FFCP PHASE1:Hg19::chr3:32525474..32525488,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54918 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=19177 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-427bp_to_AK172793_5end | |||
|cluster_id=chr3:32525474..32525488,- | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_2_at_CMTM6_5end | |||
|id=chr3:32525474..32525488,- | |||
|ontology_enrichment_celltype=CL:0002057!2.31e-24!42;CL:0000860!4.09e-23!45;CL:0002009!8.83e-21!65;CL:0000766!5.77e-20!76;CL:0002194!6.96e-20!63;CL:0000576!6.96e-20!63;CL:0000040!6.96e-20!63;CL:0000559!6.96e-20!63;CL:0000557!3.30e-19!71;CL:0000839!1.31e-17!70;CL:0000763!1.39e-16!112;CL:0000049!1.39e-16!112;CL:0000738!8.04e-16!140;CL:0002087!3.64e-14!119;CL:0002320!7.61e-14!365;CL:0000134!8.12e-14!358;CL:0002031!8.40e-14!124;CL:0002032!9.72e-14!165;CL:0000837!9.72e-14!165;CL:0000037!3.53e-13!172;CL:0000566!3.53e-13!172;CL:0000988!3.76e-12!182;CL:0000048!1.93e-11!430;CL:0000034!2.22e-11!444;CL:0000723!2.62e-11!436;CL:0000219!3.00e-11!390;CL:0002371!9.33e-09!591;CL:0000063!2.51e-08!578;CL:0000144!1.46e-07!625;CL:0000003!1.72e-07!722;CL:0000548!6.71e-07!679;CL:0000004!6.71e-07!679;CL:0000255!6.71e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.61e-45;33!CL:0002057;1.61e-45;33!CL:0000473;1.91e-37;39!CL:0000234;1.91e-37;39!CL:0000576;1.21e-27;48!CL:0000766;1.81e-17;69!CL:0000763;3.06e-09;100!CL:0000738;5.71e-09;136!CL:0000990;1.72e-08;8!CL:0002087;6.14e-08;104!CL:0000451;9.96e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.08e-53,48;CL:0000234,5.08e-53,48;CL:0000860,1.03e-52,42;CL:0002057,1.03e-52,42;CL:0002009,5.70e-47,61;CL:0002194,1.92e-46,59;CL:0000576,1.92e-46,59;CL:0000040,1.92e-46,59;CL:0000559,1.92e-46,59;CL:0000766,6.75e-42,72;CL:0000557,1.63e-41,67;CL:0000839,4.52e-40,66;CL:0000763,1.35e-31,108;CL:0000049,1.35e-31,108;CL:0000738,1.54e-26,136;CL:0002087,3.34e-24,115;CL:0002031,8.54e-23,120;CL:0002032,7.22e-21,161;CL:0000837,7.22e-21,161;CL:0000037,3.53e-20,168;CL:0000988,2.62e-18,177;CL:0002320,4.29e-13,361;CL:0000134,1.71e-12,354;CL:0000048,8.49e-12,427;CL:0000723,2.58e-11,433;CL:0000034,1.07e-10,441;CL:0000219,1.32e-09,386;CL:0000990,6.28e-09,8;CL:0000451,4.50e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.41e-38;42!CL:0000049;1.67e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!7.60e-18!101;UBERON:0001434!7.60e-18!101;UBERON:0002371!4.64e-16!80;UBERON:0001474!3.53e-15!86;UBERON:0002390!1.28e-14!102;UBERON:0003061!1.28e-14!102;UBERON:0002384!1.82e-13!375;UBERON:0002193!8.82e-12!112;UBERON:0002405!3.54e-11!115;UBERON:0002204!5.64e-11!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.02e-35,76;UBERON:0004765,5.84e-32,90;UBERON:0001434,2.04e-31,100;UBERON:0001474,2.24e-31,82;UBERON:0002390,7.20e-30,98;UBERON:0003061,7.20e-30,98;UBERON:0002405,4.81e-26,93;UBERON:0002193,9.83e-26,108;UBERON:0002204,1.39e-20,167;UBERON:0002384,3.66e-12,371;UBERON:0000926,1.04e-11,315;UBERON:0004120,1.04e-11,315;UBERON:0006603,1.04e-11,315;UBERON:0003081,1.25e-11,203 | |||
|phase1_expression=0.54503513781167,1.07050261945492,0.563817616383885,1.0007329835313,0.893922188854576,1.74467704820074,0,0,0.261185628199839,0,0,0.218441372130172,0,0.247532705920093,2.31978163009541,1.34465029290355,0.602694528023977,0.730310090387373,1.95173119516203,0,0.408001382488506,0,0,0.136874425072884,0,0.61130724598361,0.738905305049512,0.472264687882075,0.786728553697808,1.15148819429164,0.77408061658038,0.919421224478927,0.6024118375565,0.739508020333575,0.0774672005803016,0.284338464974843,0.293600439334847,0,1.40381113229099,0.868043482863407,0,0,0.257575567634187,6.68831898385998,4.91238726795452,2.42584061187816,4.41615170120801,2.05583944010913,4.02618282163635,5.75384784644301,2.30544635876191,5.43909128743746,4.13694816883942,5.16387746867061,2.70852973188684,5.45902784673554,3.27487380069415,2.69668181334102,5.20342617030534,2.56743221660875,5.11469700639233,1.9791078011203,2.79249120670285,3.83602275479425,6.96502172708602,3.40431134814684,1.24564449799115,4.01997864410789,4.69334626578181,5.42972111762792,4.84319602106695,3.31449872388808,7.91155968602211,1.47878700418359,2.76385589954557,1.04829322754188,1.12328631146495,0.750884464207532,0.64290234678832,0.855038231223746,1.79025009479181,1.27864907635244,0,0.546138611262131,0,0.426730222566507,0,0,0,0,1.70763890732835,1.76171156811282,1.14681968437569,0,0,0.263384084775077,0,0.393010762749165,0.411202997999018,1.33749196312542,0,0.473447805734733,0,1.44833593950726,0,0.664601683750863,0,3.71464827204458,3.38154303655683,0.164437904603676,0.276350017785848,0,0,0.267540828089713,0,0.793165398882963,0,0,0.253019692019503,0.318565414324097,0,1.90090408889675,0.451725357233318,0.639933055772092,0,0.236777252044017,0,0.201606743224732,0.802320587350522,0.144824403882799,0,0.670700859703636,0.12786256184353,0,0,0.579386075843295,0,0,0.0945348171640679,0.886917589850256,0.351339142772504,0.130979075497713,0.364295288292542,0.741568885568859,1.9472843619281,1.21890816109487,1.86141144726411,0,0,0,0,0,0,0,0,1.10047216776027,0,0.258416759169329,0,0,0,0,0.24406205754817,0.367663080345869,0,0.803697554556718,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0.993943903390637,0.379891534993739,0,0.286836620748814,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0.808264032418128,0.817309515567294,0.151357427644931,0,0,0.936480230490962,0,1.19558944441441,0.939475989150119,0.647491777472526,0.702254033511242,0,0.491337269247072,0.516628905878827,2.37600571456411,1.23633464639278,0,0,0.168336113954066,1.25118519871964,0.277064115484183,0.438977620880838,0.612975591598039,0.45071417671979,0.453728732640084,0.717558542755448,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0,0.292311015483596,0,0.0920498986422993,0.323292113637624,0.710019185033229,0.302256294682921,0,0,0,0.286804595389004,0.243947412259191,0.265059536642971,0.580969714347592,0.310983165046111,0.504641701751257,0,1.56449532329816,0,0,0.464367928031979,0.721879481669586,0,0.168584690078102,0.241011029883482,0.110293972732394,0.435758888184812,0,0.134831308160164,0.392442930250692,0,0,0,0.4115740113314,0,2.53510069643662,0.982827216677626,0.590789906681404,0,0.491953754172454,0.343135620597051,0.439001141634502,0,0.402115889646523,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0.790204397959275,0,0.246217006087397,0.702012795417713,2.52672975890838,0.93733833986777,1.00789276919316,0.567100388969546,0.268675568108545,0.290633938513962,0,0.985326475791887,0.264145302039678,0,0.288239906833923,0.25248486685276,0.190493682876507,0,0,0,0.308482478109971,0.300343057843917,0.857479297891735,0.112131084345361,0.43596006883328,0.1466765716419,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0.285955987316295,0,0,0,0.710783897485092,1.58390374586686,0,0,0.299918973546171,0,2.51128545716063,2.10833939483032,0.479249710983165,0,0,0.723906533337896,1.2328579353023,0.179060963239896,0.784596007954691,0.394061520403854,0.646882724578552,0.513372145118994,0,0,0,0,1.27587750330633,5.24304916763028,17.9496875522415,0.414415513436035,0,2.00068208423871,0,1.03985430765404,0.713715955188647,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0,0.260650843404249,0,0.343143423810856,0.206768026122887,1.07857100409308,0.640365346820666,0.303127571446259,0,0.907170879989041,0,0.153461973288062,1.40330047216537,0.512556597022804,1.02341449813341,0.321707842287215,1.48418066444991,1.3878872442239,0.177561725313127,0.164254312027618,4.67328986265259,0.581051892299796,0,1.00253235151642,1.10497186723076,0.803701137152247,1.27463817604702,0.655622074797121,0,0.616122696835318,0,0,0.316654886678627,0,0.850468526382578,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.103041011647722,0.27470839445503,0.330037999682352,0,0,0,0,0.154048617114644,0.460511024178389,0.413509717453592,0.429680979473094,0.145016693914229,0.0852266274161009,0,0.330569830721956,0.576570202095319,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| |||
|short_description=p2@CMTM6 | |||
}} |
Latest revision as of 23:13, 17 September 2015
Short description: | p2@CMTM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CMTM6_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | -427bp_to_AK172793_5end |
EntrezGene: | CMTM6 |
HGNC: | 19177 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.08e-53 | 48 |
phagocyte | 5.08e-53 | 48 |
classical monocyte | 1.03e-52 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.03e-52 | 42 |
macrophage dendritic cell progenitor | 5.70e-47 | 61 |
monopoietic cell | 1.92e-46 | 59 |
monocyte | 1.92e-46 | 59 |
monoblast | 1.92e-46 | 59 |
promonocyte | 1.92e-46 | 59 |
myeloid leukocyte | 6.75e-42 | 72 |
granulocyte monocyte progenitor cell | 1.63e-41 | 67 |
myeloid lineage restricted progenitor cell | 4.52e-40 | 66 |
myeloid cell | 1.35e-31 | 108 |
common myeloid progenitor | 1.35e-31 | 108 |
leukocyte | 1.54e-26 | 136 |
nongranular leukocyte | 3.34e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 8.54e-23 | 120 |
hematopoietic oligopotent progenitor cell | 7.22e-21 | 161 |
hematopoietic multipotent progenitor cell | 7.22e-21 | 161 |
hematopoietic stem cell | 3.53e-20 | 168 |
hematopoietic cell | 2.62e-18 | 177 |
connective tissue cell | 4.29e-13 | 361 |
mesenchymal cell | 1.71e-12 | 354 |
multi fate stem cell | 8.49e-12 | 427 |
somatic stem cell | 2.58e-11 | 433 |
stem cell | 1.07e-10 | 441 |
motile cell | 1.32e-09 | 386 |
conventional dendritic cell | 6.28e-09 | 8 |
dendritic cell | 4.50e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.02e-35 | 76 |
skeletal element | 5.84e-32 | 90 |
skeletal system | 2.04e-31 | 100 |
bone element | 2.24e-31 | 82 |
hematopoietic system | 7.20e-30 | 98 |
blood island | 7.20e-30 | 98 |
immune system | 4.81e-26 | 93 |
hemolymphoid system | 9.83e-26 | 108 |
musculoskeletal system | 1.39e-20 | 167 |
connective tissue | 3.66e-12 | 371 |
mesoderm | 1.04e-11 | 315 |
mesoderm-derived structure | 1.04e-11 | 315 |
presumptive mesoderm | 1.04e-11 | 315 |
lateral plate mesoderm | 1.25e-11 | 203 |