FFCP PHASE1:Hg19::chr1:158985493..158985535,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3428 | |EntrezGene=3428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5395 | |HGNC=5395 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENST00000474473_5end | |association_with_transcript=30bp_to_ENST00000474473_5end | ||
|cluster_id=chr1:158985493..158985535,+ | |||
|coexpression_cluster_id=C1841 | |||
|description=CAGE_peak_4_at_IFI16_5end | |description=CAGE_peak_4_at_IFI16_5end | ||
|id=chr1:158985493..158985535,+ | |id=chr1:158985493..158985535,+ | ||
|ontology_enrichment_celltype=CL:0000766!3.89e-17!76;CL:0000839!1.37e-16!70;CL:0000557!3.12e-16!71;CL:0002194!3.52e-15!63;CL:0000576!3.52e-15!63;CL:0000040!3.52e-15!63;CL:0000559!3.52e-15!63;CL:0002009!3.93e-14!65;CL:0002057!7.95e-14!42;CL:0000860!3.74e-13!45;CL:0000763!5.86e-12!112;CL:0000049!5.86e-12!112;CL:0000048!8.07e-07!430 | |ontology_enrichment_celltype=CL:0000766!3.89e-17!76;CL:0000839!1.37e-16!70;CL:0000557!3.12e-16!71;CL:0002194!3.52e-15!63;CL:0000576!3.52e-15!63;CL:0000040!3.52e-15!63;CL:0000559!3.52e-15!63;CL:0002009!3.93e-14!65;CL:0002057!7.95e-14!42;CL:0000860!3.74e-13!45;CL:0000763!5.86e-12!112;CL:0000049!5.86e-12!112;CL:0000048!8.07e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.67e-17;33!CL:0002057;4.67e-17;33!CL:0000473;1.83e-16;39!CL:0000234;1.83e-16;39!CL:0000576;9.50e-09;48!CL:0000766;4.69e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,1.86e-17,66;CL:0000766,1.97e-17,72;CL:0000557,6.80e-17,67;CL:0002194,3.42e-15,59;CL:0000576,3.42e-15,59;CL:0000040,3.42e-15,59;CL:0000559,3.42e-15,59;CL:0000473,9.73e-15,48;CL:0000234,9.73e-15,48;CL:0002009,4.04e-14,61;CL:0000860,1.75e-12,42;CL:0002057,1.75e-12,42;CL:0000763,2.24e-12,108;CL:0000049,2.24e-12,108;CL:0000219,2.07e-07,386;CL:0000134,5.79e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;9.73e-10;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.18e-15!80;UBERON:0001474!3.97e-14!86;UBERON:0004765!3.07e-12!101;UBERON:0001434!3.07e-12!101;UBERON:0002193!5.53e-12!112;UBERON:0002390!6.40e-12!102;UBERON:0003061!6.40e-12!102;UBERON:0002405!2.28e-11!115;UBERON:0002204!5.96e-08!167;UBERON:0003081!9.57e-08!216 | |ontology_enrichment_uberon=UBERON:0002371!1.18e-15!80;UBERON:0001474!3.97e-14!86;UBERON:0004765!3.07e-12!101;UBERON:0001434!3.07e-12!101;UBERON:0002193!5.53e-12!112;UBERON:0002390!6.40e-12!102;UBERON:0003061!6.40e-12!102;UBERON:0002405!2.28e-11!115;UBERON:0002204!5.96e-08!167;UBERON:0003081!9.57e-08!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.67e-16,76;UBERON:0001474,3.32e-15,82;UBERON:0002405,1.46e-14,93;UBERON:0004765,7.87e-14,90;UBERON:0001434,4.29e-11,100;UBERON:0002193,9.54e-11,108;UBERON:0002390,1.56e-10,98;UBERON:0003061,1.56e-10,98;UBERON:0003081,8.97e-09,203;UBERON:0000926,5.52e-07,315;UBERON:0004120,5.52e-07,315;UBERON:0006603,5.52e-07,315 | |||
|phase1_expression=7.44881355009282,2.99740733447376,3.10099689011137,1.0007329835313,1.34088328328186,0,0,5.05375898741465,1.04474251279935,0,0,0,0.263766978228454,0.247532705920093,0,4.03395087871065,3.01347264011988,3.65155045193687,2.43966399395253,0,0,0,0,0,0,0.534893840235659,1.64201178899891,1.33808328233255,0.786728553697808,1.53531759238885,0.309632246632152,0,0,0,0,0,0.587200878669695,0.553995408531877,0.601633342410425,0.868043482863407,5.37397138175818,6.47787332037959,1.03030227053675,4.36194716338694,7.17964293008738,2.66842467306598,3.71886459049095,3.70051099219643,11.1494293522237,94.0754122893432,52.2567841319365,145.200089151591,16.2030469946211,12.9096936716765,31.1480919166986,3.76484679085209,4.63940455098338,6.06753408001728,8.26426509401437,12.5162320559677,5.11469700639233,81.1434198459322,51.8605509816243,55.8354423197829,9.57690487474327,9.07816359505824,14.9477339758938,99.2432227764136,62.056467292004,205.677835935745,7.87019353423379,18.0456041633907,21.835904733421,1.47878700418359,0.212604299965044,0.209658645508376,0.22465726229299,0.750884464207532,0.803627933485401,0.285012743741249,0.59675003159727,0.547992461293902,1.75996244461323,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0,0,0,1.68152568894461,0.526768169550154,0,0.786021525498329,0.411202997999018,2.00623794468814,0,0,0,1.78256731016278,0.294605907474837,0.664601683750863,0.541607727530031,2.94610035369053,2.47112760363769,0.493313713811028,1.10540007114339,0.869409257205157,0,0.535081656179426,0,0.566546713487831,0,0,0,0,0,0,0.150575119077773,0,0,0,0,1.20964045934839,0.267440195783507,0.724122019413995,2.43806866313962,2.68280343881454,0.12786256184353,0,0,0.434539556882471,3.9764297352555,0,0,0,0.087834785693126,0,0,0,1.29818957461873,2.78607579678828,9.70593111787716,0,0,0,1.59009925893364,0,1.04142150482278,2.26123176769604,5.03399323451887,2.20094433552054,2.50793959844173,25.0664256394249,43.4034840477786,16.7360306382335,0.402829317109147,0,0,2.57364156242108,2.43042584364528,4.01848777278359,2.91888184414021,2.13961812918312,1.53316637465883,0,1.09921046358244,0,3.87780264148325,0,0,2.91250176828533,27.2762912475231,3.72887606973458,2.4826786753885,1.12135520028461,1.06748995729705,2.22000793575444,13.6932855575897,1.75123873690594,5.5577047058576,0,0,0.234321431833797,7.49184184392769,2.85235910772225,2.24173020827702,0.117434498643765,0,0.421352420106746,3.26646674007829,0.61417158655884,1.23990937410919,0,0.741800787835671,0,0,0.336672227908132,0.125118519871964,5.54128230968366,0,0.919463387397059,0.600952235626387,1.92834711372036,0.179389635688862,0.213557388818567,1.05965950579781,0.300091096084402,0.721367704669072,0,0.37223371266318,0.506328996723799,0.487185025805993,0,0.368199594569197,0,0,0.10075209822764,0.169560592310488,4.25173876959253,1.63647672354501,3.44165514466805,0,0,0,0,0,0,0,0,0,1.85747171212792,5.0531563716871,0.709840800239063,1.18009283054671,1.44606617930089,0.661763836394364,1.52515610864684,1.18635309555548,1.34831308160164,1.17732879075208,1.53898862778556,1.4763109092493,1.40241773803446,0,0,0,0,1.18157981336281,0,0.491953754172454,0.686271241194102,1.64625428112938,0,0.100528972411631,0.185176890317059,0.325808305310325,0,0,0.115930404975077,0.587043471179108,1.01056513432752,0.925971025153221,2.28304982681518,0,0,56.6299114001014,22.9324179836453,10.404181360211,4.68669169933885,1.6798212819886,1.13420077793909,0.0895585227028483,0,0,271.457444080665,52.212721369843,52.4540132318153,44.1007057455902,39.5138816624569,33.3998923976809,6.11181480893244,3.51652341630141,1.71072446022705,16.8637088033451,16.2185251235715,24.5810732062297,1.12131084345361,0.43596006883328,1.7601188597028,6.59285750364667,3.57656445851882,0.845302752556,2.6593811658487,0,0,0,0,1.14382394926518,0,0,1.62868092146868,0.355391948742546,0.791951872933429,13.866211344741,4.35766729300147,3.09916272664377,4.86495122564762,3.51579964002488,0,1.67737398844108,0,2.85273810081437,3.32997005335432,2.05476322550383,4.47652408099739,6.38885320763105,1.37921532141349,0.862510299438069,1.79680250791648,0.254094624222463,0,0,0.335032530668698,0.637938751653163,2.24702107184155,0,1.65766205374414,0,0,0,1.45579603071565,0.535286966391485,1.10391690523754,0.234282829985426,0.601892199455438,0,1.03473071292505,1.32845119707087,0.184369168541703,2.69339204851057,0,0,0.206768026122887,0,0.106727557803444,0,1.66435439510497,0,3.72161711728165,0.767309866440312,1.12264037773229,6.27881831352935,3.07024349440022,2.41280881715411,0,0.462629081407967,3.19611105563629,3.94210348866284,6.23105315020345,1.97557643381931,0,3.80962293576241,0.0920809889358963,0.34444334449382,0.364182336013434,1.70461739447251,0,0.231046011313244,0,0,0.211103257785751,1.13733384070897,0.850468526382578,0.647747748306418,1.54227252690289,0,0,0.254876273045038,0,0,0,0,1.02580050046556,0,0.650756789328606,2.26690225624989,0,0.082509499920588,1.14853107599234,0.650060246036521,0,0.096670718292122,0.462145851343933,0.460511024178389,0.1378365724845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|phase1_expression=7.44881355009282,2.99740733447376,3.10099689011137,1.0007329835313,1.34088328328186,0,0,5.05375898741465,1.04474251279935,0,0,0,0.263766978228454,0.247532705920093,0,4.03395087871065,3.01347264011988,3.65155045193687,2.43966399395253,0,0,0,0,0,0,0.534893840235659,1.64201178899891,1.33808328233255,0.786728553697808,1.53531759238885,0.309632246632152,0,0,0,0,0,0.587200878669695,0.553995408531877,0.601633342410425,0.868043482863407,5.37397138175818,6.47787332037959,1.03030227053675,4.36194716338694,7.17964293008738,2.66842467306598,3.71886459049095,3.70051099219643,11.1494293522237,94.0754122893432,52.2567841319365,145.200089151591,16.2030469946211,12.9096936716765,31.1480919166986,3.76484679085209,4.63940455098338,6.06753408001728,8.26426509401437,12.5162320559677,5.11469700639233,81.1434198459322,51.8605509816243,55.8354423197829,9.57690487474327,9.07816359505824,14.9477339758938,99.2432227764136,62.056467292004,205.677835935745,7.87019353423379,18.0456041633907,21.835904733421,1.47878700418359,0.212604299965044,0.209658645508376,0.22465726229299,0.750884464207532,0.803627933485401,0.285012743741249,0.59675003159727,0.547992461293902,1.75996244461323,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0,0,0,1.68152568894461,0.526768169550154,0,0.786021525498329,0.411202997999018,2.00623794468814,0,0,0,1.78256731016278,0.294605907474837,0.664601683750863,0.541607727530031,2.94610035369053,2.47112760363769,0.493313713811028,1.10540007114339,0.869409257205157,0,0.535081656179426,0,0.566546713487831,0,0,0,0,0,0,0.150575119077773,0,0,0,0,1.20964045934839,0.267440195783507,0.724122019413995,2.43806866313962,2.68280343881454,0.12786256184353,0,0,0.434539556882471,3.9764297352555,0,0,0,0.087834785693126,0,0,0,1.29818957461873,2.78607579678828,9.70593111787716,0,0,0,1.59009925893364,0,1.04142150482278,2.26123176769604,5.03399323451887,2.20094433552054,2.50793959844173,25.0664256394249,43.4034840477786,16.7360306382335,0.402829317109147,0,0,2.57364156242108,2.43042584364528,4.01848777278359,2.91888184414021,2.13961812918312,1.53316637465883,0,1.09921046358244,0,3.87780264148325,0,0,2.91250176828533,27.2762912475231,3.72887606973458,2.4826786753885,1.12135520028461,1.06748995729705,2.22000793575444,13.6932855575897,1.75123873690594,5.5577047058576,0,0,0.234321431833797,7.49184184392769,2.85235910772225,2.24173020827702,0.117434498643765,0,0.421352420106746,3.26646674007829,0.61417158655884,1.23990937410919,0,0.741800787835671,0,0,0.336672227908132,0.125118519871964,5.54128230968366,0,0.919463387397059,0.600952235626387,1.92834711372036,0.179389635688862,0.213557388818567,1.05965950579781,0.300091096084402,0.721367704669072,0,0.37223371266318,0.506328996723799,0.487185025805993,0,0.368199594569197,0,0,0.10075209822764,0.169560592310488,4.25173876959253,1.63647672354501,3.44165514466805,0,0,0,0,0,0,0,0,0,1.85747171212792,5.0531563716871,0.709840800239063,1.18009283054671,1.44606617930089,0.661763836394364,1.52515610864684,1.18635309555548,1.34831308160164,1.17732879075208,1.53898862778556,1.4763109092493,1.40241773803446,0,0,0,0,1.18157981336281,0,0.491953754172454,0.686271241194102,1.64625428112938,0,0.100528972411631,0.185176890317059,0.325808305310325,0,0,0.115930404975077,0.587043471179108,1.01056513432752,0.925971025153221,2.28304982681518,0,0,56.6299114001014,22.9324179836453,10.404181360211,4.68669169933885,1.6798212819886,1.13420077793909,0.0895585227028483,0,0,271.457444080665,52.212721369843,52.4540132318153,44.1007057455902,39.5138816624569,33.3998923976809,6.11181480893244,3.51652341630141,1.71072446022705,16.8637088033451,16.2185251235715,24.5810732062297,1.12131084345361,0.43596006883328,1.7601188597028,6.59285750364667,3.57656445851882,0.845302752556,2.6593811658487,0,0,0,0,1.14382394926518,0,0,1.62868092146868,0.355391948742546,0.791951872933429,13.866211344741,4.35766729300147,3.09916272664377,4.86495122564762,3.51579964002488,0,1.67737398844108,0,2.85273810081437,3.32997005335432,2.05476322550383,4.47652408099739,6.38885320763105,1.37921532141349,0.862510299438069,1.79680250791648,0.254094624222463,0,0,0.335032530668698,0.637938751653163,2.24702107184155,0,1.65766205374414,0,0,0,1.45579603071565,0.535286966391485,1.10391690523754,0.234282829985426,0.601892199455438,0,1.03473071292505,1.32845119707087,0.184369168541703,2.69339204851057,0,0,0.206768026122887,0,0.106727557803444,0,1.66435439510497,0,3.72161711728165,0.767309866440312,1.12264037773229,6.27881831352935,3.07024349440022,2.41280881715411,0,0.462629081407967,3.19611105563629,3.94210348866284,6.23105315020345,1.97557643381931,0,3.80962293576241,0.0920809889358963,0.34444334449382,0.364182336013434,1.70461739447251,0,0.231046011313244,0,0,0.211103257785751,1.13733384070897,0.850468526382578,0.647747748306418,1.54227252690289,0,0,0.254876273045038,0,0,0,0,1.02580050046556,0,0.650756789328606,2.26690225624989,0,0.082509499920588,1.14853107599234,0.650060246036521,0,0.096670718292122,0.462145851343933,0.460511024178389,0.1378365724845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| ||
|short_description=p4@IFI16 | |short_description=p4@IFI16 | ||
}} | }} |
Latest revision as of 22:04, 17 September 2015
Short description: | p4@IFI16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IFI16_5end |
Coexpression cluster: | C1841_melanoma_Mast_schwannoma_CD14_extraskeletal_Macrophage_giant |
Association with transcript: | 30bp_to_ENST00000474473_5end |
EntrezGene: | IFI16 |
HGNC: | 5395 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 1.86e-17 | 66 |
myeloid leukocyte | 1.97e-17 | 72 |
granulocyte monocyte progenitor cell | 6.80e-17 | 67 |
monopoietic cell | 3.42e-15 | 59 |
monocyte | 3.42e-15 | 59 |
monoblast | 3.42e-15 | 59 |
promonocyte | 3.42e-15 | 59 |
defensive cell | 9.73e-15 | 48 |
phagocyte | 9.73e-15 | 48 |
macrophage dendritic cell progenitor | 4.04e-14 | 61 |
classical monocyte | 1.75e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.75e-12 | 42 |
myeloid cell | 2.24e-12 | 108 |
common myeloid progenitor | 2.24e-12 | 108 |
motile cell | 2.07e-07 | 386 |
mesenchymal cell | 5.79e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.67e-16 | 76 |
bone element | 3.32e-15 | 82 |
immune system | 1.46e-14 | 93 |
skeletal element | 7.87e-14 | 90 |
skeletal system | 4.29e-11 | 100 |
hemolymphoid system | 9.54e-11 | 108 |
hematopoietic system | 1.56e-10 | 98 |
blood island | 1.56e-10 | 98 |
lateral plate mesoderm | 8.97e-09 | 203 |
mesoderm | 5.52e-07 | 315 |
mesoderm-derived structure | 5.52e-07 | 315 |
presumptive mesoderm | 5.52e-07 | 315 |