,3.27e-10,3;UBERON:0005382,3.27e-10,3;UBERON:0001870,6.22e-10,3;UBERON:0010371,6.22e-10,104;UBERON:0009663,1.72e-09,7;UBERON:0001874,2.50e-08,1;UBERON:0001882,2.69e-08,1;UBERON:0005403,2.69e-08,1;UBERON:0002902,2.89e-08,1;UBERON:0009899,2.89e-08,1;UBERON:0002581,3.33e-08,1;UBERON:0007190,7.16e-08,1;UBERON:0002420,1.75e-07,9;UBERON:0000125,1.75e-07,9;UBERON:0007245,1.75e-07,9;UBERON:0002308,1.75e-07,9;UBERON:0010009,1.75e-07,9;UBERON:0010011,1.75e-07,9;UBERON:0000454,1.75e-07,9;UBERON:0010314,2.68e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.86669444906706,4.70583811844821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6861902308042,19.1159301785594,13.1018853050057,4.04994018278241,4.93634727703433,12.9694662238543,15.6609116799053,16.6556287021797,0,0,0,0,0,0,0,0,0,0,0,0.842391534340376,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,1.89318974933188,0.33307196799782,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,7.18449277040819,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.4471572635049,0,0.221158519862449,0,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0.664846727600626,0,0,0.167821586975843,0.189753732724185,0.635746315921515,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,1.1713222286267,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,1.13959432720582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.268733889946905,0,0,0.0787831823072236,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.789744236554321,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.738832686744051,0,0,0,2.65013777824443,0.387848869084652,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0.919036730290385,0.327872630709804,0,0,1.22026264901963,1.1267183763585,0,0.110929051536852,0.620964029413834,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86264752779733,0,1.11743701340006,1.23069818544453,0,1.72893131160545,0.968853873791107,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,1.01306376927592,0.781078098613847,1.03343398250592,0.760989722326882,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0.543757863814654,1.31545547125698,0,0,0,1.88538707899202,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,1.03132620757723,0,0,0,0,0,0,0,0,1.08786384305464,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0,0.23806443146374,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.86669444906706,4.70583811844821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6861902308042,19.1159301785594,13.1018853050057,4.04994018278241,4.93634727703433,12.9694662238543,15.6609116799053,16.6556287021797,0,0,0,0,0,0,0,0,0,0,0,0.842391534340376,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,1.89318974933188,0.33307196799782,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,7.18449277040819,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.4471572635049,0,0.221158519862449,0,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0.664846727600626,0,0,0.167821586975843,0.189753732724185,0.635746315921515,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,1.1713222286267,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,1.13959432720582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.268733889946905,0,0,0.0787831823072236,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.789744236554321,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.738832686744051,0,0,0,2.65013777824443,0.387848869084652,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0.919036730290385,0.327872630709804,0,0,1.22026264901963,1.1267183763585,0,0.110929051536852,0.620964029413834,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86264752779733,0,1.11743701340006,1.23069818544453,0,1.72893131160545,0.968853873791107,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,1.01306376927592,0.781078098613847,1.03343398250592,0.760989722326882,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0.543757863814654,1.31545547125698,0,0,0,1.88538707899202,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,1.03132620757723,0,0,0,0,0,0,0,0,1.08786384305464,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0,0.23806443146374,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p18@EPB49 | |short_description=p18@EPB49 | ||
}} | }} |
Latest revision as of 09:44, 17 September 2015
Short description: | p18@EPB49 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_EPB49_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -162bp_to_ENST00000520174_5end |
EntrezGene: | EPB49 |
HGNC: | 3382 |
UniProt: | E5RFK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.72e-15 | 2 |
erythroblast | 2.72e-15 | 2 |
megakaryocyte-erythroid progenitor cell | 2.72e-15 | 2 |
erythroid progenitor cell | 2.72e-15 | 2 |
reticulocyte | 2.72e-15 | 2 |
proerythroblast | 2.72e-15 | 2 |
basophilic erythroblast | 2.72e-15 | 2 |
polychromatophilic erythroblast | 2.72e-15 | 2 |
orthochromatic erythroblast | 2.72e-15 | 2 |