FFCP PHASE1:Hg19::chr1:155959853..155959881,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9181 | |EntrezGene=9181 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=682 | |HGNC=682 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000368316,uc001fmu.2_5end | |association_with_transcript=0bp_to_ENST00000368316,uc001fmu.2_5end | ||
|cluster_id=chr1:155959853..155959881,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_11_at_ARHGEF2_5end | |description=CAGE_peak_11_at_ARHGEF2_5end | ||
|id=chr1:155959853..155959881,- | |id=chr1:155959853..155959881,- | ||
|ontology_enrichment_celltype=CL:0000766!3.72e-74!76;CL:0000763!1.36e-67!112;CL:0000049!1.36e-67!112;CL:0000557!9.60e-65!71;CL:0002009!5.57e-64!65;CL:0002194!1.21e-61!63;CL:0000576!1.21e-61!63;CL:0000040!1.21e-61!63;CL:0000559!1.21e-61!63;CL:0000839!3.31e-61!70;CL:0000738!2.74e-60!140;CL:0002057!8.14e-57!42;CL:0000037!8.83e-57!172;CL:0000566!8.83e-57!172;CL:0002032!1.05e-52!165;CL:0000837!1.05e-52!165;CL:0000860!6.61e-52!45;CL:0000988!6.69e-52!182;CL:0002087!1.09e-42!119;CL:0002031!3.66e-42!124;CL:0000134!8.31e-13!358;CL:0002393!1.42e-12!9;CL:0002397!1.42e-12!9;CL:0000451!2.10e-12!10;CL:0002320!4.78e-12!365;CL:0000094!2.91e-11!8;CL:0000990!1.62e-10!8;CL:0000219!1.96e-09!390;CL:0000840!6.37e-08!5;CL:0001029!6.37e-08!5;CL:0000081!1.22e-07!11;CL:0000048!3.38e-07!430;CL:0000723!8.94e-07!436 | |ontology_enrichment_celltype=CL:0000766!3.72e-74!76;CL:0000763!1.36e-67!112;CL:0000049!1.36e-67!112;CL:0000557!9.60e-65!71;CL:0002009!5.57e-64!65;CL:0002194!1.21e-61!63;CL:0000576!1.21e-61!63;CL:0000040!1.21e-61!63;CL:0000559!1.21e-61!63;CL:0000839!3.31e-61!70;CL:0000738!2.74e-60!140;CL:0002057!8.14e-57!42;CL:0000037!8.83e-57!172;CL:0000566!8.83e-57!172;CL:0002032!1.05e-52!165;CL:0000837!1.05e-52!165;CL:0000860!6.61e-52!45;CL:0000988!6.69e-52!182;CL:0002087!1.09e-42!119;CL:0002031!3.66e-42!124;CL:0000134!8.31e-13!358;CL:0002393!1.42e-12!9;CL:0002397!1.42e-12!9;CL:0000451!2.10e-12!10;CL:0002320!4.78e-12!365;CL:0000094!2.91e-11!8;CL:0000990!1.62e-10!8;CL:0000219!1.96e-09!390;CL:0000840!6.37e-08!5;CL:0001029!6.37e-08!5;CL:0000081!1.22e-07!11;CL:0000048!3.38e-07!430;CL:0000723!8.94e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.68e-76;33!CL:0002057;8.68e-76;33!CL:0000473;9.09e-76;39!CL:0000234;9.09e-76;39!CL:0000576;3.35e-59;48!CL:0000766;1.21e-49;69!CL:0000763;4.79e-24;100!CL:0000094;1.65e-19;8!CL:0000738;2.03e-16;136!CL:0000235;2.34e-16;6!CL:0002393;6.92e-16;6!CL:0002397;6.92e-16;6!CL:0002087;1.85e-14;104!CL:0000081;8.62e-14;11!CL:0000840;4.96e-10;5!CL:0000988;8.59e-10;177!CL:0000775;2.67e-08;3!CL:0000767;3.54e-08;3!CL:0000226;3.82e-08;3!CL:0000842;3.82e-08;3!CL:0000875;5.78e-08;3!CL:0002396;5.78e-08;3!CL:0000219;2.26e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.66e-121,48;CL:0000234,4.66e-121,48;CL:0000766,1.47e-120,72;CL:0002009,3.21e-115,61;CL:0002194,7.80e-111,59;CL:0000576,7.80e-111,59;CL:0000040,7.80e-111,59;CL:0000559,7.80e-111,59;CL:0000860,2.53e-105,42;CL:0002057,2.53e-105,42;CL:0000557,8.94e-104,67;CL:0000839,8.98e-98,66;CL:0000763,6.64e-84,108;CL:0000049,6.64e-84,108;CL:0000738,2.00e-68,136;CL:0002087,2.25e-57,115;CL:0000037,2.69e-54,168;CL:0002031,5.42e-52,120;CL:0002032,2.55e-51,161;CL:0000837,2.55e-51,161;CL:0000988,9.68e-51,177;CL:0002393,4.10e-22,9;CL:0002397,4.10e-22,9;CL:0000094,1.16e-19,8;CL:0000134,1.80e-17,354;CL:0002320,7.92e-17,361;CL:0000235,2.71e-16,6;CL:0000219,1.46e-14,386;CL:0000081,6.71e-14,11;CL:0000048,1.83e-12,427;CL:0000034,3.27e-12,441;CL:0000723,4.52e-12,433;CL:0000840,6.02e-10,5;CL:0001029,6.02e-10,5;CL:0000775,2.09e-08,3;CL:0000767,3.32e-08,3;CL:0000226,3.49e-08,3;CL:0000842,3.49e-08,3;CL:0000875,5.93e-08,3;CL:0002396,5.93e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.77e-75;42!CL:0000049;3.15e-23;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.78e-63!102;UBERON:0003061!3.78e-63!102;UBERON:0002193!7.15e-59!112;UBERON:0002371!5.60e-55!80;UBERON:0001474!1.30e-49!86;UBERON:0002405!5.84e-43!115;UBERON:0004765!5.09e-39!101;UBERON:0001434!5.09e-39!101;UBERON:0003081!2.81e-21!216;UBERON:0002204!3.77e-17!167;UBERON:0002384!1.57e-11!375;UBERON:0007023!7.59e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!3.78e-63!102;UBERON:0003061!3.78e-63!102;UBERON:0002193!7.15e-59!112;UBERON:0002371!5.60e-55!80;UBERON:0001474!1.30e-49!86;UBERON:0002405!5.84e-43!115;UBERON:0004765!5.09e-39!101;UBERON:0001434!5.09e-39!101;UBERON:0003081!2.81e-21!216;UBERON:0002204!3.77e-17!167;UBERON:0002384!1.57e-11!375;UBERON:0007023!7.59e-07!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.94e-90,76;UBERON:0002390,1.82e-87,98;UBERON:0003061,1.82e-87,98;UBERON:0002193,1.26e-83,108;UBERON:0002405,3.47e-83,93;UBERON:0001474,2.10e-82,82;UBERON:0004765,6.90e-74,90;UBERON:0001434,3.84e-65,100;UBERON:0003081,2.45e-37,203;UBERON:0002204,6.37e-35,167;UBERON:0000926,1.34e-18,315;UBERON:0004120,1.34e-18,315;UBERON:0006603,1.34e-18,315;UBERON:0002384,5.98e-16,371 | |||
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|short_description=p11@ARHGEF2 | |short_description=p11@ARHGEF2 | ||
}} | }} |
Latest revision as of 14:15, 17 September 2015
Short description: | p11@ARHGEF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ARHGEF2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000368316, uc001fmu.2_5end |
EntrezGene: | ARHGEF2 |
HGNC: | 682 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.94e-90 | 76 |
hematopoietic system | 1.82e-87 | 98 |
blood island | 1.82e-87 | 98 |
hemolymphoid system | 1.26e-83 | 108 |
immune system | 3.47e-83 | 93 |
bone element | 2.10e-82 | 82 |
skeletal element | 6.90e-74 | 90 |
skeletal system | 3.84e-65 | 100 |
lateral plate mesoderm | 2.45e-37 | 203 |
musculoskeletal system | 6.37e-35 | 167 |
mesoderm | 1.34e-18 | 315 |
mesoderm-derived structure | 1.34e-18 | 315 |
presumptive mesoderm | 1.34e-18 | 315 |
connective tissue | 5.98e-16 | 371 |