FFCP PHASE1:Hg19::chr10:29923893..29923907,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:29923893..29923907,- to FFCP PHASE1:Hg19::chr10:29923893..29923907,-: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6840 | |EntrezGene=6840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11480 | |HGNC=11480 | ||
|TSSclassifier=strong | |||
|UniProt=O95425,F5GY75,Q569J5 | |UniProt=O95425,F5GY75,Q569J5 | ||
|association_with_transcript=0bp_to_ENST00000355867,ENST00000535994,NM_021738,uc001iut.1_5end | |||
|cluster_id=chr10:29923893..29923907,- | |||
|coexpression_cluster_id=C72 | |||
|description=CAGE_peak_1_at_SVIL_5end | |||
|id=chr10:29923893..29923907,- | |||
|ontology_enrichment_celltype=CL:0000680!8.42e-13!57;CL:0000056!8.42e-13!57;CL:0000355!8.42e-13!57;CL:0000187!7.37e-12!54;CL:0000359!1.17e-11!32;CL:0000183!1.94e-11!59;CL:0000055!3.42e-11!180;CL:0000393!2.22e-10!60;CL:0000211!2.22e-10!60;CL:0000192!6.83e-09!42;CL:0000514!6.83e-09!42 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.51e-12;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.13e-12,32;CL:0000680,5.64e-10,58;CL:0000056,5.64e-10,58;CL:0000355,5.64e-10,58;CL:0000187,5.56e-09,55;CL:0000393,6.46e-08,61;CL:0000211,6.46e-08,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;5.97e-12;31!UBERON:0001015;5.97e-12;31!UBERON:0000383;5.97e-12;31!UBERON:0007100;5.54e-10;25!UBERON:0001134;2.42e-09;16!UBERON:0002036;2.42e-09;16!UBERON:0004573;6.37e-08;33!UBERON:0004571;6.37e-08;33!UBERON:0000948;7.64e-08;22!UBERON:0002204;5.10e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,2.02e-13,64;UBERON:0001015,2.02e-13,64;UBERON:0000383,2.02e-13,64;UBERON:0000926,2.16e-13,315;UBERON:0004120,2.16e-13,315;UBERON:0006603,2.16e-13,315;UBERON:0003077,7.51e-13,72;UBERON:0007285,7.51e-13,72;UBERON:0002329,9.71e-13,71;UBERON:0003059,9.71e-13,71;UBERON:0007282,9.71e-13,71;UBERON:0004290,9.71e-13,71;UBERON:0009618,9.71e-13,71;UBERON:0007524,2.04e-12,73;UBERON:0001134,2.20e-12,62;UBERON:0002036,2.20e-12,62;UBERON:0003082,2.20e-12,62;UBERON:0000486,3.12e-12,83;UBERON:0007503,7.95e-11,78;UBERON:0007100,1.07e-09,27;UBERON:0004872,1.29e-09,83;UBERON:0001637,1.88e-09,42;UBERON:0003509,1.88e-09,42;UBERON:0004572,1.88e-09,42;UBERON:0002204,2.53e-09,167;UBERON:0004573,4.70e-09,33;UBERON:0004571,4.70e-09,33;UBERON:0001009,4.93e-08,112;UBERON:0002050,6.80e-08,564;UBERON:0000948,1.26e-07,24;UBERON:0005498,1.26e-07,24;UBERON:0004140,1.26e-07,24;UBERON:0009881,1.26e-07,24;UBERON:0004141,1.26e-07,24;UBERON:0003084,1.26e-07,24;UBERON:0007005,1.26e-07,24;UBERON:0004139,1.26e-07,24;UBERON:0004291,1.26e-07,24;UBERON:0000923,1.37e-07,560;UBERON:0010316,1.37e-07,560;UBERON:0005291,1.37e-07,560;UBERON:0006598,1.37e-07,560;UBERON:0010317,1.37e-07,560;UBERON:0002532,1.37e-07,560;UBERON:0007500,2.68e-07,59;UBERON:0001981,2.68e-07,59;UBERON:0004537,2.68e-07,59;UBERON:0006965,2.68e-07,59;UBERON:0003104,4.86e-07,160;UBERON:0009142,4.86e-07,160;UBERON:0005256,7.16e-07,122;UBERON:0003133,7.28e-07,48;UBERON:0004535,7.66e-07,109;UBERON:0002049,8.15e-07,78;UBERON:0007798,8.15e-07,78;UBERON:0000922,9.46e-07,592 | |||
|phase1_expression=0,0.642301571672949,1.69145284915165,1.0007329835313,1.34088328328186,10.4680622892044,0,5.05375898741465,0.522371256399677,0,0,0.218441372130172,0.527533956456907,3.46545788288131,4.97096063591874,8.74022690387308,4.82155622419182,10.2243412654232,7.3189919818576,0.123121058076788,0,0,0.572471974262113,0.136874425072884,0,0.993374274723366,1.47781061009902,1.02324015707783,0,2.30297638858328,1.39334510984468,0,0.30120591877825,0,0,0,0,21.0518255242113,14.2386557703801,8.46342395791822,0,0,0,0,1.13362783106643,0,2.78914844286822,1.6446715520873,1.23882548358041,0,0.256160706529101,0.47296445977717,10.3423704220986,9.03678557017357,5.41705946377367,0.188242339542605,1.09162460023138,0.449446968890169,3.67300670845083,3.85114832491312,3.19668562899521,0,0.199463657621632,0,11.6083695451434,5.10646702222026,6.85104473895132,0.75374599577023,1.0429658368404,0.217188844705117,6.65939452896706,13.2579948955523,7.91155968602211,0.211255286311942,0,0,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,3.36305137788922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,9.75227465255847,0.670700859703636,0.383587685530591,2.1686349143074,4.51204119572301,1.59331170856906,5.5670016293577,0.973269740605272,0.189069634328136,0.665188192387692,0.790513071238134,11.395179568301,0,0.741568885568859,0,0,0,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0.516833518338658,0,0.66944122552934,1.20848795132744,0.760272105718513,0.732186172644509,0,0,0,0,0,0,0,0,1.31780417436063,0,0.436094052142534,2.98183171017191,13.4228342364455,67.3962730339284,16.3496873826824,4.965357350777,5.04609840128076,6.4049397437823,8.38669664618344,6.22422070799533,4.04132016209064,0.653847612453835,3.02714855289863,2.30470369792,1.40592859100278,7.80400192075801,1.71141546463335,5.67904986096844,1.05691048779388,1.61872944368132,0.702254033511242,6.94124182266637,1.96534907698829,6.30287265172169,1.18800285728205,0.989067717114227,0.910161361938026,0.718618141816238,1.17835279767846,0.375355559615893,4.71008996323111,0,0.919463387397059,2.55404700141215,0.680593098960126,0.358779271377724,1.70845911054854,3.81477422087211,0,0,0,0.744467425326359,2.53164498361899,1.75386609290158,1.00973509697646,1.74894807420369,30.8743968523931,3.19508633264953,2.01504196455281,2.7129694769678,1.35282597214308,1.36373060295417,1.72082757233402,0.487894824518382,0,0,1.0366105501537,0.252320850875628,0.36497735907583,0,2.57296375277154,1.38134921352481,6.03678306441573,20.2126254867484,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,2.80483547606892,0.4115740113314,0,0,0,0,0,0,1.54411029268673,5.92651541206578,1.1240175325762,0,0.833296006426766,3.25808305310325,5.19967392639789,0,0.579652024875384,3.99189560401794,3.46479474626577,1.38895653772983,1.33177906564219,0,0,0,0,0,0.93733833986777,2.51973192298289,1.70130116690864,3.58234090811393,3.48760726216754,2.68367875415648,0,0,1.24396869324463,0.288239906833923,0,0.063497894292169,0,0,0,0,0,0,2.01835951821649,2.61576041299968,3.30022286194275,46.9256328200733,3.57656445851882,0.845302752556,0,0,1.28603687131071,1.41849132023278,0.799266537048298,0.714889968290738,18.4491345833091,1.64648067356154,0.977208552881205,0.355391948742546,0.791951872933429,3.91871190177462,1.74306691720059,0.199945982364114,0,0,0,3.59437283237374,0,7.13184525203592,3.90909528002464,10.6847687726199,4.29746311775749,0,0.197030760201927,0,0.385029108839245,0.508189248444927,0,0,0,0,0,0,0,11.5330002215991,9.50323990013386,4.34024037919577,0.207970861530807,0.178428988797162,0.315404830067869,2.10854546986884,4.21324539618807,0,6.2083842775503,0,0.921845842708516,19.4619296408506,2.93701736194111,3.0882908142977,0.620304078368662,0.862856803274467,2.34800627167578,0,0,0.604780586659361,0.744323423456331,1.53461973288062,0.280660094433074,2.94720043288112,1.53512174720011,0.482561763430822,1.48418066444991,0.308419387605311,4.97172830876756,2.38168752440047,2.59627214591811,2.20799719073923,0.241718899183244,3.40860999515584,0.552485933615378,0.34444334449382,0.728364672026868,1.83574180943194,0,0.0770153371044148,0,0,0.949964660035881,0,1.36074964221213,1.0795795805107,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,3.709476419318,0.732555718546747,0.247528499761764,0.574265537996172,1.95018073810956,16.068392984416,5.02687735119034,4.77550713055398,2.91656981979646,4.27293374702045,14.3943128123487,5.075584286998,5.62495740946266,23.4154253750919,2.97512847649761,0.576570202095319,4.08360679982669,0.50578890427775,3.71876439437829,9.75918275174984,3.485186350803,14.1695446881001,10.6461206063404,5.21959795245044,18.532421910392,18.7493601632009,4.09374206295634,3.16379424718726,1.33441135746677,0,0.42793898803392,10.8189104294818,6.27958912159384,0.899362287916574,0.274537029736055,0.706874414074119,9.70475911551917,6.34041284692033,0.421258456238981,0,8.77368562672624,7.39551027297288,0.9554993798559,0.8484325917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| ||
|short_description=p1@SVIL | |||
}} | }} |
Latest revision as of 21:15, 17 September 2015
Short description: | p1@SVIL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SVIL_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | 0bp_to_ENST00000355867, ENST00000535994, NM_021738, uc001iut.1_5end |
EntrezGene: | SVIL |
HGNC: | 11480 |
UniProt: | O95425F5GY75Q569J5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.13e-12 | 32 |
muscle precursor cell | 5.64e-10 | 58 |
myoblast | 5.64e-10 | 58 |
multi-potent skeletal muscle stem cell | 5.64e-10 | 58 |
muscle cell | 5.56e-09 | 55 |
electrically responsive cell | 6.46e-08 | 61 |
electrically active cell | 6.46e-08 | 61 |