FFCP PHASE1:Hg19::chr2:55561727..55561743,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55704 | |EntrezGene=55704 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25523 | |HGNC=25523 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-241bp_to_ENST00000468534_5end | |association_with_transcript=-241bp_to_ENST00000468534_5end | ||
|cluster_id=chr2:55561727..55561743,- | |||
|description=CAGE_peak_8_at_CCDC88A_5end | |description=CAGE_peak_8_at_CCDC88A_5end | ||
|id=chr2:55561727..55561743,- | |id=chr2:55561727..55561743,- | ||
|ontology_enrichment_celltype=CL:0002194!1.89e-07!63;CL:0000576!1.89e-07!63;CL:0000040!1.89e-07!63;CL:0000559!1.89e-07!63;CL:0002009!8.94e-07!65 | |ontology_enrichment_celltype=CL:0002194!1.89e-07!63;CL:0000576!1.89e-07!63;CL:0000040!1.89e-07!63;CL:0000559!1.89e-07!63;CL:0002009!8.94e-07!65 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.98e-07!235;DOID:14566!3.70e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.01e-12!82;UBERON:0000073!5.02e-12!94;UBERON:0001016!5.02e-12!94;UBERON:0001049!5.51e-12!57;UBERON:0005068!5.51e-12!57;UBERON:0006241!5.51e-12!57;UBERON:0007135!5.51e-12!57;UBERON:0005743!2.20e-11!86;UBERON:0002780!8.97e-11!41;UBERON:0001890!8.97e-11!41;UBERON:0006240!8.97e-11!41;UBERON:0002020!1.12e-10!34;UBERON:0003528!1.12e-10!34;UBERON:0000955!1.54e-10!69;UBERON:0006238!1.54e-10!69;UBERON:0002616!2.61e-10!59;UBERON:0003080!3.52e-10!42;UBERON:0002791!8.22e-10!33;UBERON:0001893!3.53e-09!34;UBERON:0001869!1.45e-08!32;UBERON:0000956!1.06e-07!25;UBERON:0000203!1.06e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;4.76e-17;32!UBERON:0003528;1.59e-15;34!UBERON:0002020;1.59e-15;34!UBERON:0001869;4.49e-15;32!UBERON:0002619;1.03e-14;22!UBERON:0001893;1.64e-14;34!UBERON:0002780;8.44e-14;41!UBERON:0001890;8.44e-14;41!UBERON:0001950;1.33e-13;20!UBERON:0000956;1.12e-12;25!UBERON:0000203;1.12e-12;25!UBERON:0000073;5.41e-12;53!UBERON:0002616;5.41e-12;53!UBERON:0002420;5.85e-10;9!UBERON:0007245;5.85e-10;9!UBERON:0010009;5.85e-10;9!UBERON:0010011;5.85e-10;9!UBERON:0000454;5.85e-10;9!UBERON:0009663;2.89e-09;7!UBERON:0001017;2.48e-08;75!UBERON:0000200;8.26e-08;6!UBERON:0001016;2.97e-07;83!UBERON:0000955;3.47e-07;68!UBERON:0000125;4.06e-07;9!UBERON:0002308;4.06e-07;9!UBERON:0002771;7.15e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002791,1.35e-19,32;UBERON:0002780,1.36e-18,41;UBERON:0001890,1.36e-18,41;UBERON:0003080,1.36e-18,41;UBERON:0006240,1.36e-18,41;UBERON:0003528,3.27e-18,34;UBERON:0002020,3.27e-18,34;UBERON:0001893,3.27e-18,34;UBERON:0001049,3.48e-17,56;UBERON:0005068,3.48e-17,56;UBERON:0006241,3.48e-17,56;UBERON:0007135,3.48e-17,56;UBERON:0001869,4.71e-17,32;UBERON:0000073,1.52e-16,53;UBERON:0002616,1.52e-16,53;UBERON:0001016,2.15e-16,89;UBERON:0001017,5.72e-16,81;UBERON:0002619,8.61e-15,22;UBERON:0000955,4.89e-14,68;UBERON:0006238,4.89e-14,68;UBERON:0003056,7.10e-14,61;UBERON:0001950,1.08e-13,20;UBERON:0000956,9.60e-13,25;UBERON:0000203,9.60e-13,25;UBERON:0002346,1.17e-12,86;UBERON:0003075,2.17e-12,82;UBERON:0007284,2.17e-12,82;UBERON:0002420,7.07e-10,9;UBERON:0007245,7.07e-10,9;UBERON:0010009,7.07e-10,9;UBERON:0010011,7.07e-10,9;UBERON:0000454,7.07e-10,9;UBERON:0010371,1.69e-09,104;UBERON:0010314,2.41e-09,132;UBERON:0009663,3.60e-09,7;UBERON:0004121,1.55e-08,171;UBERON:0000924,1.55e-08,171;UBERON:0006601,1.55e-08,171;UBERON:0000200,6.94e-08,6;UBERON:0000125,4.80e-07,9;UBERON:0002308,4.80e-07,9;UBERON:0002771,6.87e-07,2 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0.572471974262113,0.958120975510189,0.753255837568817,0,0,0,0,0,0,0,0,0,0.542270404062111,1.70603078984906,0,0,1.80490002723128,1.51907609501096,0.447830948479849,0,0,1.01778767145695,0.377875943688809,0.485168122375632,0.232429036905685,0.822335776043652,0.619412741790207,1.1507695692886,0.768482119587302,0,0.689491361473237,0.645484683583826,0,3.01187743268168,0.545812300115692,0,1.53041946185451,0,0.639337125799041,0,0.797854630486527,0.426224750532694,3.19230162491442,0.56738522469114,0.622822248995575,1.50749199154046,1.0429658368404,0,1.81619850790011,0,0,0,0.637812899895131,0.209658645508376,0.112328631146495,0.300353785683013,0,0.570025487482497,0.19891667719909,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,1.96505381374582,0.205601498999509,0,0.651844533267181,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,2.43806866313962,0,0.12786256184353,1.44575660953827,0,0.289693037921647,0,0,0.283604451492204,0.443458794925128,1.31752178539689,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.797747763113191,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.267899184852239,0,0.112611480483322,0,0,0.183201743930407,0,3.87780264148325,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0.624320153660641,0,1.04614076386261,0,0.161872944368132,0.140450806702248,0.204154171254893,0.859840221182376,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0,0,0,0,0.640672166455702,0.423863802319124,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0.609868530647977,0.397589304964456,0.580969714347592,1.14027160516907,0,0.72995471815166,0,1.92972281457866,0,0,0,0.354920400119532,0.674338760312407,0.482022059766964,0,0,0.474541238222193,0.134831308160164,0,0.769494313892781,0,0,0,0,0,0,1.18157981336281,0.882926198829301,0,0.171567810298526,0,0,0.301586917234893,0.462942225792648,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0.246217006087397,0.234004265139238,1.33768046059855,0,0,0,0.358234090811393,0,0,0,0.088048434013226,0,0.144119953416961,0,0.063497894292169,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.699810938274399,0,2.00902836572851,4.21667878966063,0.239624855491583,0,0,0.289562613335158,0.61642896765115,0.179060963239896,0,0.197030760201927,0.431255149719035,0.385029108839245,0.76228387266739,0,0.773288812777695,1.00509759200609,0,0,0,0,0.24538298343828,0,0.271265023699736,0.623912584592421,0.178428988797162,0.630809660135739,0.234282829985426,0,0,0,0,0,0.434418072340414,0,0,0.82707210449155,0,0.106727557803444,0,0,0,0,0,0,0,0,0.482561763430822,0,1.07946785661859,0.177561725313127,0,0.519254429183621,0.464841513839837,0,0.200506470303285,0.184161977871793,0.574072240823034,0.910455840033585,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.863663664408557,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,1.00726411300178,0.165018999841176,0,0,0,0,0.308097234229289,0.307007349452259,0.275673144969061,0.107420244868274,0.580066775656914,0.340906509664404,0.267096106940212,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0.571890581771475,0,0.42793898803392,0,0,0,0,0.353437207037059,0,0,0,0,0.243713489631284,0,0,0.707027159768564,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.490080431962063,1.30062222588003,0.577076851905779,0.213425530045242,1.91311527274587,0.399158742865633,0.383010740264733,0.423347165447766,0.324621940274555,1.68478306868075,1.14117339516596,0.783399478865116,0,0.338583555603207,0.642352300414798,1.21079824314629,0.851692475380653,0,0.307240764308458,0.223676107892416,0,1.36771666781428,0,0,0.270455678475983,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0.994147647766298,1.26602474769461,0.333926115068718,0,0.63337622438398,0,0,1.0077309914171,0.102268682502155,0,0,0,0,0,0,0,0,0,1.02044907978036,0,0,0,0,0.1137934482855,0.254253650292766,0,0.344743373241465,0.583209226766509,1.38899995946634,0,1.32656082487949,0,0.884634079449797,0.886642856860642,0.219385397153973,0,0.139423744278603,0.153900517007594,0,0,0,0.325942115766024,0,0,0.533034776018635,1.02193298195737,0.156980256395025,0.166211681900156,0.451191321234361,0.392125068635479,0.335643173951685,0.948768663620925,0,0.210998064528027,0,0,0.432777279484182,0,0,0,0,0,0,0.202203398942031,0.802577647298789,0.702793337176017,1.64209310294099,0,0.485560759068186,0.3945844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| ||
|short_description=p8@CCDC88A | |short_description=p8@CCDC88A | ||
}} | }} |
Latest revision as of 17:26, 17 September 2015
Short description: | p8@CCDC88A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CCDC88A_5end |
Coexpression cluster: | NA |
Association with transcript: | -241bp_to_ENST00000468534_5end |
EntrezGene: | CCDC88A |
HGNC: | 25523 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data