FFCP PHASE1:Hg19::chr1:156647192..156647207,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10763 | |EntrezGene=10763 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7756 | |HGNC=7756 | ||
|TSSclassifier=strong | |||
|UniProt=E7EMJ2,P48681,Q9H6U9 | |UniProt=E7EMJ2,P48681,Q9H6U9 | ||
|association_with_transcript=-3bp_to_ENST00000255024,ENST00000368223,NM_006617,uc001fpq.2_5end | |association_with_transcript=-3bp_to_ENST00000255024,ENST00000368223,NM_006617,uc001fpq.2_5end | ||
|cluster_id=chr1:156647192..156647207,- | |||
|coexpression_cluster_id=C3882 | |||
|description=CAGE_peak_1_at_NES_5end | |description=CAGE_peak_1_at_NES_5end | ||
|id=chr1:156647192..156647207,- | |id=chr1:156647192..156647207,- | ||
|ontology_enrichment_celltype=CL:0000055!2.02e-27!180;CL:0000222!7.45e-16!119;CL:0002139!8.62e-14!24;CL:0000115!1.02e-13!35;CL:0002321!3.58e-13!248;CL:0000393!1.21e-12!60;CL:0000211!1.21e-12!60;CL:0000183!1.41e-12!59;CL:0000220!1.61e-12!246;CL:0000071!3.09e-12!18;CL:0002546!3.09e-12!18;CL:0000057!4.36e-12!75;CL:0000680!1.07e-11!57;CL:0000056!1.07e-11!57;CL:0000355!1.07e-11!57;CL:0000187!1.45e-10!54;CL:0002078!2.49e-10!44;CL:0000133!4.35e-09!59;CL:1000413!2.41e-07!9;CL:0002620!6.28e-07!23 | |ontology_enrichment_celltype=CL:0000055!2.02e-27!180;CL:0000222!7.45e-16!119;CL:0002139!8.62e-14!24;CL:0000115!1.02e-13!35;CL:0002321!3.58e-13!248;CL:0000393!1.21e-12!60;CL:0000211!1.21e-12!60;CL:0000183!1.41e-12!59;CL:0000220!1.61e-12!246;CL:0000071!3.09e-12!18;CL:0002546!3.09e-12!18;CL:0000057!4.36e-12!75;CL:0000680!1.07e-11!57;CL:0000056!1.07e-11!57;CL:0000355!1.07e-11!57;CL:0000187!1.45e-10!54;CL:0002078!2.49e-10!44;CL:0000133!4.35e-09!59;CL:1000413!2.41e-07!9;CL:0002620!6.28e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.17e-14;24!CL:0000115;4.83e-13;36!CL:0000071;9.72e-13;18!CL:0002078;1.08e-07;45!CL:1000413;1.27e-07;9!CL:0000393;1.47e-07;61!CL:0000211;1.47e-07;61!CL:0002620;3.83e-07;23!CL:0000187;9.28e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.24e-17,121;CL:0000115,2.56e-15,36;CL:0002139,2.26e-14,24;CL:0000393,3.49e-13,61;CL:0000211,3.49e-13,61;CL:0000071,9.63e-13,18;CL:0002546,9.63e-13,18;CL:0000680,3.40e-12,58;CL:0000056,3.40e-12,58;CL:0000355,3.40e-12,58;CL:0002078,2.30e-11,45;CL:0000057,2.57e-11,76;CL:0000187,5.17e-11,55;CL:0002321,6.85e-11,250;CL:0000133,1.95e-09,59;CL:1000413,1.28e-07,9;CL:0002620,3.48e-07,23;CL:0000192,9.05e-07,43;CL:0000514,9.05e-07,43 | |||
|ontology_enrichment_development_v019=CL:0002546;9.72e-13;18!CL:0000355;3.00e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!8.57e-30!312;UBERON:0000483!2.80e-28!309;UBERON:0000477!3.50e-27!286;UBERON:0004111!1.47e-25!241;UBERON:0002049!3.30e-23!79;UBERON:0007798!3.30e-23!79;UBERON:0000025!5.55e-23!194;UBERON:0000468!8.96e-22!659;UBERON:0000475!2.44e-21!365;UBERON:0003914!2.60e-21!118;UBERON:0004872!3.90e-21!84;UBERON:0000480!1.39e-20!626;UBERON:0000055!1.95e-20!69;UBERON:0000467!3.76e-20!625;UBERON:0001981!2.25e-18!60;UBERON:0007500!2.25e-18!60;UBERON:0004537!2.25e-18!60;UBERON:0006965!2.25e-18!60;UBERON:0001009!8.25e-18!113;UBERON:0000481!1.08e-17!347;UBERON:0004535!8.02e-17!110;UBERON:0000490!3.50e-16!138;UBERON:0005256!6.56e-16!143;UBERON:0000914!8.23e-15!83;UBERON:0002329!8.23e-15!83;UBERON:0003077!8.23e-15!83;UBERON:0003059!8.23e-15!83;UBERON:0007282!8.23e-15!83;UBERON:0009618!8.23e-15!83;UBERON:0007285!8.23e-15!83;UBERON:0004290!1.19e-14!70;UBERON:0000922!1.27e-13!612;UBERON:0002385!4.67e-13!63;UBERON:0001015!4.67e-13!63;UBERON:0000383!4.67e-13!63;UBERON:0001134!6.54e-13!61;UBERON:0002036!6.54e-13!61;UBERON:0003082!6.54e-13!61;UBERON:0001986!3.09e-12!18;UBERON:0004638!3.09e-12!18;UBERON:0004852!3.09e-12!18;UBERON:0001637!8.13e-12!42;UBERON:0003509!8.13e-12!42;UBERON:0004572!8.13e-12!42;UBERON:0002050!2.75e-11!605;UBERON:0005423!2.75e-11!605;UBERON:0000923!4.86e-11!604;UBERON:0005291!4.86e-11!604;UBERON:0006598!4.86e-11!604;UBERON:0002532!4.86e-11!604;UBERON:0004121!8.36e-11!169;UBERON:0003103!2.55e-10!69;UBERON:0000486!2.97e-10!82;UBERON:0000924!6.49e-10!173;UBERON:0006601!6.49e-10!173;UBERON:0005743!1.77e-09!86;UBERON:0001017!1.81e-09!82;UBERON:0007100!1.90e-09!27;UBERON:0000073!3.58e-09!94;UBERON:0001016!3.58e-09!94;UBERON:0004573!4.42e-09!33;UBERON:0004571!4.42e-09!33;UBERON:0000487!5.15e-09!22;UBERON:0000033!5.56e-09!123;UBERON:0003075!1.29e-08!86;UBERON:0007284!1.29e-08!86;UBERON:0000153!1.40e-08!129;UBERON:0007811!1.40e-08!129;UBERON:0002100!1.63e-08!216;UBERON:0000948!1.95e-08!24;UBERON:0005498!1.95e-08!24;UBERON:0004140!1.95e-08!24;UBERON:0009881!1.95e-08!24;UBERON:0004141!1.95e-08!24;UBERON:0003084!1.95e-08!24;UBERON:0007005!1.95e-08!24;UBERON:0004139!1.95e-08!24;UBERON:0004291!1.95e-08!24;UBERON:0006914!5.36e-08!25;UBERON:0003104!7.94e-08!238;UBERON:0009142!7.94e-08!238;UBERON:0000947!1.36e-07!21;UBERON:0010191!1.36e-07!21;UBERON:0002346!1.63e-07!90;UBERON:0000064!2.04e-07!219;UBERON:0003915!2.41e-07!9;UBERON:0004700!2.41e-07!9;UBERON:0001917!2.41e-07!9;UBERON:0003102!3.87e-07!95;UBERON:0007023!8.06e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.72e-13;18!UBERON:0001986;9.72e-13;18!UBERON:0004852;9.72e-13;18!UBERON:0007500;2.23e-10;56!UBERON:0001981;2.23e-10;56!UBERON:0004537;2.23e-10;56!UBERON:0001637;2.99e-10;42!UBERON:0003509;2.99e-10;42!UBERON:0004572;2.99e-10;42!UBERON:0000055;4.93e-10;65!UBERON:0002049;8.58e-10;75!UBERON:0007798;8.58e-10;75!UBERON:0000487;2.65e-09;22!UBERON:0003914;5.31e-09;74!UBERON:0007100;5.87e-09;25!UBERON:0002385;6.87e-09;31!UBERON:0001015;6.87e-09;31!UBERON:0000383;6.87e-09;31!UBERON:0004573;8.40e-09;33!UBERON:0004571;8.40e-09;33!UBERON:0001134;1.89e-08;16!UBERON:0002036;1.89e-08;16!UBERON:0006914;2.43e-08;25!UBERON:0000948;6.58e-08;22!UBERON:0000947;7.09e-08;21!UBERON:0010191;7.09e-08;21!UBERON:0003915;1.27e-07;9!UBERON:0004700;1.27e-07;9!UBERON:0001917;1.27e-07;9!UBERON:0000490;7.35e-07;33 | |||
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| ||
|short_description=p1@NES | |short_description=p1@NES | ||
}} | }} |
Latest revision as of 17:12, 17 September 2015
Short description: | p1@NES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NES_5end |
Coexpression cluster: | C3882_Skeletal_skeletal_mesenchymal_Hepatic_Neural_astrocytoma_Pericytes |
Association with transcript: | -3bp_to_ENST00000255024, ENST00000368223, NM_006617, uc001fpq.2_5end |
EntrezGene: | NES |
HGNC: | 7756 |
UniProt: | E7EMJ2P48681Q9H6U9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.24e-17 | 121 |
endothelial cell | 2.56e-15 | 36 |
endothelial cell of vascular tree | 2.26e-14 | 24 |
electrically responsive cell | 3.49e-13 | 61 |
electrically active cell | 3.49e-13 | 61 |
blood vessel endothelial cell | 9.63e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.63e-13 | 18 |
muscle precursor cell | 3.40e-12 | 58 |
myoblast | 3.40e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.40e-12 | 58 |
meso-epithelial cell | 2.30e-11 | 45 |
fibroblast | 2.57e-11 | 76 |
muscle cell | 5.17e-11 | 55 |
embryonic cell | 6.85e-11 | 250 |
neurectodermal cell | 1.95e-09 | 59 |
endothelial cell of artery | 1.28e-07 | 9 |
skin fibroblast | 3.48e-07 | 23 |
smooth muscle cell | 9.05e-07 | 43 |
smooth muscle myoblast | 9.05e-07 | 43 |