FFCP PHASE1:Hg19::chr3:19988462..19988489,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151651 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26330 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=11bp_to_ENST00000344838,uc003cbm.2_5end | |||
|cluster_id=chr3:19988462..19988489,- | |||
|description=CAGE_peak_1_at_EFHB_5end | |||
|id=chr3:19988462..19988489,- | |||
|ontology_enrichment_celltype=CL:0000766!1.52e-12!76;CL:0000839!1.23e-11!70;CL:0002057!2.29e-11!42;CL:0000557!2.49e-10!71;CL:0000860!2.59e-10!45;CL:0002194!5.37e-09!63;CL:0000576!5.37e-09!63;CL:0000040!5.37e-09!63;CL:0000559!5.37e-09!63;CL:0002009!6.98e-09!65;CL:0000763!3.25e-07!112;CL:0000049!3.25e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.87e-12;33!CL:0002057;1.87e-12;33!CL:0000473;2.04e-11;39!CL:0000234;2.04e-11;39!CL:0000576;3.98e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.52e-15,72;CL:0000473,1.42e-13,48;CL:0000234,1.42e-13,48;CL:0000839,2.96e-13,66;CL:0000860,6.32e-13,42;CL:0002057,6.32e-13,42;CL:0000557,3.07e-11,67;CL:0002194,1.87e-09,59;CL:0000576,1.87e-09,59;CL:0000040,1.87e-09,59;CL:0000559,1.87e-09,59;CL:0002009,7.95e-09,61;CL:0000763,1.27e-07,108;CL:0000049,1.27e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.38e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.23e-15!115;UBERON:0005743!3.46e-15!86;UBERON:0001049!3.78e-15!57;UBERON:0005068!3.78e-15!57;UBERON:0006241!3.78e-15!57;UBERON:0007135!3.78e-15!57;UBERON:0002616!4.77e-15!59;UBERON:0001017!9.76e-15!82;UBERON:0000955!2.94e-14!69;UBERON:0006238!2.94e-14!69;UBERON:0000073!5.97e-13!94;UBERON:0001016!5.97e-13!94;UBERON:0002780!6.04e-12!41;UBERON:0001890!6.04e-12!41;UBERON:0006240!6.04e-12!41;UBERON:0001893!6.15e-12!34;UBERON:0002791!2.26e-11!33;UBERON:0002020!3.57e-11!34;UBERON:0003528!3.57e-11!34;UBERON:0003080!3.65e-11!42;UBERON:0001869!1.06e-10!32;UBERON:0002371!3.75e-10!80;UBERON:0003075!6.12e-10!86;UBERON:0007284!6.12e-10!86;UBERON:0002193!8.74e-10!112;UBERON:0002346!2.33e-09!90;UBERON:0000956!4.09e-09!25;UBERON:0000203!4.09e-09!25;UBERON:0002390!4.80e-09!102;UBERON:0003061!4.80e-09!102;UBERON:0001474!1.39e-08!86;UBERON:0002619!1.52e-08!22;UBERON:0000153!2.29e-08!129;UBERON:0007811!2.29e-08!129;UBERON:0003056!2.29e-08!61;UBERON:0004765!3.94e-08!101;UBERON:0001434!3.94e-08!101;UBERON:0000033!5.13e-08!123;UBERON:0001950!1.87e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.83e-13;41!UBERON:0001890;8.83e-13;41!UBERON:0001893;1.68e-12;34!UBERON:0000073;5.04e-12;53!UBERON:0002616;5.04e-12;53!UBERON:0003528;6.66e-12;34!UBERON:0002020;6.66e-12;34!UBERON:0001869;8.20e-12;32!UBERON:0002791;1.42e-11;32!UBERON:0002619;1.73e-11;22!UBERON:0000956;8.69e-11;25!UBERON:0000203;8.69e-11;25!UBERON:0001950;9.05e-10;20!UBERON:0001017;1.17e-07;75!UBERON:0000955;6.22e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.28e-20,56;UBERON:0005068,4.28e-20,56;UBERON:0006241,4.28e-20,56;UBERON:0007135,4.28e-20,56;UBERON:0000073,3.30e-19,53;UBERON:0002616,3.30e-19,53;UBERON:0001017,7.54e-18,81;UBERON:0000955,1.63e-17,68;UBERON:0006238,1.63e-17,68;UBERON:0002780,4.43e-16,41;UBERON:0001890,4.43e-16,41;UBERON:0003080,4.43e-16,41;UBERON:0006240,4.43e-16,41;UBERON:0001893,2.87e-15,34;UBERON:0007023,2.91e-15,114;UBERON:0001016,3.44e-15,89;UBERON:0003075,4.95e-14,82;UBERON:0007284,4.95e-14,82;UBERON:0003528,1.17e-13,34;UBERON:0002020,1.17e-13,34;UBERON:0002346,1.55e-13,86;UBERON:0002791,1.78e-13,32;UBERON:0001869,2.15e-13,32;UBERON:0003056,1.82e-11,61;UBERON:0002371,1.86e-11,76;UBERON:0002619,2.02e-11,22;UBERON:0000956,9.65e-11,25;UBERON:0000203,9.65e-11,25;UBERON:0010314,5.48e-10,132;UBERON:0002405,6.39e-10,93;UBERON:0010371,6.70e-10,104;UBERON:0001950,9.88e-10,20;UBERON:0001474,1.06e-09,82;UBERON:0002390,1.13e-08,98;UBERON:0003061,1.13e-08,98;UBERON:0002193,1.17e-08,108;UBERON:0001434,1.98e-08,100;UBERON:0004765,2.38e-08,90;UBERON:0004121,9.17e-07,171;UBERON:0000924,9.17e-07,171;UBERON:0006601,9.17e-07,171 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.563817616383885,0,0,0,0,0.631719873426831,2.87304191019822,0,0,0,0.263766978228454,0.37129905888014,0.331397375727916,0,0.602694528023977,0,0,0.984968464614303,1.42800483870977,0.940364164434263,2.57612388417951,0.958120975510189,0.627713197974014,0.229240217243854,0.328402357799783,0.314843125254717,0.393364276848904,1.15148819429164,1.70297735647684,0,0.30120591877825,0,0.309868802321207,0.284338464974843,0,1.66198622559563,1.40381113229099,0.651032612147555,0.895661896959697,0.971680998056939,1.28787783817093,3.92575244704825,1.13362783106643,1.69808842831471,2.78914844286822,0.411167888021826,1.23882548358041,2.58923153089935,0.256160706529101,3.07426898855161,2.41321976515633,1.93645405075148,4.06279459783025,2.82363509313907,0.818718450173537,1.12361742222542,3.97909060082173,1.60464513538047,2.55734850319616,2.30895910130701,0.797854630486527,1.27867425159808,5.22376629531451,2.26954089876456,1.86846674698672,2.51248665256743,1.0429658368404,1.73751075764093,4.23779651843358,2.57794345191295,3.79754864929061,1.05627643155971,1.06302149982522,0.209658645508376,0.673971786878971,0.750884464207532,0,0.570025487482497,0.79566670879636,0,3.51992488922645,0,0,0.426730222566507,0.400395987036012,1.72425731986345,2.64417949113945,0,0.569212969109448,0,1.52909291250092,0,0,1.05353633910031,0.590129310341499,0,0,1.00311897234407,0.977766799900771,0.946895611469467,0,0.668462741311041,0,0.664601683750863,0,0.768547918354051,0.130059347559878,0.986627427622057,1.10540007114339,0.579606171470105,0.444859689486181,1.07016331235885,0,0.679856056185397,1.53288197440768,0.68725489096526,0,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0,0.534880391567015,0.434473211648397,2.43806866313962,0,0,0.361439152384566,1.50401373190767,0.434539556882471,0.795285947051099,1.45990461090791,1.98523116044542,0.665188192387692,0.527008714158756,1.30979075497713,0,0.741568885568859,0.324547393654683,0.174129737299267,0.132957960518865,0,1.14398982156026,1.11437250398869,0.596287222100115,0,1.04142150482278,0.56530794192401,0.838998872419812,0,1.04497483268405,0.516833518338658,1.06729878806013,0.66944122552934,0.402829317109147,0,0.24406205754817,0.735326160691737,1.62028389576352,0.892997282840798,0.673588117878509,1.12611480483322,1.53316637465883,0,0,5.27121669744253,3.87780264148325,0.872188104285069,0,0.12663051166458,1.58891016975863,0,0.354668382198357,0,1.06748995729705,0.49333509683432,1.55605517699883,0.134710672069688,0.817309515567294,1.36221684880438,0.576175924479999,0,0.624320153660641,1.1409436430889,0.149448680551801,0.587172493218824,0.485618833104395,0,1.42907919878425,0.61417158655884,1.85986406116378,1.18800285728205,0.989067717114227,1.82032272387605,0,0.841680569770331,1.12606667884768,0.554128230968366,0.438977620880838,0.30648779579902,1.20190447125277,0.113432183160021,0.89694817844431,2.34913127700424,0.423863802319124,0.600182192168805,1.03052529238439,0.515281080091258,2.23340227597908,0.168776332241266,0.584622030967192,0.252433774244115,0.368199594569197,2.7479829659198,1.06502877754984,0.403008392910561,0.339121184620975,0,0.272746120590835,0,0.121973706129595,0,0.69716365721711,0.621966330092223,0,0,1.56449532329816,2.57296375277154,0,0.928735856063958,1.44375896333917,0.236613600079688,0.842923450390509,0,0.330881918197182,0,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0.882926198829301,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,2.20267769452646,0.234817388471643,1.29929802984966,0.462985512576611,0.570762456703795,0.790204397959275,3.43394464837949,1.47730203652438,0.936017060556951,1.63494278517601,0,0,0.141775097242386,0.179117045405697,0,0.383382679165211,4.43396914106349,2.11316241631742,1.86595303986695,3.31475892859011,2.14612136824846,0.571481048629521,0,3.51652341630141,0,1.13110241973656,0.600686115687835,0.285826432630578,0.897048674762886,0.87192013766656,0.1466765716419,1.29271715757778,3.57656445851882,0,0.26593811658487,1.04007436911366,0.514414748524284,1.41849132023278,0.266422179016099,1.85871391755592,0.542621605391443,0.823240336780769,0,0,0,0,0.871533458600294,0.299918973546171,1.2162378064119,1.00451418286425,0,1.19812427745791,2.29723871668228,0,0.434343920002738,0.61642896765115,1.25342674267927,0.224170287987055,0.197030760201927,0.215627574859517,0.513372145118994,2.7950408664471,1.30139853857622,0.773288812777695,0.670065061337395,0,1.49801404789436,0,1.65766205374414,0.36807447515742,1.50051156317903,0,1.03985430765404,1.42743191037729,1.89242898040722,1.17141414992713,0.300946099727719,0,2.0694614258501,0,0,1.04260337361699,1.17480694477644,1.02943027143257,0,0.862856803274467,1.49418580924822,0.303127571446259,3.32870879020994,0,0.744323423456331,0.460385919864187,0.841980283299221,0.384417447767103,2.04682899626681,0.160853921143607,0,0.154209693802656,0.177561725313127,0.410635780069046,1.03850885836724,0.116210378459959,0.241718899183244,0,0.276242966807689,0.34444334449382,0.182091168006717,0.917870904715969,0,0.0770153371044148,1.56869953835371,0,0.316654886678627,0,1.02056223165909,0.215915916102139,1.54227252690289,0,0,0,0,0.447749509444357,1.53481913652154,1.5686127061494,0.769350375349168,0.328014645699706,0.650756789328606,0.206082023295445,0,0.330037999682352,0,0,0,0.773365746336976,0.616194468458578,0.460511024178389,0.413509717453592,1.82614416276065,0.725083469571143,0.767039646744908,0.0890320356467374,0.165284915360978,0.192190067365106,0.765676274967505,0.4046311234222,0,0,1.3940745403212,0.308033580176089,0,0,0.37064843820784,0,1.116475108079,1.89827654831236,0.571890581771475,0.767693373934002,2.56763392820352,0.636406495851874,0,0.359744915166629,0.54907405947211,1.41374882814824,0.404364963146632,1.58510321173008,0,0,0,0,0.682499557039929,1.1312434556297,0,0,1.99031692572366,0,0,0,0,0.92947049429925,0.281695602532241,0.143411352204052,0.0982490410131212,0,0.709522128141196,0.211107635297664,1.64647446479951,0.379473173765715,1.04980416073495,0.0962221127255121,1.34060455107157,0,0,0,0,0.443430153536676,0.229723400206959,1.01489521846434,0,1.70894156152249,0.238231775457789,0.411362273086194,0,1.08006287447623,0.79312517629427,0.106824071127473,0,0,0,0.28853842595289,0,0,0.59873811429845,0.191505370132367,0,0.324621940274555,0.842391534340376,0.456469358066384,0,0,0.50787533340481,0.481764225311099,0,0,0,0.307240764308458,0.447352215784832,0.333698283423817,0.586164286206121,0.278406173895242,0,1.35227839237992,0,0,0,0.879049075631364,0.242721043499027,0.111443384277478,0.568272293612826,0,1.18785872333055,0.614321404198464,0,4.3607519087259,0,0,0.422250816255987,0.597743964753209,1.10513566212459,0,0.20453736500431,0,0.622079175323615,0,0,2.55786185113436,0.295930216910801,0,1.11136990144637,3.87733098438087,4.17456441728331,1.99613798001194,1.30213880542617,0.174919999992391,0,0,0.254253650292766,0,0,0.291604613383254,0.694499979733169,1.77148277162768,4.70326110639091,0,1.54810963903714,1.77328571372128,1.31631238292384,1.0893846351899,0,1.15425387755696,1.36730467016401,0,0,0.217294743844016,0,0.183195186803725,0,0,0,0,0.225595660617181,0.588187602953219,0.335643173951685,0.189753732724185,0.317873157960757,0,0.326465616318295,0,0.432777279484182,0,0.353830258013357,0.611030144933625,0.593042257361244,0.617819694732514,0.313265848516366,5.25728837249281,1.60515529459758,3.74823113160543,0.182454789215666,0.19566461893209,0.485560759068186,0.394584402849391,0,0.30607276163049,2.02197054811161,0.300646838828985,0.103688191397247,0,0.330991955875499,0,0,0.284609546029793,0,0,0,0.0870592065804026,1.92199335066233,0.343972064943233,0,0.65780385377567,0.246346371159628,0.581934098930517,0,0,0,0.397429223405979,4.43175571691151,0,0,0.213452994739353,0.39961921916426,0.144090417154106,0.229073192331831,0.171594997861965,0,0,0,0.543616824294456,0.627617077873999,0.713987523454252,0,0,3.83335060897581,0,0,0.525774708558629,0,1.60412296808179,0,0.998395002494955,0,0,0.671834724867263,0,0,0.0787831823072236,0.247247575143499,0.202210631562555,0,0.338693328263138,2.38568906942791,7.62739074224823,0.160753148465019,0.137539436597234,0,0.2249738915515,0.77380195455795,4.79921497598395,1.0063040627978,1.49730843868477,1.57363764404994,0,0.179287339332845,0,2.1440859791201,0.662091970365432,0,0.542999601753713,1.72844298240254,3.26587360109409,0,0.082092520749339,0.851940108927109,0,0.146552233678082,0,0.517131825446202,3.70251284879532,0,2.81926008926669,0.747511887973863,0.314408610199332,1.24271716604159,1.48849806543585,0,0,0,3.80812462358632,3.5096585163178,2.75711019087115,0.327872630709804,0.157054096250234,2.65820453990096,0.732157589411779,4.256491644021,1.72022758707021,4.54809111301094,3.53949496765886,0.276697269872462,0,0.151649117541648,0,0,0.468334905806882,0.724605143054126,0.149254802886874,0.467426619694449,0,0,3.0188148210309,2.66943366478961,0.228840068396924,0.453692771289717,0.777186002913902,0.147855149989634,0,0,1.55262956876259,0,0.265841714557995,0,1.20206087197775,0.380805212168795,0,0.363697318405119,0.644463342254931,1.85613503951397,0,0,0.686791410365586,0.336749488765919,5.04739592914604,0,0,0,0.906823702049089,1.389134845943,0.489473409012935,2.14906609297785,0.308801447160972,0,0.176689145945881,0.192914038270915,0.337884881306145,3.07489822305536,0.690860683462397,0,4.28601152070365,0.779441235357554,0.265729680626726,0.327130788511688,0.327609848846413,0,0,0.19998739585493,0.746842107858986,0.172214979660816,0.567515953566836,0,0,1.24415452006595,0.255788742607303,0.107824811396682,0,0.218419276384028,0,2.12574920101683,0.123935764259002,0,0,0.552032215008773,0,0.705351887381368,1.531227386766,2.82608590424422,2.8339315265117,2.39450788585727,0.82046545696302,3.27693205088234,2.21303207885497,2.90656162137332,1.42769420259154,0,0.11796972334774,0,0,0.762764190934334,0,0.198916222116275,2.03067886542995,0,1.56302802246618,0,0.327543835020193,0,3.57949198477492,2.34323429584154,4.96048311602842,3.86836442182832,0.546974809018219,0,2.48105589194647,0.175871244359621,0,0.535701835878287,1.00885116665647,0,2.73194629621557,0.79832133146375,0.345701962667338,0.171488009437418,3.53442611479525,3.7490480930824,0.354581522651905,0,0.78493092850514,0.471346769748006,0,0,0.647782773655864,0.47775168788705,3.4308741204795,0.316027223465453,0,0,0,0.62164849248911,0.3414369541879,0,0.860454717640555,0.354996002191696,0.681707238073262,0.423387050190929,2.52017555398455,0.31020638566432,0,0,0,0,0,0.615976841137482,0,0,0.233939463462106,0,1.30812099855325,0.11294608203896,0.219881033490858,0,0.540219106755613,2.40415516554353,0,2.69663153929296,0,0.588925401344836,5.04978880556046,1.6906229103336,0,0.939839179798536,0.773494655682926,0,0,0,0.722172300202514,0,0,5.3035645766037,0.157771562193185,3.05961705859116,0.872701380680755,0,1.48798007266701,0.924351257262837,1.29787968637137,0,0.218531143927391,0,0,0,0,0,0.833565680400634,0.803892390468535,0,5.89568076412803,0.852935927603924,1.90451545170992,0.193766729508018,0.434523000071005,0.224263725161227,1.01835453245064,1.21270313374932,0.217716747896961,0.342233301085281,0.740872583160463,0.78894425931944,0.332660356546013,0.244209805832924,0,0,0.179650404213174,0,1.58913877437726,0.406896178315738,0.665756774185513,0.402547587182052,0 | |||
|short_description=p1@EFHB | |||
}} |
Latest revision as of 18:00, 17 September 2015
Short description: | p1@EFHB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EFHB_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000344838, uc003cbm.2_5end |
EntrezGene: | EFHB |
HGNC: | 26330 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.52e-15 | 72 |
defensive cell | 1.42e-13 | 48 |
phagocyte | 1.42e-13 | 48 |
myeloid lineage restricted progenitor cell | 2.96e-13 | 66 |
classical monocyte | 6.32e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.32e-13 | 42 |
granulocyte monocyte progenitor cell | 3.07e-11 | 67 |
monopoietic cell | 1.87e-09 | 59 |
monocyte | 1.87e-09 | 59 |
monoblast | 1.87e-09 | 59 |
promonocyte | 1.87e-09 | 59 |
macrophage dendritic cell progenitor | 7.95e-09 | 61 |
myeloid cell | 1.27e-07 | 108 |
common myeloid progenitor | 1.27e-07 | 108 |