FFCP PHASE1:Hg19::chr2:50574926..50574990,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9378 | |EntrezGene=9378 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8008 | |HGNC=8008 | ||
|TSSclassifier=strong | |||
|UniProt=A4FVB9,A7E294,P58400,Q9ULB1 | |UniProt=A4FVB9,A7E294,P58400,Q9ULB1 | ||
|association_with_transcript=-32bp_to_NM_138735,uc010fbp.2_5end | |association_with_transcript=-32bp_to_NM_138735,uc010fbp.2_5end | ||
|cluster_id=chr2:50574926..50574990,- | |||
|coexpression_cluster_id=C1910 | |coexpression_cluster_id=C1910 | ||
|description=CAGE_peak_2_at_NRXN1_5end | |description=CAGE_peak_2_at_NRXN1_5end | ||
|id=chr2:50574926..50574990,- | |id=chr2:50574926..50574990,- | ||
|ontology_enrichment_celltype=CL:0000047!1.99e-12!8;CL:0000540!7.59e-10!6;CL:0000031!7.59e-10!6;CL:0000404!7.59e-10!6 | |ontology_enrichment_celltype=CL:0000047!1.99e-12!8;CL:0000540!7.59e-10!6;CL:0000031!7.59e-10!6;CL:0000404!7.59e-10!6 | ||
|ontology_enrichment_celltype_v019=CL:0000540;8.10e-08;6!CL:0000404;8.10e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.23e-09,8;CL:0000540,9.56e-08,6;CL:0000031,9.56e-08,6;CL:0000404,9.56e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.05e-12;82!UBERON:0006215;1.12e-08;3!CL:0000031;8.10e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;2.28e-60;22!UBERON:0001950;4.86e-55;20!UBERON:0000956;1.18e-52;25!UBERON:0000203;1.18e-52;25!UBERON:0001869;4.70e-46;32!UBERON:0001893;9.83e-46;34!UBERON:0003528;4.85e-45;34!UBERON:0002020;4.85e-45;34!UBERON:0002791;1.33e-42;32!UBERON:0002780;4.53e-39;41!UBERON:0001890;4.53e-39;41!UBERON:0000073;2.22e-36;53!UBERON:0002616;2.22e-36;53!UBERON:0000955;5.89e-26;68!UBERON:0001017;3.02e-24;75!UBERON:0001016;5.36e-21;83!UBERON:0000200;3.76e-18;6!UBERON:0002021;4.34e-16;5!UBERON:0001871;1.08e-15;6!UBERON:0001872;1.78e-15;5!UBERON:0000349;5.94e-15;5!UBERON:0007023;4.22e-12;114!UBERON:0004732;6.77e-12;13!UBERON:0001870;4.06e-10;3!UBERON:0002680;4.09e-10;9!UBERON:0001895;4.09e-10;9!UBERON:0004733;4.97e-10;12!UBERON:0002028;4.97e-10;12!UBERON:0011216;5.16e-09;132!UBERON:0000988;1.72e-08;3!UBERON:0001905;1.50e-07;2!UBERON:0002757;1.50e-07;2!UBERON:0010134;1.50e-07;2!UBERON:0005408;1.50e-07;2!UBERON:0001899;1.50e-07;2!UBERON:0002784;1.95e-07;4!UBERON:0002298;2.71e-07;6!UBERON:0002702;3.14e-07;2!UBERON:0002771;3.60e-07;2!UBERON:0001876;3.82e-07;2!UBERON:0001894;5.45e-07;7!UBERON:0001954;6.93e-07;2!UBERON:0003022;6.93e-07;2!UBERON:0002421;6.93e-07;2!UBERON:0002600;6.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.30e-71,81;UBERON:0001049,1.06e-69,56;UBERON:0005068,1.06e-69,56;UBERON:0006241,1.06e-69,56;UBERON:0007135,1.06e-69,56;UBERON:0000073,2.50e-66,53;UBERON:0002616,2.50e-66,53;UBERON:0001016,5.27e-66,89;UBERON:0002619,2.20e-60,22;UBERON:0000955,1.42e-58,68;UBERON:0006238,1.42e-58,68;UBERON:0002780,5.91e-58,41;UBERON:0001890,5.91e-58,41;UBERON:0003080,5.91e-58,41;UBERON:0006240,5.91e-58,41;UBERON:0001950,4.76e-55,20;UBERON:0001893,1.01e-52,34;UBERON:0000956,1.15e-52,25;UBERON:0000203,1.15e-52,25;UBERON:0003528,1.99e-52,34;UBERON:0002020,1.99e-52,34;UBERON:0001869,3.21e-52,32;UBERON:0002791,7.01e-48,32;UBERON:0003075,5.44e-47,82;UBERON:0007284,5.44e-47,82;UBERON:0002346,2.50e-44,86;UBERON:0003056,4.79e-39,61;UBERON:0010371,8.35e-37,104;UBERON:0007023,8.83e-35,114;UBERON:0004121,7.61e-32,171;UBERON:0000924,7.61e-32,171;UBERON:0006601,7.61e-32,171;UBERON:0010314,4.25e-30,132;UBERON:0011216,2.46e-25,223;UBERON:0000200,3.71e-18,6;UBERON:0000025,3.20e-17,192;UBERON:0002021,4.15e-16,5;UBERON:0001871,1.03e-15,6;UBERON:0001872,1.86e-15,5;UBERON:0000349,5.70e-15,5;UBERON:0003076,5.21e-13,15;UBERON:0003057,5.21e-13,15;UBERON:0004111,1.83e-12,240;UBERON:0004732,6.83e-12,13;UBERON:0001870,4.13e-10,3;UBERON:0002680,4.35e-10,9;UBERON:0001895,4.35e-10,9;UBERON:0010092,4.35e-10,9;UBERON:0004733,5.33e-10,12;UBERON:0002028,5.33e-10,12;UBERON:0007277,5.33e-10,12;UBERON:0000483,2.22e-09,306;UBERON:0000119,3.49e-09,309;UBERON:0000988,1.92e-08,3;UBERON:0001905,1.55e-07,2;UBERON:0002757,1.55e-07,2;UBERON:0010134,1.55e-07,2;UBERON:0005408,1.55e-07,2;UBERON:0001899,1.55e-07,2;UBERON:0002784,1.68e-07,4;UBERON:0002298,2.96e-07,6;UBERON:0002702,3.14e-07,2;UBERON:0002771,3.55e-07,2;UBERON:0001876,3.77e-07,2;UBERON:0001894,5.00e-07,7;UBERON:0006222,5.00e-07,7;UBERON:0001954,6.84e-07,2;UBERON:0003022,6.84e-07,2;UBERON:0002421,6.84e-07,2;UBERON:0002600,6.84e-07,2;UBERON:0002050,7.61e-07,564 | |||
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|short_description=p2@NRXN1 | |short_description=p2@NRXN1 | ||
}} | }} |
Latest revision as of 13:32, 17 September 2015
Short description: | p2@NRXN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NRXN1_5end |
Coexpression cluster: | C1910_anaplastic_pineal_temporal_occipital_duodenum_brain_parietal |
Association with transcript: | -32bp_to_NM_138735, uc010fbp.2_5end |
EntrezGene: | NRXN1 |
HGNC: | 8008 |
UniProt: | A4FVB9A7E294P58400Q9ULB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.23e-09 | 8 |
neuron | 9.56e-08 | 6 |
neuroblast | 9.56e-08 | 6 |
electrically signaling cell | 9.56e-08 | 6 |