FFCP PHASE1:Hg19::chr3:32544275..32544350,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:32544275..32544350,- to FFCP PHASE1:Hg19::chr3:32544275..32544350,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54918 | |EntrezGene=54918 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19177 | |HGNC=19177 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000495177_5end | |||
|cluster_id=chr3:32544275..32544350,- | |||
|coexpression_cluster_id=C1246 | |||
|description=CAGE_peak_1_at_CMTM6_5end | |||
|id=chr3:32544275..32544350,- | |||
|ontology_enrichment_celltype=CL:0000738!1.55e-39!140;CL:0000766!3.53e-35!76;CL:0000557!1.94e-30!71;CL:0000037!2.67e-30!172;CL:0000566!2.67e-30!172;CL:0002009!1.52e-29!65;CL:0002087!2.18e-29!119;CL:0002031!4.47e-29!124;CL:0000988!6.43e-29!182;CL:0002032!1.88e-28!165;CL:0000837!1.88e-28!165;CL:0002194!2.29e-28!63;CL:0000576!2.29e-28!63;CL:0000040!2.29e-28!63;CL:0000559!2.29e-28!63;CL:0000839!3.02e-27!70;CL:0002057!7.12e-26!42;CL:0000763!3.94e-25!112;CL:0000049!3.94e-25!112;CL:0002320!2.34e-23!365;CL:0000134!7.61e-23!358;CL:0000860!8.08e-23!45;CL:0000048!1.45e-19!430;CL:0000034!6.44e-19!444;CL:0000723!8.02e-19!436;CL:0002371!2.60e-18!591;CL:0000219!1.69e-16!390;CL:0000144!2.67e-16!625;CL:0000003!1.72e-14!722;CL:0000063!3.73e-14!578;CL:0000012!1.08e-12!682;CL:0000548!7.47e-12!679;CL:0000004!7.47e-12!679;CL:0000255!7.47e-12!679;CL:0000451!9.81e-08!10;CL:0000990!7.07e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.80e-19;33!CL:0002057;2.80e-19;33!CL:0000473;1.18e-18;39!CL:0000234;1.18e-18;39!CL:0000576;2.09e-17;48!CL:0000766;3.58e-16;69!CL:0000738;3.19e-10;136!CL:0002087;6.64e-09;104!CL:0000451;9.72e-08;10!CL:0000763;2.80e-07;100!CL:0000990;7.03e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.00e-42,136;CL:0000766,1.18e-38,72;CL:0000557,1.01e-33,67;CL:0002009,5.45e-33,61;CL:0000037,5.70e-32,168;CL:0002194,8.58e-32,59;CL:0000576,8.58e-32,59;CL:0000040,8.58e-32,59;CL:0000559,8.58e-32,59;CL:0002087,1.58e-31,115;CL:0002031,3.90e-31,120;CL:0000988,1.03e-30,177;CL:0000839,2.69e-30,66;CL:0002032,4.22e-30,161;CL:0000837,4.22e-30,161;CL:0000473,8.44e-29,48;CL:0000234,8.44e-29,48;CL:0000763,3.95e-27,108;CL:0000049,3.95e-27,108;CL:0000860,7.12e-26,42;CL:0002057,7.12e-26,42;CL:0002320,3.33e-24,361;CL:0000134,1.09e-23,354;CL:0000048,4.34e-20,427;CL:0000034,2.00e-19,441;CL:0000723,2.48e-19,433;CL:0000219,3.63e-17,386;CL:0000451,9.81e-08,10;CL:0000990,7.07e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;8.88e-19;42!CL:0000049;7.06e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.41e-36!112;UBERON:0002390!2.48e-36!102;UBERON:0003061!2.48e-36!102;UBERON:0002371!1.61e-27!80;UBERON:0002405!1.06e-26!115;UBERON:0004765!2.20e-26!101;UBERON:0001434!2.20e-26!101;UBERON:0001474!3.85e-25!86;UBERON:0002384!1.38e-22!375;UBERON:0002204!2.76e-14!167;UBERON:0003081!1.57e-12!216;UBERON:0000178!7.33e-09!15;UBERON:0000179!7.33e-09!15;UBERON:0000463!7.33e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.44e-09;15!UBERON:0000179;7.44e-09;15!UBERON:0000463;7.44e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.80e-39,98;UBERON:0003061,3.80e-39,98;UBERON:0002193,5.80e-39,108;UBERON:0002405,6.80e-31,93;UBERON:0002371,2.76e-30,76;UBERON:0004765,5.89e-30,90;UBERON:0001434,2.71e-29,100;UBERON:0001474,1.40e-27,82;UBERON:0002384,2.10e-23,371;UBERON:0002204,1.17e-15,167;UBERON:0003081,1.64e-13,203;UBERON:0000926,1.43e-10,315;UBERON:0004120,1.43e-10,315;UBERON:0006603,1.43e-10,315;UBERON:0000178,7.33e-09,15;UBERON:0000179,7.33e-09,15;UBERON:0000463,7.33e-09,15 | |||
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| ||
|short_description=p1@CMTM6 | |||
}} | }} |
Latest revision as of 23:19, 17 September 2015
Short description: | p1@CMTM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CMTM6_5end |
Coexpression cluster: | C1246_Neutrophils_Eosinophils_CD14_migratory_Macrophage_Dendritic_Mast |
Association with transcript: | 0bp_to_ENST00000495177_5end |
EntrezGene: | CMTM6 |
HGNC: | 19177 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.00e-42 | 136 |
myeloid leukocyte | 1.18e-38 | 72 |
granulocyte monocyte progenitor cell | 1.01e-33 | 67 |
macrophage dendritic cell progenitor | 5.45e-33 | 61 |
hematopoietic stem cell | 5.70e-32 | 168 |
monopoietic cell | 8.58e-32 | 59 |
monocyte | 8.58e-32 | 59 |
monoblast | 8.58e-32 | 59 |
promonocyte | 8.58e-32 | 59 |
nongranular leukocyte | 1.58e-31 | 115 |
hematopoietic lineage restricted progenitor cell | 3.90e-31 | 120 |
hematopoietic cell | 1.03e-30 | 177 |
myeloid lineage restricted progenitor cell | 2.69e-30 | 66 |
hematopoietic oligopotent progenitor cell | 4.22e-30 | 161 |
hematopoietic multipotent progenitor cell | 4.22e-30 | 161 |
defensive cell | 8.44e-29 | 48 |
phagocyte | 8.44e-29 | 48 |
myeloid cell | 3.95e-27 | 108 |
common myeloid progenitor | 3.95e-27 | 108 |
classical monocyte | 7.12e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.12e-26 | 42 |
connective tissue cell | 3.33e-24 | 361 |
mesenchymal cell | 1.09e-23 | 354 |
multi fate stem cell | 4.34e-20 | 427 |
stem cell | 2.00e-19 | 441 |
somatic stem cell | 2.48e-19 | 433 |
motile cell | 3.63e-17 | 386 |
dendritic cell | 9.81e-08 | 10 |
conventional dendritic cell | 7.07e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.80e-39 | 98 |
blood island | 3.80e-39 | 98 |
hemolymphoid system | 5.80e-39 | 108 |
immune system | 6.80e-31 | 93 |
bone marrow | 2.76e-30 | 76 |
skeletal element | 5.89e-30 | 90 |
skeletal system | 2.71e-29 | 100 |
bone element | 1.40e-27 | 82 |
connective tissue | 2.10e-23 | 371 |
musculoskeletal system | 1.17e-15 | 167 |
lateral plate mesoderm | 1.64e-13 | 203 |
mesoderm | 1.43e-10 | 315 |
mesoderm-derived structure | 1.43e-10 | 315 |
presumptive mesoderm | 1.43e-10 | 315 |
blood | 7.33e-09 | 15 |
haemolymphatic fluid | 7.33e-09 | 15 |
organism substance | 7.33e-09 | 15 |