FFCP PHASE1:Hg19::chr10:17278284..17278356,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7431 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12692 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-228bp_to_BC031031_5end | |||
|cluster_id=chr10:17278284..17278356,+ | |||
|coexpression_cluster_id=C581 | |||
|description=CAGE_peak_4_at_VIM_5end | |||
|id=chr10:17278284..17278356,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.61e-26!180;CL:0000048!1.72e-19!430;CL:0002371!6.30e-19!591;CL:0000723!6.44e-18!436;CL:0000034!1.68e-16!444;CL:0000144!5.91e-16!625;CL:0000057!3.99e-15!75;CL:0002057!3.89e-14!42;CL:0000222!1.12e-12!119;CL:0000860!2.77e-12!45;CL:0002009!2.45e-11!65;CL:0002194!3.07e-11!63;CL:0000576!3.07e-11!63;CL:0000040!3.07e-11!63;CL:0000559!3.07e-11!63;CL:0000557!7.70e-11!71;CL:0000839!4.14e-10!70;CL:0002320!4.85e-10!365;CL:0000766!1.36e-09!76;CL:0000680!1.59e-09!57;CL:0000056!1.59e-09!57;CL:0000355!1.59e-09!57;CL:0000187!5.29e-09!54;CL:0000393!5.40e-09!60;CL:0000211!5.40e-09!60;CL:0000134!5.94e-09!358;CL:0000183!8.45e-09!59;CL:0002620!2.04e-08!23;CL:0000548!2.08e-08!679;CL:0000004!2.08e-08!679;CL:0000255!2.08e-08!679;CL:0000219!2.84e-08!390;CL:0000012!3.54e-08!682;CL:0000192!8.55e-08!42;CL:0000514!8.55e-08!42;CL:0000359!3.09e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.15e-16;33!CL:0002057;1.15e-16;33!CL:0000473;9.28e-15;39!CL:0000234;9.28e-15;39!CL:0002620;1.20e-08;23!CL:0000359;3.47e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.43e-21,427;CL:0000723,4.90e-20,433;CL:0000034,2.74e-18,441;CL:0000057,4.63e-16,76;CL:0000473,2.23e-15,48;CL:0000234,2.23e-15,48;CL:0000860,4.06e-14,42;CL:0002057,4.06e-14,42;CL:0000222,1.43e-12,121;CL:0002009,3.72e-12,61;CL:0002194,4.58e-12,59;CL:0000576,4.58e-12,59;CL:0000040,4.58e-12,59;CL:0000559,4.58e-12,59;CL:0000557,7.54e-12,67;CL:0000839,3.45e-11,66;CL:0002320,4.85e-11,361;CL:0000766,2.15e-10,72;CL:0000680,2.23e-10,58;CL:0000056,2.23e-10,58;CL:0000355,2.23e-10,58;CL:0000134,7.26e-10,354;CL:0000187,7.90e-10,55;CL:0000393,1.27e-09,61;CL:0000211,1.27e-09,61;CL:0000219,3.25e-09,386;CL:0002620,9.64e-09,23;CL:0000192,1.43e-08,43;CL:0000514,1.43e-08,43;CL:0000359,1.66e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002057;6.51e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!8.44e-23!167;UBERON:0003081!1.13e-18!216;UBERON:0002049!1.08e-13!79;UBERON:0007798!1.08e-13!79;UBERON:0000914!2.68e-13!83;UBERON:0002329!2.68e-13!83;UBERON:0003077!2.68e-13!83;UBERON:0003059!2.68e-13!83;UBERON:0007282!2.68e-13!83;UBERON:0009618!2.68e-13!83;UBERON:0007285!2.68e-13!83;UBERON:0000055!1.76e-12!69;UBERON:0004290!2.07e-12!70;UBERON:0004765!2.19e-12!101;UBERON:0001434!2.19e-12!101;UBERON:0002371!8.02e-12!80;UBERON:0001981!9.67e-12!60;UBERON:0007500!9.67e-12!60;UBERON:0004537!9.67e-12!60;UBERON:0006965!9.67e-12!60;UBERON:0004535!1.37e-11!110;UBERON:0001474!3.56e-11!86;UBERON:0004872!4.60e-11!84;UBERON:0001009!8.92e-11!113;UBERON:0001637!1.13e-10!42;UBERON:0003509!1.13e-10!42;UBERON:0004572!1.13e-10!42;UBERON:0000926!1.24e-10!448;UBERON:0004120!1.24e-10!448;UBERON:0006603!1.24e-10!448;UBERON:0002384!1.28e-10!375;UBERON:0001134!1.68e-09!61;UBERON:0002036!1.68e-09!61;UBERON:0003082!1.68e-09!61;UBERON:0000486!2.17e-09!82;UBERON:0002385!6.72e-09!63;UBERON:0001015!6.72e-09!63;UBERON:0000383!6.72e-09!63;UBERON:0004573!1.18e-08!33;UBERON:0004571!1.18e-08!33;UBERON:0002193!1.67e-07!112;UBERON:0000947!2.34e-07!21;UBERON:0010191!2.34e-07!21;UBERON:0002199!6.33e-07!45;UBERON:0002416!6.33e-07!45;UBERON:0002390!8.19e-07!102;UBERON:0003061!8.19e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.39e-08;42!UBERON:0003509;4.39e-08;42!UBERON:0004572;4.39e-08;42!UBERON:0004573;5.51e-08;33!UBERON:0004571;5.51e-08;33!UBERON:0000947;1.54e-07;21!UBERON:0010191;1.54e-07;21!UBERON:0007500;3.38e-07;56!UBERON:0001981;3.38e-07;56!UBERON:0004537;3.38e-07;56 | |||
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| |||
|short_description=p4@VIM | |||
}} |
Latest revision as of 10:55, 17 September 2015
Short description: | p4@VIM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_VIM_5end |
Coexpression cluster: | C581_Fibroblast_Keratocytes_Lens_CD14_Mesenchymal_Hepatic_Hair |
Association with transcript: | -228bp_to_BC031031_5end |
EntrezGene: | VIM |
HGNC: | 12692 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.43e-21 | 427 |
somatic stem cell | 4.90e-20 | 433 |
stem cell | 2.74e-18 | 441 |
fibroblast | 4.63e-16 | 76 |
defensive cell | 2.23e-15 | 48 |
phagocyte | 2.23e-15 | 48 |
classical monocyte | 4.06e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.06e-14 | 42 |
mesodermal cell | 1.43e-12 | 121 |
macrophage dendritic cell progenitor | 3.72e-12 | 61 |
monopoietic cell | 4.58e-12 | 59 |
monocyte | 4.58e-12 | 59 |
monoblast | 4.58e-12 | 59 |
promonocyte | 4.58e-12 | 59 |
granulocyte monocyte progenitor cell | 7.54e-12 | 67 |
myeloid lineage restricted progenitor cell | 3.45e-11 | 66 |
connective tissue cell | 4.85e-11 | 361 |
myeloid leukocyte | 2.15e-10 | 72 |
muscle precursor cell | 2.23e-10 | 58 |
myoblast | 2.23e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.23e-10 | 58 |
mesenchymal cell | 7.26e-10 | 354 |
muscle cell | 7.90e-10 | 55 |
electrically responsive cell | 1.27e-09 | 61 |
electrically active cell | 1.27e-09 | 61 |
motile cell | 3.25e-09 | 386 |
skin fibroblast | 9.64e-09 | 23 |
smooth muscle cell | 1.43e-08 | 43 |
smooth muscle myoblast | 1.43e-08 | 43 |
vascular associated smooth muscle cell | 1.66e-07 | 32 |