FFCP PHASE1:Hg19::chr2:45878234..45878309,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5581 | |EntrezGene=5581 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9401 | |HGNC=9401 | ||
|TSSclassifier=strong | |||
|UniProt=C9JR22 | |UniProt=C9JR22 | ||
|association_with_transcript=-174bp_to_ENST00000421201_5end | |association_with_transcript=-174bp_to_ENST00000421201_5end | ||
|cluster_id=chr2:45878234..45878309,+ | |||
|description=CAGE_peak_2_at_PRKCE_5end | |description=CAGE_peak_2_at_PRKCE_5end | ||
|id=chr2:45878234..45878309,+ | |id=chr2:45878234..45878309,+ | ||
|ontology_enrichment_celltype=CL:0000738!9.40e-22!140;CL:0002057!5.83e-20!42;CL:0000860!1.85e-18!45;CL:0002087!3.31e-18!119;CL:0002031!2.16e-16!124;CL:0000037!3.48e-16!172;CL:0000566!3.48e-16!172;CL:0000988!1.10e-14!182;CL:0000766!1.19e-14!76;CL:0002032!1.44e-14!165;CL:0000837!1.44e-14!165;CL:0000557!3.25e-11!71;CL:0002194!2.97e-10!63;CL:0000576!2.97e-10!63;CL:0000040!2.97e-10!63;CL:0000559!2.97e-10!63;CL:0000839!4.65e-10!70;CL:0002009!1.22e-09!65;CL:0000236!1.63e-08!14;CL:0000763!8.46e-08!112;CL:0000049!8.46e-08!112;CL:0000542!1.26e-07!53;CL:0000051!1.26e-07!53;CL:0000838!1.48e-07!52 | |ontology_enrichment_celltype=CL:0000738!9.40e-22!140;CL:0002057!5.83e-20!42;CL:0000860!1.85e-18!45;CL:0002087!3.31e-18!119;CL:0002031!2.16e-16!124;CL:0000037!3.48e-16!172;CL:0000566!3.48e-16!172;CL:0000988!1.10e-14!182;CL:0000766!1.19e-14!76;CL:0002032!1.44e-14!165;CL:0000837!1.44e-14!165;CL:0000557!3.25e-11!71;CL:0002194!2.97e-10!63;CL:0000576!2.97e-10!63;CL:0000040!2.97e-10!63;CL:0000559!2.97e-10!63;CL:0000839!4.65e-10!70;CL:0002009!1.22e-09!65;CL:0000236!1.63e-08!14;CL:0000763!8.46e-08!112;CL:0000049!8.46e-08!112;CL:0000542!1.26e-07!53;CL:0000051!1.26e-07!53;CL:0000838!1.48e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.17e-14;33!CL:0002057;2.17e-14;33!CL:0000576;5.64e-13;48!CL:0000766;2.95e-09;69!CL:0000236;9.57e-09;13!CL:0000473;1.03e-08;39!CL:0000234;1.03e-08;39!CL:0002087;3.84e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.05e-23,136;CL:0000860,1.66e-20,42;CL:0002057,1.66e-20,42;CL:0002087,1.30e-19,115;CL:0002031,4.02e-18,120;CL:0000037,4.96e-18,168;CL:0000766,9.56e-17,72;CL:0000988,1.47e-16,177;CL:0002032,1.93e-16,161;CL:0000837,1.93e-16,161;CL:0000473,8.06e-16,48;CL:0000234,8.06e-16,48;CL:0000557,4.59e-13,67;CL:0000839,6.44e-12,66;CL:0002194,7.75e-12,59;CL:0000576,7.75e-12,59;CL:0000040,7.75e-12,59;CL:0000559,7.75e-12,59;CL:0002009,3.31e-11,61;CL:0000763,1.82e-09,108;CL:0000049,1.82e-09,108;CL:0000236,1.01e-08,14;CL:0000542,1.68e-07,53;CL:0000051,1.68e-07,53;CL:0000838,1.98e-07,52;CL:0000945,8.36e-07,24;CL:0000826,8.36e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;7.39e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.36e-23!115;UBERON:0001049!1.10e-18!57;UBERON:0005068!1.10e-18!57;UBERON:0006241!1.10e-18!57;UBERON:0007135!1.10e-18!57;UBERON:0002616!7.46e-16!59;UBERON:0003080!1.71e-15!42;UBERON:0002780!2.26e-15!41;UBERON:0001890!2.26e-15!41;UBERON:0006240!2.26e-15!41;UBERON:0001893!1.34e-14!34;UBERON:0000955!2.40e-14!69;UBERON:0006238!2.40e-14!69;UBERON:0002791!5.11e-14!33;UBERON:0001869!5.21e-14!32;UBERON:0002020!9.23e-14!34;UBERON:0003528!9.23e-14!34;UBERON:0002619!1.93e-13!22;UBERON:0001017!2.11e-13!82;UBERON:0000956!1.63e-12!25;UBERON:0000203!1.63e-12!25;UBERON:0001950!2.22e-12!20;UBERON:0005743!5.61e-12!86;UBERON:0003075!5.41e-11!86;UBERON:0007284!5.41e-11!86;UBERON:0000073!6.18e-11!94;UBERON:0001016!6.18e-11!94;UBERON:0002390!1.62e-10!102;UBERON:0003061!1.62e-10!102;UBERON:0002193!2.35e-10!112;UBERON:0002346!1.50e-09!90;UBERON:0001474!2.27e-09!86;UBERON:0002371!3.30e-09!80;UBERON:0000153!2.35e-08!129;UBERON:0007811!2.35e-08!129;UBERON:0003056!4.44e-08!61;UBERON:0000033!9.55e-08!123;UBERON:0002405!2.36e-07!115;UBERON:0004765!8.41e-07!101;UBERON:0001434!8.41e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.01e-14;22!UBERON:0000956;3.85e-13;25!UBERON:0000203;3.85e-13;25!UBERON:0001869;4.91e-13;32!UBERON:0001893;6.35e-13;34!UBERON:0001950;7.52e-13;20!UBERON:0002791;8.95e-13;32!UBERON:0003528;2.70e-12;34!UBERON:0002020;2.70e-12;34!UBERON:0002780;8.02e-12;41!UBERON:0001890;8.02e-12;41!UBERON:0000073;2.36e-11;53!UBERON:0002616;2.36e-11;53!UBERON:0000955;1.24e-07;68!UBERON:0001017;4.90e-07;75 | |||
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| ||
|short_description=p2@PRKCE | |short_description=p2@PRKCE | ||
}} | }} |
Latest revision as of 10:10, 17 September 2015
Short description: | p2@PRKCE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRKCE_5end |
Coexpression cluster: | NA |
Association with transcript: | -174bp_to_ENST00000421201_5end |
EntrezGene: | PRKCE |
HGNC: | 9401 |
UniProt: | C9JR22 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.05e-23 | 136 |
classical monocyte | 1.66e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.66e-20 | 42 |
nongranular leukocyte | 1.30e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 4.02e-18 | 120 |
hematopoietic stem cell | 4.96e-18 | 168 |
myeloid leukocyte | 9.56e-17 | 72 |
hematopoietic cell | 1.47e-16 | 177 |
hematopoietic oligopotent progenitor cell | 1.93e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.93e-16 | 161 |
defensive cell | 8.06e-16 | 48 |
phagocyte | 8.06e-16 | 48 |
granulocyte monocyte progenitor cell | 4.59e-13 | 67 |
myeloid lineage restricted progenitor cell | 6.44e-12 | 66 |
monopoietic cell | 7.75e-12 | 59 |
monocyte | 7.75e-12 | 59 |
monoblast | 7.75e-12 | 59 |
promonocyte | 7.75e-12 | 59 |
macrophage dendritic cell progenitor | 3.31e-11 | 61 |
myeloid cell | 1.82e-09 | 108 |
common myeloid progenitor | 1.82e-09 | 108 |
B cell | 1.01e-08 | 14 |
lymphocyte | 1.68e-07 | 53 |
common lymphoid progenitor | 1.68e-07 | 53 |
lymphoid lineage restricted progenitor cell | 1.98e-07 | 52 |
lymphocyte of B lineage | 8.36e-07 | 24 |
pro-B cell | 8.36e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.16e-23 | 114 |
neural tube | 4.74e-19 | 56 |
neural rod | 4.74e-19 | 56 |
future spinal cord | 4.74e-19 | 56 |
neural keel | 4.74e-19 | 56 |
regional part of nervous system | 1.58e-18 | 53 |
regional part of brain | 1.58e-18 | 53 |
regional part of forebrain | 8.83e-16 | 41 |
forebrain | 8.83e-16 | 41 |
anterior neural tube | 8.83e-16 | 41 |
future forebrain | 8.83e-16 | 41 |
telencephalon | 5.50e-15 | 34 |
cerebral hemisphere | 2.23e-14 | 32 |
brain | 3.11e-14 | 68 |
future brain | 3.11e-14 | 68 |
brain grey matter | 4.03e-14 | 34 |
gray matter | 4.03e-14 | 34 |
regional part of telencephalon | 4.43e-14 | 32 |
regional part of cerebral cortex | 8.62e-14 | 22 |
central nervous system | 2.46e-13 | 81 |
cerebral cortex | 7.74e-13 | 25 |
pallium | 7.74e-13 | 25 |
neocortex | 1.06e-12 | 20 |
hematopoietic system | 4.16e-12 | 98 |
blood island | 4.16e-12 | 98 |
nervous system | 5.01e-12 | 89 |
hemolymphoid system | 7.85e-12 | 108 |
neural plate | 3.06e-11 | 82 |
presumptive neural plate | 3.06e-11 | 82 |
immune system | 3.49e-11 | 93 |
bone element | 4.45e-11 | 82 |
bone marrow | 5.80e-11 | 76 |
neurectoderm | 1.55e-09 | 86 |
skeletal element | 1.80e-08 | 90 |
pre-chordal neural plate | 7.75e-08 | 61 |
skeletal system | 4.02e-07 | 100 |