FFCP PHASE1:Hg19::chr8:24241955..24241966,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27299 | |EntrezGene=27299 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16299 | |HGNC=16299 | ||
|TSSclassifier=strong | |||
|UniProt=B7ZAK5 | |UniProt=B7ZAK5 | ||
|association_with_transcript=-16bp_to_ENST00000522298_5end | |association_with_transcript=-16bp_to_ENST00000522298_5end | ||
|cluster_id=chr8:24241955..24241966,+ | |||
|coexpression_cluster_id=C67 | |coexpression_cluster_id=C67 | ||
|description=CAGE_peak_3_at_ADAMDEC1_5end | |description=CAGE_peak_3_at_ADAMDEC1_5end | ||
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|ontology_enrichment_celltype=CL:0002194!1.19e-64!63;CL:0000576!1.19e-64!63;CL:0000040!1.19e-64!63;CL:0000559!1.19e-64!63;CL:0002009!3.25e-62!65;CL:0000766!2.54e-58!76;CL:0000839!9.90e-57!70;CL:0002057!3.80e-56!42;CL:0000557!1.00e-55!71;CL:0000860!1.34e-51!45;CL:0000763!8.57e-43!112;CL:0000049!8.57e-43!112;CL:0002087!3.31e-30!119;CL:0000738!2.22e-28!140;CL:0002031!5.12e-27!124;CL:0002032!6.36e-25!165;CL:0000837!6.36e-25!165;CL:0000037!2.34e-24!172;CL:0000566!2.34e-24!172;CL:0000988!2.98e-24!182;CL:0002619!6.70e-08!3;CL:0000235!7.68e-08!10;CL:0000134!6.79e-07!358 | |ontology_enrichment_celltype=CL:0002194!1.19e-64!63;CL:0000576!1.19e-64!63;CL:0000040!1.19e-64!63;CL:0000559!1.19e-64!63;CL:0002009!3.25e-62!65;CL:0000766!2.54e-58!76;CL:0000839!9.90e-57!70;CL:0002057!3.80e-56!42;CL:0000557!1.00e-55!71;CL:0000860!1.34e-51!45;CL:0000763!8.57e-43!112;CL:0000049!8.57e-43!112;CL:0002087!3.31e-30!119;CL:0000738!2.22e-28!140;CL:0002031!5.12e-27!124;CL:0002032!6.36e-25!165;CL:0000837!6.36e-25!165;CL:0000037!2.34e-24!172;CL:0000566!2.34e-24!172;CL:0000988!2.98e-24!182;CL:0002619!6.70e-08!3;CL:0000235!7.68e-08!10;CL:0000134!6.79e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000473;6.28e-68;39!CL:0000234;6.28e-68;39!CL:0000860;8.16e-58;33!CL:0002057;8.16e-58;33!CL:0000576;4.43e-37;48!CL:0000766;1.29e-28;69!CL:0000235;6.04e-26;6!CL:0002619;3.34e-14;3!CL:0000763;2.84e-13;100!CL:0002087;8.33e-10;104!CL:0000738;4.64e-07;136 | |ontology_enrichment_celltype_v019=CL:0000473;6.28e-68;39!CL:0000234;6.28e-68;39!CL:0000860;8.16e-58;33!CL:0002057;8.16e-58;33!CL:0000576;4.43e-37;48!CL:0000766;1.29e-28;69!CL:0000235;6.04e-26;6!CL:0002619;3.34e-14;3!CL:0000763;2.84e-13;100!CL:0002087;8.33e-10;104!CL:0000738;4.64e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.63e-74,48;CL:0000234,4.63e-74,48;CL:0002194,3.14e-71,59;CL:0000576,3.14e-71,59;CL:0000040,3.14e-71,59;CL:0000559,3.14e-71,59;CL:0002009,1.13e-68,61;CL:0000839,5.97e-63,66;CL:0000557,6.60e-62,67;CL:0000766,1.18e-60,72;CL:0000860,3.18e-53,42;CL:0002057,3.18e-53,42;CL:0000763,6.41e-38,108;CL:0000049,6.41e-38,108;CL:0002087,5.74e-33,115;CL:0002031,2.83e-31,120;CL:0000738,1.69e-28,136;CL:0000235,5.92e-26,6;CL:0002032,7.67e-23,161;CL:0000837,7.67e-23,161;CL:0000037,1.47e-21,168;CL:0000988,4.66e-20,177;CL:0002619,3.34e-14,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.78e-41;42!CL:0000049;2.75e-11;108 | |ontology_enrichment_development_v019=CL:0002057;3.78e-41;42!CL:0000049;2.75e-11;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.27e-49!102;UBERON:0003061!4.27e-49!102;UBERON:0002371!8.26e-48!80;UBERON:0002193!4.10e-47!112;UBERON:0001474!1.89e-43!86;UBERON:0002405!4.08e-40!115;UBERON:0004765!7.96e-35!101;UBERON:0001434!7.96e-35!101;UBERON:0002204!2.72e-19!167;UBERON:0003081!7.35e-19!216;UBERON:0000926!1.97e-09!448;UBERON:0004120!1.97e-09!448;UBERON:0006603!1.97e-09!448;UBERON:0000059!2.48e-08!11;UBERON:0001155!1.37e-07!9;UBERON:0000062!2.43e-07!511;UBERON:0005409!9.44e-07!35 | |ontology_enrichment_uberon=UBERON:0002390!4.27e-49!102;UBERON:0003061!4.27e-49!102;UBERON:0002371!8.26e-48!80;UBERON:0002193!4.10e-47!112;UBERON:0001474!1.89e-43!86;UBERON:0002405!4.08e-40!115;UBERON:0004765!7.96e-35!101;UBERON:0001434!7.96e-35!101;UBERON:0002204!2.72e-19!167;UBERON:0003081!7.35e-19!216;UBERON:0000926!1.97e-09!448;UBERON:0004120!1.97e-09!448;UBERON:0006603!1.97e-09!448;UBERON:0000059!2.48e-08!11;UBERON:0001155!1.37e-07!9;UBERON:0000062!2.43e-07!511;UBERON:0005409!9.44e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;7.97e-14;17!UBERON:0005409;3.95e-13;22!UBERON:0004921;1.95e-09;33!UBERON:0000059;2.30e-09;11!UBERON:0002108;2.51e-08;4!UBERON:0001155;1.48e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0000160;7.97e-14;17!UBERON:0005409;3.95e-13;22!UBERON:0004921;1.95e-09;33!UBERON:0000059;2.30e-09;11!UBERON:0002108;2.51e-08;4!UBERON:0001155;1.48e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,4.61e-54,93;UBERON:0002371,9.86e-54,76;UBERON:0001474,2.87e-49,82;UBERON:0002193,1.93e-45,108;UBERON:0002390,3.15e-45,98;UBERON:0003061,3.15e-45,98;UBERON:0004765,3.13e-44,90;UBERON:0001434,4.68e-39,100;UBERON:0002204,7.51e-22,167;UBERON:0003081,5.99e-19,203;UBERON:0005409,5.71e-14,25;UBERON:0000160,8.18e-14,17;UBERON:0000926,4.10e-10,315;UBERON:0004120,4.10e-10,315;UBERON:0006603,4.10e-10,315;UBERON:0000059,2.34e-09,11;UBERON:0002108,2.54e-08,4;UBERON:0001155,1.51e-07,9;UBERON:0000923,4.35e-07,560;UBERON:0010316,4.35e-07,560;UBERON:0005291,4.35e-07,560;UBERON:0006598,4.35e-07,560;UBERON:0010317,4.35e-07,560;UBERON:0002532,4.35e-07,560;UBERON:0002050,5.76e-07,564 | |||
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|short_description=p3@ADAMDEC1 | |short_description=p3@ADAMDEC1 | ||
}} | }} |
Latest revision as of 15:13, 17 September 2015
Short description: | p3@ADAMDEC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ADAMDEC1_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | -16bp_to_ENST00000522298_5end |
EntrezGene: | ADAMDEC1 |
HGNC: | 16299 |
UniProt: | B7ZAK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.63e-74 | 48 |
phagocyte | 4.63e-74 | 48 |
monopoietic cell | 3.14e-71 | 59 |
monocyte | 3.14e-71 | 59 |
monoblast | 3.14e-71 | 59 |
promonocyte | 3.14e-71 | 59 |
macrophage dendritic cell progenitor | 1.13e-68 | 61 |
myeloid lineage restricted progenitor cell | 5.97e-63 | 66 |
granulocyte monocyte progenitor cell | 6.60e-62 | 67 |
myeloid leukocyte | 1.18e-60 | 72 |
classical monocyte | 3.18e-53 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.18e-53 | 42 |
myeloid cell | 6.41e-38 | 108 |
common myeloid progenitor | 6.41e-38 | 108 |
nongranular leukocyte | 5.74e-33 | 115 |
hematopoietic lineage restricted progenitor cell | 2.83e-31 | 120 |
leukocyte | 1.69e-28 | 136 |
macrophage | 5.92e-26 | 6 |
hematopoietic oligopotent progenitor cell | 7.67e-23 | 161 |
hematopoietic multipotent progenitor cell | 7.67e-23 | 161 |
hematopoietic stem cell | 1.47e-21 | 168 |
hematopoietic cell | 4.66e-20 | 177 |
adult endothelial progenitor cell | 3.34e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
immune system | 4.61e-54 | 93 |
bone marrow | 9.86e-54 | 76 |
bone element | 2.87e-49 | 82 |
hemolymphoid system | 1.93e-45 | 108 |
hematopoietic system | 3.15e-45 | 98 |
blood island | 3.15e-45 | 98 |
skeletal element | 3.13e-44 | 90 |
skeletal system | 4.68e-39 | 100 |
musculoskeletal system | 7.51e-22 | 167 |
lateral plate mesoderm | 5.99e-19 | 203 |
gastrointestinal system | 5.71e-14 | 25 |
intestine | 8.18e-14 | 17 |
mesoderm | 4.10e-10 | 315 |
mesoderm-derived structure | 4.10e-10 | 315 |
presumptive mesoderm | 4.10e-10 | 315 |
large intestine | 2.34e-09 | 11 |
small intestine | 2.54e-08 | 4 |
colon | 1.51e-07 | 9 |
germ layer | 4.35e-07 | 560 |
germ layer / neural crest | 4.35e-07 | 560 |
embryonic tissue | 4.35e-07 | 560 |
presumptive structure | 4.35e-07 | 560 |
germ layer / neural crest derived structure | 4.35e-07 | 560 |
epiblast (generic) | 4.35e-07 | 560 |
embryonic structure | 5.76e-07 | 564 |