FFCP PHASE1:Hg19::chr4:38665703..38665713,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51274 | |EntrezGene=51274 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16516 | |HGNC=16516 | ||
|TSSclassifier=strong | |||
|UniProt=P57682 | |UniProt=P57682 | ||
|association_with_transcript=-76bp_to_NM_016531,uc003gtg.2,uc003gth.3_5end | |association_with_transcript=-76bp_to_NM_016531,uc003gtg.2,uc003gth.3_5end | ||
|cluster_id=chr4:38665703..38665713,+ | |||
|coexpression_cluster_id=C175 | |coexpression_cluster_id=C175 | ||
|description=CAGE_peak_5_at_KLF3_5end | |description=CAGE_peak_5_at_KLF3_5end | ||
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|ontology_enrichment_celltype=CL:0000738!4.42e-15!140;CL:0000037!1.43e-13!172;CL:0000566!1.43e-13!172;CL:0000766!7.05e-13!76;CL:0000988!7.08e-12!182;CL:0002057!1.17e-11!42;CL:0002032!2.07e-11!165;CL:0000837!2.07e-11!165;CL:0002031!2.57e-11!124;CL:0002087!4.73e-11!119;CL:0000860!4.95e-10!45;CL:0000839!9.59e-10!70;CL:0000763!8.65e-09!112;CL:0000049!8.65e-09!112;CL:0000557!1.97e-08!71;CL:0000791!2.32e-08!18;CL:0000789!2.32e-08!18;CL:0002420!2.32e-08!18;CL:0002419!2.32e-08!18;CL:0000790!2.32e-08!18;CL:0002194!6.79e-08!63;CL:0000576!6.79e-08!63;CL:0000040!6.79e-08!63;CL:0000559!6.79e-08!63;CL:0002009!5.97e-07!65;CL:0000094!7.91e-07!8 | |ontology_enrichment_celltype=CL:0000738!4.42e-15!140;CL:0000037!1.43e-13!172;CL:0000566!1.43e-13!172;CL:0000766!7.05e-13!76;CL:0000988!7.08e-12!182;CL:0002057!1.17e-11!42;CL:0002032!2.07e-11!165;CL:0000837!2.07e-11!165;CL:0002031!2.57e-11!124;CL:0002087!4.73e-11!119;CL:0000860!4.95e-10!45;CL:0000839!9.59e-10!70;CL:0000763!8.65e-09!112;CL:0000049!8.65e-09!112;CL:0000557!1.97e-08!71;CL:0000791!2.32e-08!18;CL:0000789!2.32e-08!18;CL:0002420!2.32e-08!18;CL:0002419!2.32e-08!18;CL:0000790!2.32e-08!18;CL:0002194!6.79e-08!63;CL:0000576!6.79e-08!63;CL:0000040!6.79e-08!63;CL:0000559!6.79e-08!63;CL:0002009!5.97e-07!65;CL:0000094!7.91e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.94e-10;18!CL:0000789;4.94e-10;18!CL:0002419;4.94e-10;18!CL:0000860;9.72e-10;33!CL:0002057;9.72e-10;33!CL:0000473;3.22e-09;39!CL:0000234;3.22e-09;39!CL:0000576;1.12e-08;48!CL:0000766;1.24e-08;69!CL:0000094;5.70e-08;8!CL:0000625;8.08e-07;11 | |ontology_enrichment_celltype_v019=CL:0000791;4.94e-10;18!CL:0000789;4.94e-10;18!CL:0002419;4.94e-10;18!CL:0000860;9.72e-10;33!CL:0002057;9.72e-10;33!CL:0000473;3.22e-09;39!CL:0000234;3.22e-09;39!CL:0000576;1.12e-08;48!CL:0000766;1.24e-08;69!CL:0000094;5.70e-08;8!CL:0000625;8.08e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.44e-21,136;CL:0000037,3.05e-18,168;CL:0002031,1.78e-16,120;CL:0002087,2.12e-16,115;CL:0000988,2.86e-16,177;CL:0000766,4.24e-16,72;CL:0002032,1.81e-15,161;CL:0000837,1.81e-15,161;CL:0000473,6.77e-14,48;CL:0000234,6.77e-14,48;CL:0000860,1.69e-13,42;CL:0002057,1.69e-13,42;CL:0000839,3.57e-12,66;CL:0000557,6.35e-11,67;CL:0002194,2.99e-10,59;CL:0000576,2.99e-10,59;CL:0000040,2.99e-10,59;CL:0000559,2.99e-10,59;CL:0000791,3.16e-10,18;CL:0000789,3.16e-10,18;CL:0002420,3.16e-10,18;CL:0002419,3.16e-10,18;CL:0000790,3.16e-10,18;CL:0000763,3.48e-10,108;CL:0000049,3.48e-10,108;CL:0002009,2.12e-09,61;CL:0000094,7.03e-08,8;CL:0000625,4.90e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.82e-10;42!CL:0000790;4.94e-10;18 | |ontology_enrichment_development_v019=CL:0002057;1.82e-10;42!CL:0000790;4.94e-10;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.46e-14!115;UBERON:0002390!2.32e-10!102;UBERON:0003061!2.32e-10!102;UBERON:0002193!3.83e-09!112;UBERON:0002371!7.47e-07!80 | |ontology_enrichment_uberon=UBERON:0007023!2.46e-14!115;UBERON:0002390!2.32e-10!102;UBERON:0003061!2.32e-10!102;UBERON:0002193!3.83e-09!112;UBERON:0002371!7.47e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.54e-07;15!UBERON:0000179;5.54e-07;15!UBERON:0000463;5.54e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;5.54e-07;15!UBERON:0000179;5.54e-07;15!UBERON:0000463;5.54e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.42e-15,114;UBERON:0002390,8.80e-15,98;UBERON:0003061,8.80e-15,98;UBERON:0002193,8.24e-13,108;UBERON:0002371,4.31e-09,76;UBERON:0002405,1.95e-08,93;UBERON:0001474,1.28e-07,82;UBERON:0000178,5.81e-07,15;UBERON:0000179,5.81e-07,15;UBERON:0000463,5.81e-07,15 | |||
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| ||
|short_description=p5@KLF3 | |short_description=p5@KLF3 | ||
}} | }} |
Latest revision as of 15:59, 17 September 2015
Short description: | p5@KLF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KLF3_5end |
Coexpression cluster: | C175_Eosinophils_Neutrophils_CD4_Basophils_CD19_CD8_Natural |
Association with transcript: | -76bp_to_NM_016531, uc003gtg.2, uc003gth.3_5end |
EntrezGene: | KLF3 |
HGNC: | 16516 |
UniProt: | P57682 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.44e-21 | 136 |
hematopoietic stem cell | 3.05e-18 | 168 |
hematopoietic lineage restricted progenitor cell | 1.78e-16 | 120 |
nongranular leukocyte | 2.12e-16 | 115 |
hematopoietic cell | 2.86e-16 | 177 |
myeloid leukocyte | 4.24e-16 | 72 |
hematopoietic oligopotent progenitor cell | 1.81e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.81e-15 | 161 |
defensive cell | 6.77e-14 | 48 |
phagocyte | 6.77e-14 | 48 |
classical monocyte | 1.69e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.69e-13 | 42 |
myeloid lineage restricted progenitor cell | 3.57e-12 | 66 |
granulocyte monocyte progenitor cell | 6.35e-11 | 67 |
monopoietic cell | 2.99e-10 | 59 |
monocyte | 2.99e-10 | 59 |
monoblast | 2.99e-10 | 59 |
promonocyte | 2.99e-10 | 59 |
mature alpha-beta T cell | 3.16e-10 | 18 |
alpha-beta T cell | 3.16e-10 | 18 |
immature T cell | 3.16e-10 | 18 |
mature T cell | 3.16e-10 | 18 |
immature alpha-beta T cell | 3.16e-10 | 18 |
myeloid cell | 3.48e-10 | 108 |
common myeloid progenitor | 3.48e-10 | 108 |
macrophage dendritic cell progenitor | 2.12e-09 | 61 |
granulocyte | 7.03e-08 | 8 |
CD8-positive, alpha-beta T cell | 4.90e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.42e-15 | 114 |
hematopoietic system | 8.80e-15 | 98 |
blood island | 8.80e-15 | 98 |
hemolymphoid system | 8.24e-13 | 108 |
bone marrow | 4.31e-09 | 76 |
immune system | 1.95e-08 | 93 |
bone element | 1.28e-07 | 82 |
blood | 5.81e-07 | 15 |
haemolymphatic fluid | 5.81e-07 | 15 |
organism substance | 5.81e-07 | 15 |