FFCP PHASE1:Hg19::chr12:16759380..16759391,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55885 | |EntrezGene=55885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6643 | |HGNC=6643 | ||
|TSSclassifier=strong | |||
|UniProt=Q05D86 | |UniProt=Q05D86 | ||
|association_with_transcript=-6bp_to_ENST00000453727_5end | |association_with_transcript=-6bp_to_ENST00000453727_5end | ||
|cluster_id=chr12:16759380..16759391,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_11_at_LMO3_5end | |description=CAGE_peak_11_at_LMO3_5end | ||
|id=chr12:16759380..16759391,- | |id=chr12:16759380..16759391,- | ||
|ontology_enrichment_celltype=CL:0000136!2.03e-12!15 | |ontology_enrichment_celltype=CL:0000136!2.03e-12!15 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.69e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.97e-49!115;UBERON:0001049!3.83e-49!57;UBERON:0005068!3.83e-49!57;UBERON:0006241!3.83e-49!57;UBERON:0007135!3.83e-49!57;UBERON:0003080!5.47e-48!42;UBERON:0002780!1.66e-46!41;UBERON:0001890!1.66e-46!41;UBERON:0006240!1.66e-46!41;UBERON:0002616!1.30e-42!59;UBERON:0001017!2.57e-40!82;UBERON:0000955!4.47e-40!69;UBERON:0006238!4.47e-40!69;UBERON:0001893!6.77e-40!34;UBERON:0002020!1.91e-39!34;UBERON:0003528!1.91e-39!34;UBERON:0005743!3.07e-39!86;UBERON:0002791!2.90e-38!33;UBERON:0001869!1.47e-37!32;UBERON:0000073!1.78e-35!94;UBERON:0001016!1.78e-35!94;UBERON:0002346!9.99e-32!90;UBERON:0003056!7.68e-31!61;UBERON:0003075!1.10e-30!86;UBERON:0007284!1.10e-30!86;UBERON:0002619!2.68e-29!22;UBERON:0000956!2.02e-27!25;UBERON:0000203!2.02e-27!25;UBERON:0001950!1.11e-26!20;UBERON:0000033!3.36e-20!123;UBERON:0000153!1.84e-19!129;UBERON:0007811!1.84e-19!129;UBERON:0000924!3.61e-15!173;UBERON:0006601!3.61e-15!173;UBERON:0002420!2.54e-14!9;UBERON:0007245!2.54e-14!9;UBERON:0010009!2.54e-14!9;UBERON:0010011!2.54e-14!9;UBERON:0000454!2.54e-14!9;UBERON:0004121!2.81e-14!169;UBERON:0002308!1.76e-13!9;UBERON:0000125!1.76e-13!9;UBERON:0009663!3.83e-11!7;UBERON:0000200!1.01e-10!6;UBERON:0001871!1.82e-10!7;UBERON:0000025!6.16e-10!194;UBERON:0000349!4.26e-09!5;UBERON:0001872!6.43e-09!5;UBERON:0004111!9.11e-09!241;UBERON:0002298!1.14e-08!8;UBERON:0000475!1.71e-08!365;UBERON:0000369!5.07e-08!4;UBERON:0002435!5.07e-08!4;UBERON:0000204!5.07e-08!4;UBERON:0010082!5.07e-08!4;UBERON:0001894!6.37e-08!7;UBERON:0006222!6.37e-08!7;UBERON:0000481!1.22e-07!347;UBERON:0000483!2.24e-07!309;UBERON:0000477!3.01e-07!286;UBERON:0000119!3.75e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;9.01e-43;20!UBERON:0001869;7.49e-39;32!UBERON:0002619;1.05e-38;22!UBERON:0002791;2.16e-35;32!UBERON:0001893;4.53e-35;34!UBERON:0000956;8.84e-34;25!UBERON:0000203;8.84e-34;25!UBERON:0003528;1.09e-31;34!UBERON:0002020;1.09e-31;34!UBERON:0002780;4.89e-28;41!UBERON:0001890;4.89e-28;41!UBERON:0000073;3.29e-19;53!UBERON:0002616;3.29e-19;53!UBERON:0001872;2.58e-18;5!UBERON:0001017;1.50e-16;75!UBERON:0000200;5.45e-16;6!UBERON:0000955;9.47e-15;68!UBERON:0001016;7.88e-14;83!UBERON:0001871;1.55e-13;6!UBERON:0001870;1.41e-12;3!UBERON:0002420;5.39e-11;9!UBERON:0007245;5.39e-11;9!UBERON:0010009;5.39e-11;9!UBERON:0010011;5.39e-11;9!UBERON:0000454;5.39e-11;9!UBERON:0000369;5.12e-10;4!UBERON:0002435;5.12e-10;4!UBERON:0000204;5.12e-10;4!UBERON:0007023;1.52e-09;114!UBERON:0002702;9.30e-09;2!UBERON:0001876;1.42e-08;2!UBERON:0000349;1.35e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.16e-42,20;UBERON:0001869,5.94e-42,32;UBERON:0001893,2.94e-39,34;UBERON:0002780,9.06e-39,41;UBERON:0001890,9.06e-39,41;UBERON:0003080,9.06e-39,41;UBERON:0006240,9.06e-39,41;UBERON:0002619,1.32e-38,22;UBERON:0002791,1.48e-37,32;UBERON:0003528,3.94e-35,34;UBERON:0002020,3.94e-35,34;UBERON:0000956,1.08e-33,25;UBERON:0000203,1.08e-33,25;UBERON:0000073,9.55e-32,53;UBERON:0002616,9.55e-32,53;UBERON:0001017,1.28e-31,81;UBERON:0000955,1.14e-30,68;UBERON:0006238,1.14e-30,68;UBERON:0001049,9.17e-30,56;UBERON:0005068,9.17e-30,56;UBERON:0006241,9.17e-30,56;UBERON:0007135,9.17e-30,56;UBERON:0007023,1.01e-28,114;UBERON:0001016,8.24e-28,89;UBERON:0003056,1.94e-24,61;UBERON:0002346,3.19e-19,86;UBERON:0011216,7.67e-19,223;UBERON:0003075,1.29e-18,82;UBERON:0007284,1.29e-18,82;UBERON:0001872,4.78e-18,5;UBERON:0000200,6.53e-16,6;UBERON:0001871,9.52e-14,6;UBERON:0010371,1.58e-13,104;UBERON:0001870,2.21e-12,3;UBERON:0004121,2.23e-12,171;UBERON:0000924,2.23e-12,171;UBERON:0006601,2.23e-12,171;UBERON:0010314,8.90e-12,132;UBERON:0002420,3.76e-11,9;UBERON:0007245,3.76e-11,9;UBERON:0010009,3.76e-11,9;UBERON:0010011,3.76e-11,9;UBERON:0000454,3.76e-11,9;UBERON:0000369,5.54e-10,4;UBERON:0002435,5.54e-10,4;UBERON:0000204,5.54e-10,4;UBERON:0010082,5.54e-10,4;UBERON:0001876,6.59e-09,2;UBERON:0002702,1.37e-08,2;UBERON:0000349,8.70e-08,5;UBERON:0000025,5.27e-07,192;UBERON:0004111,5.58e-07,240 | |||
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|short_description=p11@LMO3 | |short_description=p11@LMO3 | ||
}} | }} |
Latest revision as of 16:22, 17 September 2015
Short description: | p11@LMO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_LMO3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -6bp_to_ENST00000453727_5end |
EntrezGene: | LMO3 |
HGNC: | 6643 |
UniProt: | Q05D86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data