FFCP PHASE1:Hg19::chr15:47476275..47476332,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80031 | |EntrezGene=80031 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16770 | |HGNC=16770 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000558014_5end | |association_with_transcript=0bp_to_ENST00000558014_5end | ||
|cluster_id=chr15:47476275..47476332,+ | |||
|description=CAGE_peak_4_at_SEMA6D_5end | |description=CAGE_peak_4_at_SEMA6D_5end | ||
|id=chr15:47476275..47476332,+ | |id=chr15:47476275..47476332,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;3.53e-08;5!CL:0002618;5.35e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002618,4.34e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.25e-11;82!UBERON:0006241;7.95e-07;3!UBERON:0003057;7.95e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;8.81e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,8.58e-07,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;2.10e-39;22!UBERON:0001869;4.52e-39;32!UBERON:0003528;2.02e-37;34!UBERON:0002020;2.02e-37;34!UBERON:0002791;1.53e-36;32!UBERON:0001950;4.34e-36;20!UBERON:0001893;3.41e-35;34!UBERON:0000956;4.37e-34;25!UBERON:0000203;4.37e-34;25!UBERON:0002780;8.33e-32;41!UBERON:0001890;8.33e-32;41!UBERON:0000073;8.64e-23;53!UBERON:0002616;8.64e-23;53!UBERON:0001016;4.65e-18;83!UBERON:0001017;4.22e-17;75!UBERON:0000955;1.88e-16;68!UBERON:0000200;9.08e-12;6!UBERON:0002021;2.21e-11;5!UBERON:0000125;5.81e-11;9!UBERON:0002308;5.81e-11;9!UBERON:0001872;5.97e-11;5!UBERON:0001871;3.31e-10;6!UBERON:0000922;8.81e-10;49!UBERON:0000369;1.41e-09;4!UBERON:0002435;1.41e-09;4!UBERON:0000204;1.41e-09;4!UBERON:0011216;1.53e-09;132!UBERON:0000013;3.53e-08;5!UBERON:0002410;3.53e-08;5!UBERON:0002420;4.17e-08;9!UBERON:0007245;4.17e-08;9!UBERON:0010009;4.17e-08;9!UBERON:0010011;4.17e-08;9!UBERON:0000454;4.17e-08;9!UBERON:0009663;9.05e-08;7!UBERON:0005383;1.32e-07;3!UBERON:0005382;1.32e-07;3!UBERON:0002240;7.95e-07;3!UBERON:0005174;7.95e-07;3!UBERON:0001137;7.95e-07;3!UBERON:0000988;8.99e-07;3!UBERON:0001870;8.99e-07;3!UBERON:0007023;9.30e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.39e-52,89;UBERON:0001017,4.29e-47,81;UBERON:0001049,1.13e-46,56;UBERON:0005068,1.13e-46,56;UBERON:0006241,1.13e-46,56;UBERON:0007135,1.13e-46,56;UBERON:0002780,2.92e-44,41;UBERON:0001890,2.92e-44,41;UBERON:0003080,2.92e-44,41;UBERON:0006240,2.92e-44,41;UBERON:0003528,6.15e-44,34;UBERON:0002020,6.15e-44,34;UBERON:0001869,9.17e-44,32;UBERON:0000073,6.98e-42,53;UBERON:0002616,6.98e-42,53;UBERON:0001893,9.15e-41,34;UBERON:0002791,1.89e-40,32;UBERON:0002619,1.41e-39,22;UBERON:0000955,2.09e-38,68;UBERON:0006238,2.09e-38,68;UBERON:0001950,4.07e-36,20;UBERON:0000956,3.08e-34,25;UBERON:0000203,3.08e-34,25;UBERON:0003075,1.04e-31,82;UBERON:0007284,1.04e-31,82;UBERON:0002346,2.27e-31,86;UBERON:0003056,1.54e-30,61;UBERON:0004121,8.40e-29,171;UBERON:0000924,8.40e-29,171;UBERON:0006601,8.40e-29,171;UBERON:0010371,1.05e-25,104;UBERON:0011216,1.75e-24,223;UBERON:0010314,5.84e-23,132;UBERON:0007023,4.28e-18,114;UBERON:0000025,1.92e-12,192;UBERON:0000200,4.44e-12,6;UBERON:0002021,2.10e-11,5;UBERON:0000125,4.94e-11,9;UBERON:0002308,4.94e-11,9;UBERON:0001872,6.67e-11,5;UBERON:0004111,1.45e-10,240;UBERON:0001871,3.95e-10,6;UBERON:0000369,1.34e-09,4;UBERON:0002435,1.34e-09,4;UBERON:0000204,1.34e-09,4;UBERON:0010082,1.34e-09,4;UBERON:0000013,3.42e-08,5;UBERON:0002410,3.42e-08,5;UBERON:0002420,4.62e-08,9;UBERON:0007245,4.62e-08,9;UBERON:0010009,4.62e-08,9;UBERON:0010011,4.62e-08,9;UBERON:0000454,4.62e-08,9;UBERON:0009663,9.07e-08,7;UBERON:0005383,1.32e-07,3;UBERON:0005382,1.32e-07,3;UBERON:0005423,1.59e-07,581;UBERON:0002050,2.49e-07,564;UBERON:0000923,4.84e-07,560;UBERON:0010316,4.84e-07,560;UBERON:0005291,4.84e-07,560;UBERON:0006598,4.84e-07,560;UBERON:0010317,4.84e-07,560;UBERON:0002532,4.84e-07,560;UBERON:0000922,5.19e-07,592;UBERON:0000988,6.34e-07,3;UBERON:0001870,6.61e-07,3;UBERON:0000349,8.83e-07,5;UBERON:0002240,9.99e-07,3;UBERON:0005174,9.99e-07,3;UBERON:0001137,9.99e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861847406537515,0,0.313454721478088,0.572471974262113,0,0,0.0764134057479513,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.263504357079378,1.44076983047484,0,0,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0,0.838998872419812,0.550236083880135,0.208994966536811,1.55050055501597,2.13459757612026,2.67776490211736,0,0,0,0,0,3.83988831621543,1.57170560838319,4.50445921933289,0,3.79706263827252,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0.23486899728753,0,0.140450806702248,0,1.59684612505298,0,0,0,0,0,1.85169725349473,1.37630371859161,0.277064115484183,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86261773342101,1.18157981336281,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0.126995788584338,0,0,0,0.719792448923265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,11.712586847186,3.09315525111078,8.54332953205179,4.46557126157214,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.847168708148562,0.784349769176855,0,0.73886140225013,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0.328014645699706,0,0.515205058238611,0.27470839445503,0.41254749960294,0,0,0,0,0,0,0,0,0,0.170453254832202,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0.593929361665277,0,0,1.26602474769461,0,0,0.211125408127993,0.398495976502139,1.65770349318689,0,0,0,0,0,0,0,0.493217028184668,0,0,0,2.50473865036998,25.9497937401552,0,0,0,0.1137934482855,0,0,5.17115059862197,0,0,3.54296554325536,6.99459344027366,0,0.110579259931225,0.295547618953547,1.31631238292384,0,0,0.153900517007594,0.227884111694002,7.83917274919404,0,0.434589487688032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,11.5643240185443,5.18968543575312,6.16089502082187,0.337005664903385,0.802577647298789,1.87411556580271,0,2.15231080825299,0,0.394584402849391,1.20990716048664,23.2615298839173,0.505492637027904,0.150323419414493,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0.90392296312213,0,0,3.48209377757333,0,0,0,0,0,0,3.08870996151536,0,0.745515213392595,0,0,0,0,0,0.600420288709789,1.36905378891993,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,1.2764859772478,0,0,0,0,0,0,0,2.38568906942791,1.90684768556206,0,0,0,0,0,4.55621674935185,0,0,1.15400093896996,0,0,0,0,0,11.4420841944637,0,0,0,0,0,0,0,0.293104467356165,0,1.68067843270016,3.70251284879532,0,0,0.106787412567695,2.51526888159466,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.83039397352945,2.8793914062495,0,0.998361463831671,1.73869928235874,17.8469739067738,0,0.606596470166591,0,0,9.83503302194451,8.26049863081703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0,0,0,3.73297777609673,0,0.398594520940089,0.490696182767533,0,0,0,1.79988656269437,0.213383459388282,0,0,0,0,1.24415452006595,19.6957331807624,12.5076781220151,5.50430796495637,16.5998650051861,0,1.48802444071178,0.743614585554013,0.558644917973244,0,0,0.80057074828547,0,0,4.752962657138,4.25089728976755,4.46974805360024,2.87162909937057,15.8805168619682,3.52701987567511,2.26065903884592,1.42769420259154,0,0,0,0,0,0.690359926060101,0,0,0,0.781514011233092,0,0.655087670040387,0,2.566428215499,2.34323429584154,3.9270491335225,2.09272173639893,19.1441183156377,0,0,0.879356221798103,0,14.999651404592,12.1062139998777,3.64179362541979,0.91064876540519,0,0,0,2.7867590520501,2.17050152757402,0,0,0.235479278551542,5.49904564706007,0,3.65263488203798,0,0,0.428859265059938,1.26410889386181,0,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.971421986118279,6.31636551347685,0,0,0.11294608203896,20.1191145644135,0,0.231522474323834,0.655678681511872,0,0.735444965261716,0,1.17785080268967,1.48523200163543,13.9476390102522,0,0,0.193373663920732,0,0,0,0,2.19100916473955,0,0.143339583151451,0,2.03974470572744,21.3811838266785,5.81929524566941,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,1.28823786971007,3.48353369203032,0,0.827463966895162,0.213233981900981,0.714193294391221,0,0.186224142887574,1.34558235096736,0,1.0105859447911,0,1.02669990325584,0.134704106029175,0.286888821570705,0.665320713092027,0.732629417498771,0,0,0,2.34640942403454,0.3667243325485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| ||
|short_description=p4@SEMA6D | |short_description=p4@SEMA6D | ||
}} | }} |
Latest revision as of 21:14, 17 September 2015
Short description: | p4@SEMA6D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEMA6D_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000558014_5end |
EntrezGene: | SEMA6D |
HGNC: | 16770 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 4.34e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 8.58e-07 | 6 |