FFCP PHASE1:Hg19::chr12:16761007..16761080,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:16761007..16761080,-
|short_description=p2@LMO3
|description=CAGE_peak_2_at_LMO3_5end
|association_with_transcript=0bp_to_ENST00000354662,ENST00000396205,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55885 | |EntrezGene=55885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6643 | |HGNC=6643 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TAP4 | |UniProt=Q8TAP4 | ||
|association_with_transcript=0bp_to_ENST00000354662,ENST00000396205,ENST00000441439,ENST00000544276,uc001rdm.1,uc001rdn.1,uc001rdo.1,uc001rdp.1,uc009zij.1_5end | |||
|cluster_id=chr12:16761007..16761080,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_LMO3_5end | |||
|id=chr12:16761007..16761080,- | |||
|ontology_enrichment_celltype=CL:0000136!1.76e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.01e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.38e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.62e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.79e-44;32!UBERON:0001893;3.33e-44;34!UBERON:0002791;5.57e-44;32!UBERON:0002619;1.41e-43;22!UBERON:0003528;9.93e-42;34!UBERON:0002020;9.93e-42;34!UBERON:0001950;2.91e-40;20!UBERON:0002780;9.83e-40;41!UBERON:0001890;9.83e-40;41!UBERON:0000956;1.18e-37;25!UBERON:0000203;1.18e-37;25!UBERON:0000073;1.23e-31;53!UBERON:0002616;1.23e-31;53!UBERON:0001017;6.14e-22;75!UBERON:0000955;2.40e-21;68!UBERON:0001016;7.91e-17;83!UBERON:0002420;2.75e-16;9!UBERON:0007245;2.75e-16;9!UBERON:0010009;2.75e-16;9!UBERON:0010011;2.75e-16;9!UBERON:0000454;2.75e-16;9!UBERON:0007023;5.94e-15;114!UBERON:0001871;5.13e-14;6!UBERON:0000200;5.99e-13;6!UBERON:0009663;1.07e-12;7!UBERON:0000125;3.06e-12;9!UBERON:0002308;3.06e-12;9!UBERON:0001872;3.05e-11;5!UBERON:0000349;1.78e-10;5!UBERON:0002021;1.79e-10;5!UBERON:0000369;6.35e-09;4!UBERON:0002435;6.35e-09;4!UBERON:0000204;6.35e-09;4!UBERON:0011216;1.65e-07;132!UBERON:0001870;2.03e-07;3!UBERON:0002298;4.81e-07;6!UBERON:0005383;5.89e-07;3!UBERON:0005382;5.89e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.26e-54,53;UBERON:0002616,4.26e-54,53;UBERON:0002780,6.31e-54,41;UBERON:0001890,6.31e-54,41;UBERON:0003080,6.31e-54,41;UBERON:0006240,6.31e-54,41;UBERON:0001049,5.25e-53,56;UBERON:0005068,5.25e-53,56;UBERON:0006241,5.25e-53,56;UBERON:0007135,5.25e-53,56;UBERON:0001893,2.24e-52,34;UBERON:0007023,1.94e-51,114;UBERON:0001017,7.88e-51,81;UBERON:0001869,1.02e-49,32;UBERON:0002791,5.48e-49,32;UBERON:0003528,1.34e-48,34;UBERON:0002020,1.34e-48,34;UBERON:0000955,1.95e-48,68;UBERON:0006238,1.95e-48,68;UBERON:0001016,2.83e-44,89;UBERON:0002619,1.57e-43,22;UBERON:0001950,3.47e-40,20;UBERON:0000956,1.30e-37,25;UBERON:0000203,1.30e-37,25;UBERON:0003056,1.01e-32,61;UBERON:0003075,3.87e-32,82;UBERON:0007284,3.87e-32,82;UBERON:0002346,1.10e-31,86;UBERON:0011216,6.40e-24,223;UBERON:0010371,1.13e-22,104;UBERON:0010314,1.32e-18,132;UBERON:0004121,4.22e-17,171;UBERON:0000924,4.22e-17,171;UBERON:0006601,4.22e-17,171;UBERON:0002420,2.52e-16,9;UBERON:0007245,2.52e-16,9;UBERON:0010009,2.52e-16,9;UBERON:0010011,2.52e-16,9;UBERON:0000454,2.52e-16,9;UBERON:0001871,5.91e-14,6;UBERON:0000200,6.14e-13,6;UBERON:0009663,1.02e-12,7;UBERON:0000125,2.92e-12,9;UBERON:0002308,2.92e-12,9;UBERON:0001872,3.03e-11,5;UBERON:0000349,1.57e-10,5;UBERON:0002021,1.84e-10,5;UBERON:0000025,3.79e-10,192;UBERON:0004111,4.82e-09,240;UBERON:0000369,6.50e-09,4;UBERON:0002435,6.50e-09,4;UBERON:0000204,6.50e-09,4;UBERON:0010082,6.50e-09,4;UBERON:0001870,2.08e-07,3;UBERON:0002298,4.55e-07,6;UBERON:0005383,6.08e-07,3;UBERON:0005382,6.08e-07,3 | |||
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| ||
|short_description=p2@LMO3 | |||
}} | }} |
Latest revision as of 16:33, 17 September 2015
Short description: | p2@LMO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LMO3_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000354662, ENST00000396205, ENST00000441439, ENST00000544276, uc001rdm.1, uc001rdn.1, uc001rdo.1, uc001rdp.1, uc009zij.1_5end |
EntrezGene: | LMO3 |
HGNC: | 6643 |
UniProt: | Q8TAP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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fat cell | 2.38e-08 | 15 |