FFCP PHASE1:Hg19::chr4:40201954..40201986,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:40201954..40201986,+
|short_description=p6@RHOH
|description=CAGE_peak_6_at_RHOH_5end
|association_with_transcript=0bp_to_ENST00000503978,ENST00000511121_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=399 | |EntrezGene=399 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=686 | |HGNC=686 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000503978,ENST00000511121_5end | |||
|cluster_id=chr4:40201954..40201986,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_6_at_RHOH_5end | |||
|id=chr4:40201954..40201986,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.68e-54!172;CL:0000566!1.68e-54!172;CL:0002032!9.38e-54!165;CL:0000837!9.38e-54!165;CL:0000988!2.45e-53!182;CL:0000738!3.90e-45!140;CL:0002031!2.53e-40!124;CL:0002087!4.91e-36!119;CL:0000763!4.90e-29!112;CL:0000049!4.90e-29!112;CL:0002057!9.09e-23!42;CL:0000542!1.76e-22!53;CL:0000051!1.76e-22!53;CL:0000838!1.18e-21!52;CL:0000860!1.70e-20!45;CL:0000766!1.27e-18!76;CL:0000839!5.11e-17!70;CL:0000557!8.76e-17!71;CL:0000791!1.38e-14!18;CL:0000789!1.38e-14!18;CL:0002420!1.38e-14!18;CL:0002419!1.38e-14!18;CL:0000790!1.38e-14!18;CL:0002009!2.86e-13!65;CL:0000084!3.99e-13!25;CL:0000827!3.99e-13!25;CL:0002194!4.46e-12!63;CL:0000576!4.46e-12!63;CL:0000040!4.46e-12!63;CL:0000559!4.46e-12!63;CL:0000134!8.86e-11!358;CL:0002320!4.70e-10!365;CL:0000624!3.38e-08!6;CL:0000219!6.36e-08!390;CL:0000945!8.75e-08!24;CL:0000826!8.75e-08!24;CL:0000625!1.60e-07!11;CL:0002274!2.67e-07!5;CL:0000457!2.67e-07!5;CL:0002191!2.67e-07!5;CL:0000097!2.67e-07!5;CL:0000831!2.67e-07!5;CL:0002028!2.67e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.58e-24;33!CL:0002057;4.58e-24;33!CL:0000473;1.92e-16;39!CL:0000234;1.92e-16;39!CL:0000624;9.18e-16;6!CL:0000576;1.22e-14;48!CL:0000766;5.61e-14;69!CL:0000097;2.46e-13;5!CL:0002087;1.92e-12;104!CL:0000791;2.15e-12;18!CL:0000789;2.15e-12;18!CL:0002419;2.15e-12;18!CL:0000084;4.06e-10;25!CL:0000898;4.82e-09;3!CL:0000767;9.99e-09;3!CL:0000738;1.31e-08;136!CL:0000763;2.59e-08;100!CL:0000163;3.06e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.90e-41,136;CL:0002031,5.92e-36,120;CL:0000037,1.79e-33,168;CL:0002032,2.05e-32,161;CL:0000837,2.05e-32,161;CL:0000988,4.45e-31,177;CL:0002087,1.83e-30,115;CL:0000766,5.76e-29,72;CL:0000860,1.59e-27,42;CL:0002057,1.59e-27,42;CL:0000557,4.21e-25,67;CL:0000839,1.07e-23,66;CL:0000473,2.77e-23,48;CL:0000234,2.77e-23,48;CL:0000763,2.04e-20,108;CL:0000049,2.04e-20,108;CL:0002009,2.98e-18,61;CL:0002194,2.24e-17,59;CL:0000576,2.24e-17,59;CL:0000040,2.24e-17,59;CL:0000559,2.24e-17,59;CL:0000624,2.37e-15,6;CL:0000097,1.71e-13,5;CL:0002028,1.71e-13,5;CL:0000791,3.64e-12,18;CL:0000789,3.64e-12,18;CL:0002420,3.64e-12,18;CL:0002419,3.64e-12,18;CL:0000790,3.64e-12,18;CL:0000838,1.94e-11,52;CL:0000542,3.85e-11,53;CL:0000051,3.85e-11,53;CL:0000084,6.23e-10,25;CL:0000827,6.23e-10,25;CL:0000134,6.04e-09,354;CL:0000767,6.17e-09,3;CL:0000898,7.07e-09,3;CL:0002320,1.57e-08,361;CL:0000163,2.53e-07,9;CL:0000219,4.34e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.58e-19;42!CL:0000790;2.15e-12;18 | |||
|ontology_enrichment_disease=DOID:2531!5.03e-09!51;DOID:0060083!5.03e-09!51;DOID:8692!9.02e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.91e-23!102;UBERON:0003061!1.91e-23!102;UBERON:0002193!9.91e-21!112;UBERON:0002371!1.68e-13!80;UBERON:0001474!1.75e-12!86;UBERON:0002405!2.56e-11!115;UBERON:0002384!1.81e-09!375;UBERON:0004765!6.49e-09!101;UBERON:0001434!6.49e-09!101;UBERON:0000178!2.85e-07!15;UBERON:0000179!2.85e-07!15;UBERON:0000463!2.85e-07!15;UBERON:0004177!5.00e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.05e-24,98;UBERON:0003061,1.05e-24,98;UBERON:0002193,1.49e-21,108;UBERON:0002371,3.09e-21,76;UBERON:0001474,3.92e-19,82;UBERON:0002405,8.13e-19,93;UBERON:0004765,9.06e-17,90;UBERON:0001434,2.34e-14,100;UBERON:0002384,5.71e-08,371;UBERON:0003081,2.18e-07,203 | |||
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|short_description=p6@RHOH | |||
}} | }} |
Latest revision as of 18:13, 17 September 2015
Short description: | p6@RHOH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RHOH_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000503978, ENST00000511121_5end |
EntrezGene: | RHOH |
HGNC: | 686 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.05e-24 | 98 |
blood island | 1.05e-24 | 98 |
hemolymphoid system | 1.49e-21 | 108 |
bone marrow | 3.09e-21 | 76 |
bone element | 3.92e-19 | 82 |
immune system | 8.13e-19 | 93 |
skeletal element | 9.06e-17 | 90 |
skeletal system | 2.34e-14 | 100 |
connective tissue | 5.71e-08 | 371 |
lateral plate mesoderm | 2.18e-07 | 203 |