FFCP PHASE1:Hg19::chr12:2162144..2162196,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=775 | |EntrezGene=775 | ||
| Line 7: | Line 7: | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q13936,E9PDJ1,E9PDJ0 | |UniProt=Q13936,E9PDJ1,E9PDJ0 | ||
|association_with_transcript=-219bp_to_NM_000719,NM_001129827,NM_001129829,NM_001129830,NM_001129831,NM_001129832,NM_001129833,NM_001129834,NM_001129835,NM_001129836,NM_001129837,NM_001129838,NM_001129839,NM_001129840,NM_001129841,NM_001129842,NM_001129843,NM_001129844,NM_001129846, | |association_with_transcript=-219bp_to_NM_000719,NM_001129827,NM_001129829,NM_001129830,NM_001129831,NM_001129832,NM_001129833,NM_001129834,NM_001129835,NM_001129836,NM_001129837,NM_001129838,NM_001129839,NM_001129840,NM_001129841,NM_001129842,NM_001129843,NM_001129844,NM_001129846,N | ||
|cluster_id=chr12:2162144..2162196,+ | |||
|coexpression_cluster_id=C3266 | |coexpression_cluster_id=C3266 | ||
|description=CAGE_peak_1_at_CACNA1C_5end | |description=CAGE_peak_1_at_CACNA1C_5end | ||
Latest revision as of 19:29, 17 September 2015
| Short description: | p1@CACNA1C |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_CACNA1C_5end |
| Coexpression cluster: | C3266_uterus_aorta_smooth_colon_Olfactory_Fibroblast_dura |
| Association with transcript: | -219bp_to_NM_000719, NM_001129827, NM_001129829, NM_001129830, NM_001129831, NM_001129832, NM_001129833, NM_001129834, NM_001129835, NM_001129836, NM_001129837, NM_001129838, NM_001129839, NM_001129840, NM_001129841, NM_001129842, NM_001129843, NM_001129844, NM_001129846, N |
| EntrezGene: | CACNA1C |
| HGNC: | 1390 |
| UniProt: | Q13936E9PDJ1E9PDJ0 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 4.31e-16 | 76 |
| skin fibroblast | 1.02e-09 | 23 |
