FFCP PHASE1:Hg19::chr17:76126842..76126896,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147138 | |EntrezGene=147138 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20474 | |HGNC=20474 | ||
|TSSclassifier=strong | |||
|UniProt=C9JFE2,Q8IU68,B3KXZ8 | |UniProt=C9JFE2,Q8IU68,B3KXZ8 | ||
|association_with_transcript=0bp_to_ENST00000301627,ENST00000318430,NM_152468,uc002jup.2,uc002juq.2,uc010dhh.1_5end | |association_with_transcript=0bp_to_ENST00000301627,ENST00000318430,NM_152468,uc002jup.2,uc002juq.2,uc010dhh.1_5end | ||
|cluster_id=chr17:76126842..76126896,+ | |||
|coexpression_cluster_id=C57 | |coexpression_cluster_id=C57 | ||
|description=CAGE_peak_1_at_TMC8_5end | |description=CAGE_peak_1_at_TMC8_5end | ||
|id=chr17:76126842..76126896,+ | |id=chr17:76126842..76126896,+ | ||
|ontology_enrichment_celltype=CL:0000542;1.56e-18;53!CL:0000084;1.22e-16;25!CL:0002087;5.08e-16;104!CL:0000791;1.33e-15;18!CL:0000789;1.33e-15;18!CL:0002419;1.33e-15;18!CL:0000763;5.29e-14;100!CL:0000945;7.10e-14;24!CL:0000738;2.13e-13;136!CL:0000766;2.22e-13;69!CL:0000576;2.80e-13;48!CL:0000473;5.94e-13;39!CL:0000234;5.94e-13;39!CL:0000988;8.94e-13;177!CL:0000860;2.09e-12;33!CL:0002057;2.09e-12;33!CL:0000625;3.90e-10;11!CL:0000236;8.30e-09;13 | |ontology_enrichment_celltype=CL:0000037!2.36e-75!172;CL:0000566!2.36e-75!172;CL:0002032!2.03e-70!165;CL:0000837!2.03e-70!165;CL:0000988!3.31e-68!182;CL:0000738!1.62e-58!140;CL:0002087!6.32e-50!119;CL:0002031!7.23e-50!124;CL:0000763!1.29e-37!112;CL:0000049!1.29e-37!112;CL:0000542!2.66e-29!53;CL:0000051!2.66e-29!53;CL:0000838!6.16e-29!52;CL:0000766!4.38e-25!76;CL:0000839!1.81e-21!70;CL:0000557!4.20e-21!71;CL:0002194!2.10e-18!63;CL:0000576!2.10e-18!63;CL:0000040!2.10e-18!63;CL:0000559!2.10e-18!63;CL:0002009!1.18e-17!65;CL:0002057!2.25e-16!42;CL:0000084!1.51e-15!25;CL:0000827!1.51e-15!25;CL:0000860!1.49e-14!45;CL:0000791!6.20e-14!18;CL:0000789!6.20e-14!18;CL:0002420!6.20e-14!18;CL:0002419!6.20e-14!18;CL:0000790!6.20e-14!18;CL:0000945!2.47e-12!24;CL:0000826!2.47e-12!24;CL:0000625!4.10e-09!11;CL:0000236!2.45e-08!14;CL:0000134!2.56e-08!358;CL:0002320!1.14e-07!365 | ||
| | |ontology_enrichment_celltype_v019=CL:0000542;1.56e-18;53!CL:0000084;1.22e-16;25!CL:0002087;5.08e-16;104!CL:0000791;1.33e-15;18!CL:0000789;1.33e-15;18!CL:0002419;1.33e-15;18!CL:0000763;5.29e-14;100!CL:0000945;7.10e-14;24!CL:0000738;2.13e-13;136!CL:0000766;2.22e-13;69!CL:0000576;2.80e-13;48!CL:0000473;5.94e-13;39!CL:0000234;5.94e-13;39!CL:0000988;8.94e-13;177!CL:0000860;2.09e-12;33!CL:0002057;2.09e-12;33!CL:0000625;3.90e-10;11!CL:0000236;8.30e-09;13 | ||
|ontology_enrichment_disease=DOID:8692;1.13e-13;31!DOID:1240;2.61e-13;39!DOID:2531;6.33e-11;51!DOID:0060083;6.33e-11;51 | |ontology_enrichment_celltype_v019_2=CL:0000037,1.58e-84,168;CL:0002032,6.10e-79,161;CL:0000837,6.10e-79,161;CL:0000988,1.36e-77,177;CL:0000738,3.09e-66,136;CL:0002087,9.41e-59,115;CL:0002031,5.27e-58,120;CL:0000763,1.80e-42,108;CL:0000049,1.80e-42,108;CL:0000542,3.17e-32,53;CL:0000051,3.17e-32,53;CL:0000838,8.27e-32,52;CL:0000766,7.64e-31,72;CL:0000839,1.37e-26,66;CL:0000557,1.28e-25,67;CL:0002194,5.09e-23,59;CL:0000576,5.09e-23,59;CL:0000040,5.09e-23,59;CL:0000559,5.09e-23,59;CL:0002009,1.47e-21,61;CL:0000473,2.71e-21,48;CL:0000234,2.71e-21,48;CL:0000860,2.25e-18,42;CL:0002057,2.25e-18,42;CL:0000084,1.38e-16,25;CL:0000827,1.38e-16,25;CL:0000791,1.33e-15,18;CL:0000789,1.33e-15,18;CL:0002420,1.33e-15,18;CL:0002419,1.33e-15,18;CL:0000790,1.33e-15,18;CL:0000945,8.68e-14,24;CL:0000826,8.68e-14,24;CL:0000134,3.54e-12,354;CL:0002320,2.63e-11,361;CL:0000625,3.91e-10,11;CL:0000236,2.97e-09,14;CL:0000219,8.47e-08,386 | ||
|ontology_enrichment_uberon=UBERON:0000178;2.25e-07;15!UBERON:0000179;2.25e-07;15!UBERON:0000463;2.25e-07;15 | |ontology_enrichment_development_v019=CL:0000051;1.56e-18;53!CL:0000790;1.33e-15;18!CL:0002057;1.91e-13;42!CL:0000049;2.89e-12;108 | ||
|ontology_enrichment_disease=DOID:2531!6.75e-17!51;DOID:0060083!6.75e-17!51;DOID:1240!6.41e-16!39;DOID:8692!3.26e-13!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.13e-13;31!DOID:1240;2.61e-13;39!DOID:2531;6.33e-11;51!DOID:0060083;6.33e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.71e-17,51;DOID:0060083,1.71e-17,51;DOID:1240,3.21e-17,39;DOID:8692,3.83e-14,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.95e-25!102;UBERON:0003061!3.95e-25!102;UBERON:0002193!1.44e-23!112;UBERON:0007023!1.17e-19!115;UBERON:0002371!2.48e-17!80;UBERON:0002405!2.25e-15!115;UBERON:0001474!1.14e-14!86;UBERON:0004765!3.80e-10!101;UBERON:0001434!3.80e-10!101;UBERON:0002384!6.29e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.25e-07;15!UBERON:0000179;2.25e-07;15!UBERON:0000463;2.25e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.90e-31,98;UBERON:0003061,3.90e-31,98;UBERON:0002193,1.70e-27,108;UBERON:0002371,1.31e-21,76;UBERON:0002405,2.53e-21,93;UBERON:0001474,2.73e-18,82;UBERON:0007023,2.07e-17,114;UBERON:0004765,1.15e-14,90;UBERON:0001434,5.47e-12,100;UBERON:0002384,2.28e-10,371;UBERON:0000178,2.28e-07,15;UBERON:0000179,2.28e-07,15;UBERON:0000463,2.28e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,2.79120467188971,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,49.8215405476642,41.4607976722226,44.9438561301109,52.7108130977531,63.7156800841373,52.0182174342015,0,0,0,48.8818035661703,41.0869081888648,62.8304940176573,59.8315041214428,70.3911010620197,78.1239134577066,24.4067866921518,22.6725566213286,26.272707898687,19.3379657576821,20.4053009591957,15.5253799160202,14.8754583619638,10.6903650885675,13.9367866902797,16.3984663623626,14.8573209786878,9.69577142543199,24.1321976515633,16.7826017731795,17.6054432572644,19.3889609728883,11.1891521523717,8.53949240891322,16.5285301880287,12.8371610830437,16.6227652707751,18.1418215102694,16.3560199249738,11.5080682643827,14.5104619314292,14.7520158419696,8.09668923694247,23.3661258688771,27.6385946762707,10.8594422352558,20.5835830895345,13.6262725315399,7.91155968602211,37.3921856772137,39.5443997934981,31.6584554717648,34.8218756554135,31.5371474967163,29.8949591256569,45.3170262548585,47.7400025277816,39.8207855206902,72.1584602291423,70.9980194640771,63.1551570243124,56.328389378779,52.4518743017176,78.7410842737642,67.4265770240559,69.6459240810816,118.396297574765,112.74954035922,112.006055840692,39.6513985737078,31.9489880899476,44.2485262422129,178.415761493247,200.828499764823,161.808379712614,128.733601450822,121.569005454329,157.184671503931,220.15420310094,114.084307850418,99.2821908190201,97.9179814059605,123.215758013082,134.239703072508,128.888813431839,160.162519083981,150.610759693287,127.803160809158,184.468484573603,230.620193813333,250.885257131944,123.960420911137,102.703092285315,137.107350747569,109.557526644445,125.833338658018,133.472108040566,82.6893278670085,116.695717285274,114.036070538587,134.925184676534,136.14691992531,90.3240796613151,142.535967459886,175.708208629764,155.251760962361,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,1.14185221401064,5.50112117090393,0,0,5.51730569212962,4.17911369518241,7.57860374957531,24.3260436791449,24.5957811635455,23.7732800850922,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.337834441449967,0,0,0,38.2163210564583,27.1446184903828,0,0,0,0,0,4.25602058638028,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.813357600086629,0.932949495138334,1.51392510525377,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,2.21446636387394,0,0,0,1.26755034821831,2.94848165003288,8.27105869353966,61.3633708186364,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0.144366447761074,0.462985512576611,0.380508304469197,0,0,37.6712019313718,13.1042388477973,32.1043310543653,0.93733833986777,0,0,0,0,0,7.8826118063351,135.242394644315,109.676573121068,155.07306987665,136.34182810049,0.190493682876507,0,0,0,0.925447434329912,1.8020583470635,0.571652865261156,0.112131084345361,0.87192013766656,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.6495122564762,46.7099095031878,37.9501091069457,0,0,0,0,0,0,102.782077042065,142.847301146397,151.154929976522,157.99027766037,0,0,0,0.167516265334349,0,44.9404214368309,47.865833472644,41.8559668570396,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17480694477644,0.343143423810856,122.199903438626,108.719957212583,141.093831416153,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.847168708148562,1.56869953835371,0,0,0,0,0.215915916102139,0,0,0,0,0,0,2.41185864310528,3.13722541229881,0.256450125116389,0.328014645699706,0.650756789328606,3.91555844261345,0,0,0,0,0,0,0,0,0,0,0,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5768229657955,0,0,0,0,0,1.47775344708365,0,0,0,0.192444225451024,5.3624182042863,0,5.36619664427641,0,0,0,0.689170200620878,112.653369249542,96.3442880999393,125.322381178316,97.4367961622357,95.8474096290833,128.397715616158,105.306130261432,141.17628138038,0.106824071127473,0,0,20.2525460887033,1.00988449083511,44.1079428760168,28.3778765457304,40.9137711437274,62.6222560332839,63.7137483998887,67.196741636833,83.1159647215838,102.020901527837,66.7456355993079,190.482202588451,60.4371646751724,6.42352300414798,40.7635408525916,61.321858227407,33.6635237860649,7.68101910771145,8.05233988412697,7.17451309361207,34.1929166953571,27.2838050417337,18.4631098421569,18.3909861363669,11.3244469119259,80.3625929000742,0,5.56731081233197,0,81.1307837540043,0,0.23874448473769,1.78178808499583,0,0,5.20476840718897,0,0.659215496907038,0,6.97367958878744,62.9927327411017,0,0.102268682502155,43.4489363277575,0,0.0898683511473268,0,50.6456646524603,4.53759665929895,122.136377096939,0,3.87733098438087,2.78304294485554,0,0,0,2.17499872630438,0,9.66163871112512,0,0,0,0,0.885741385813839,3.73848959738765,1.52581736317083,0.884634079449797,0.295547618953547,1.09692698576986,0,0,3.77056266668606,0,0,0,0,0.638002319463839,0.183195186803725,2.13213910407454,42.9211852422093,55.4140305074437,50.6945629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| ||
|short_description=p1@TMC8 | |short_description=p1@TMC8 | ||
}} | }} |
Latest revision as of 20:24, 17 September 2015
Short description: | p1@TMC8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMC8_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000301627, ENST00000318430, NM_152468, uc002jup.2, uc002juq.2, uc010dhh.1_5end |
EntrezGene: | TMC8 |
HGNC: | 20474 |
UniProt: | C9JFE2Q8IU68B3KXZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.90e-31 | 98 |
blood island | 3.90e-31 | 98 |
hemolymphoid system | 1.70e-27 | 108 |
bone marrow | 1.31e-21 | 76 |
immune system | 2.53e-21 | 93 |
bone element | 2.73e-18 | 82 |
adult organism | 2.07e-17 | 114 |
skeletal element | 1.15e-14 | 90 |
skeletal system | 5.47e-12 | 100 |
connective tissue | 2.28e-10 | 371 |
blood | 2.28e-07 | 15 |
haemolymphatic fluid | 2.28e-07 | 15 |
organism substance | 2.28e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.71e-17 | 51 |
immune system cancer | 1.71e-17 | 51 |
leukemia | 3.21e-17 | 39 |
myeloid leukemia | 3.83e-14 | 31 |