FFCP PHASE1:Hg19::chr5:36680383..36680394,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6507 | |EntrezGene=6507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10941 | |HGNC=10941 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-54bp_to_ENST00000506178_5end | |association_with_transcript=-54bp_to_ENST00000506178_5end | ||
|cluster_id=chr5:36680383..36680394,+ | |||
|coexpression_cluster_id=C4250 | |||
|description=CAGE_peak_15_at_SLC1A3_5end | |description=CAGE_peak_15_at_SLC1A3_5end | ||
|id=chr5:36680383..36680394,+ | |id=chr5:36680383..36680394,+ | ||
|ontology_enrichment_celltype=CL:0002194!1.75e-72!63;CL:0000576!1.75e-72!63;CL:0000040!1.75e-72!63;CL:0000559!1.75e-72!63;CL:0002009!5.22e-70!65;CL:0000839!1.98e-64!70;CL:0000557!2.09e-63!71;CL:0000766!4.70e-62!76;CL:0002057!2.25e-54!42;CL:0000860!2.74e-50!45;CL:0000763!2.67e-39!112;CL:0000049!2.67e-39!112;CL:0002087!2.01e-36!119;CL:0002031!1.27e-32!124;CL:0000738!2.00e-31!140;CL:0000037!7.32e-24!172;CL:0000566!7.32e-24!172;CL:0002032!8.87e-24!165;CL:0000837!8.87e-24!165;CL:0000988!4.82e-22!182;CL:0002619!2.20e-12!3;CL:0000235!1.56e-09!10;CL:0000134!1.04e-08!358;CL:0002320!2.33e-08!365;CL:0000219!3.86e-07!390 | |ontology_enrichment_celltype=CL:0002194!1.75e-72!63;CL:0000576!1.75e-72!63;CL:0000040!1.75e-72!63;CL:0000559!1.75e-72!63;CL:0002009!5.22e-70!65;CL:0000839!1.98e-64!70;CL:0000557!2.09e-63!71;CL:0000766!4.70e-62!76;CL:0002057!2.25e-54!42;CL:0000860!2.74e-50!45;CL:0000763!2.67e-39!112;CL:0000049!2.67e-39!112;CL:0002087!2.01e-36!119;CL:0002031!1.27e-32!124;CL:0000738!2.00e-31!140;CL:0000037!7.32e-24!172;CL:0000566!7.32e-24!172;CL:0002032!8.87e-24!165;CL:0000837!8.87e-24!165;CL:0000988!4.82e-22!182;CL:0002619!2.20e-12!3;CL:0000235!1.56e-09!10;CL:0000134!1.04e-08!358;CL:0002320!2.33e-08!365;CL:0000219!3.86e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.60e-57;39!CL:0000234;2.60e-57;39!CL:0000860;1.35e-45;33!CL:0002057;1.35e-45;33!CL:0000576;7.74e-36;48!CL:0000766;5.87e-31;69!CL:0002619;1.98e-26;3!CL:0000235;1.52e-23;6!CL:0002087;2.67e-14;104!CL:0000763;3.77e-13;100!CL:0000738;8.75e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.05e-73,59;CL:0000576,4.05e-73,59;CL:0000040,4.05e-73,59;CL:0000559,4.05e-73,59;CL:0002009,1.15e-70,61;CL:0000473,4.21e-69,48;CL:0000234,4.21e-69,48;CL:0000839,3.62e-65,66;CL:0000557,3.64e-64,67;CL:0000766,1.45e-59,72;CL:0000860,3.82e-50,42;CL:0002057,3.82e-50,42;CL:0000763,7.07e-39,108;CL:0000049,7.07e-39,108;CL:0002087,2.42e-36,115;CL:0002031,1.04e-34,120;CL:0000738,2.76e-30,136;CL:0002619,1.46e-26,3;CL:0002032,4.08e-25,161;CL:0000837,4.08e-25,161;CL:0000037,6.09e-24,168;CL:0000235,1.66e-23,6;CL:0000988,1.45e-22,177;CL:0000134,1.30e-09,354;CL:0002320,2.34e-09,361;CL:0000219,1.85e-08,386;CL:0000048,2.34e-07,427;CL:0000723,3.32e-07,433;CL:0000034,5.23e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.20e-33;42!CL:0000049;1.13e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.45e-55!80;UBERON:0001474!6.93e-51!86;UBERON:0002390!5.60e-44!102;UBERON:0003061!5.60e-44!102;UBERON:0004765!4.76e-42!101;UBERON:0001434!4.76e-42!101;UBERON:0002193!2.94e-39!112;UBERON:0002405!7.27e-36!115;UBERON:0002204!6.15e-22!167;UBERON:0003081!3.93e-17!216;UBERON:0002384!1.48e-08!375 | |ontology_enrichment_uberon=UBERON:0002371!2.45e-55!80;UBERON:0001474!6.93e-51!86;UBERON:0002390!5.60e-44!102;UBERON:0003061!5.60e-44!102;UBERON:0004765!4.76e-42!101;UBERON:0001434!4.76e-42!101;UBERON:0002193!2.94e-39!112;UBERON:0002405!7.27e-36!115;UBERON:0002204!6.15e-22!167;UBERON:0003081!3.93e-17!216;UBERON:0002384!1.48e-08!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.59e-56,76;UBERON:0001474,5.06e-52,82;UBERON:0004765,3.52e-47,90;UBERON:0002405,1.41e-45,93;UBERON:0002390,4.06e-43,98;UBERON:0003061,4.06e-43,98;UBERON:0001434,3.34e-42,100;UBERON:0002193,7.07e-39,108;UBERON:0002204,4.20e-24,167;UBERON:0003081,2.86e-19,203;UBERON:0000926,3.11e-11,315;UBERON:0004120,3.11e-11,315;UBERON:0006603,3.11e-11,315;UBERON:0002384,5.20e-09,371 | |||
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|short_description=p15@SLC1A3 | |short_description=p15@SLC1A3 | ||
}} | }} |
Latest revision as of 19:31, 17 September 2015
Short description: | p15@SLC1A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_SLC1A3_5end |
Coexpression cluster: | C4250_Macrophage_CD14_lung_Monocytederived_Melanocyte_Dendritic_mature |
Association with transcript: | -54bp_to_ENST00000506178_5end |
EntrezGene: | SLC1A3 |
HGNC: | 10941 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 4.05e-73 | 59 |
monocyte | 4.05e-73 | 59 |
monoblast | 4.05e-73 | 59 |
promonocyte | 4.05e-73 | 59 |
macrophage dendritic cell progenitor | 1.15e-70 | 61 |
defensive cell | 4.21e-69 | 48 |
phagocyte | 4.21e-69 | 48 |
myeloid lineage restricted progenitor cell | 3.62e-65 | 66 |
granulocyte monocyte progenitor cell | 3.64e-64 | 67 |
myeloid leukocyte | 1.45e-59 | 72 |
classical monocyte | 3.82e-50 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.82e-50 | 42 |
myeloid cell | 7.07e-39 | 108 |
common myeloid progenitor | 7.07e-39 | 108 |
nongranular leukocyte | 2.42e-36 | 115 |
hematopoietic lineage restricted progenitor cell | 1.04e-34 | 120 |
leukocyte | 2.76e-30 | 136 |
adult endothelial progenitor cell | 1.46e-26 | 3 |
hematopoietic oligopotent progenitor cell | 4.08e-25 | 161 |
hematopoietic multipotent progenitor cell | 4.08e-25 | 161 |
hematopoietic stem cell | 6.09e-24 | 168 |
macrophage | 1.66e-23 | 6 |
hematopoietic cell | 1.45e-22 | 177 |
mesenchymal cell | 1.30e-09 | 354 |
connective tissue cell | 2.34e-09 | 361 |
motile cell | 1.85e-08 | 386 |
multi fate stem cell | 2.34e-07 | 427 |
somatic stem cell | 3.32e-07 | 433 |
stem cell | 5.23e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.59e-56 | 76 |
bone element | 5.06e-52 | 82 |
skeletal element | 3.52e-47 | 90 |
immune system | 1.41e-45 | 93 |
hematopoietic system | 4.06e-43 | 98 |
blood island | 4.06e-43 | 98 |
skeletal system | 3.34e-42 | 100 |
hemolymphoid system | 7.07e-39 | 108 |
musculoskeletal system | 4.20e-24 | 167 |
lateral plate mesoderm | 2.86e-19 | 203 |
mesoderm | 3.11e-11 | 315 |
mesoderm-derived structure | 3.11e-11 | 315 |
presumptive mesoderm | 3.11e-11 | 315 |
connective tissue | 5.20e-09 | 371 |