FFCP PHASE1:Hg19::chr6:32164161..32164208,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4855 | |EntrezGene=4855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7884 | |HGNC=7884 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-270bp_to_BC033869_5end | |association_with_transcript=-270bp_to_BC033869_5end | ||
|cluster_id=chr6:32164161..32164208,- | |||
|description=CAGE_peak_2_at_NOTCH4_5end | |description=CAGE_peak_2_at_NOTCH4_5end | ||
|id=chr6:32164161..32164208,- | |id=chr6:32164161..32164208,- | ||
|ontology_enrichment_celltype=CL:0002057!1.28e-22!42;CL:0000860!1.13e-19!45;CL:0000738!3.81e-15!140;CL:0002087!2.30e-14!119;CL:0000766!1.22e-13!76;CL:0002031!2.09e-12!124;CL:0002194!5.80e-11!63;CL:0000576!5.80e-11!63;CL:0000040!5.80e-11!63;CL:0000559!5.80e-11!63;CL:0002009!1.51e-10!65;CL:0000557!5.22e-10!71;CL:0000839!7.04e-10!70;CL:0000988!2.52e-09!182;CL:0000037!5.10e-09!172;CL:0000566!5.10e-09!172;CL:0000236!3.81e-08!14;CL:0002032!4.00e-08!165;CL:0000837!4.00e-08!165;CL:0000945!2.34e-07!24;CL:0000826!2.34e-07!24;CL:0002393!5.23e-07!9;CL:0002397!5.23e-07!9 | |ontology_enrichment_celltype=CL:0002057!1.28e-22!42;CL:0000860!1.13e-19!45;CL:0000738!3.81e-15!140;CL:0002087!2.30e-14!119;CL:0000766!1.22e-13!76;CL:0002031!2.09e-12!124;CL:0002194!5.80e-11!63;CL:0000576!5.80e-11!63;CL:0000040!5.80e-11!63;CL:0000559!5.80e-11!63;CL:0002009!1.51e-10!65;CL:0000557!5.22e-10!71;CL:0000839!7.04e-10!70;CL:0000988!2.52e-09!182;CL:0000037!5.10e-09!172;CL:0000566!5.10e-09!172;CL:0000236!3.81e-08!14;CL:0002032!4.00e-08!165;CL:0000837!4.00e-08!165;CL:0000945!2.34e-07!24;CL:0000826!2.34e-07!24;CL:0002393!5.23e-07!9;CL:0002397!5.23e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.12e-20;33!CL:0002057;1.12e-20;33!CL:0000576;1.56e-15;48!CL:0000473;2.63e-12;39!CL:0000234;2.63e-12;39!CL:0000766;2.71e-12;69!CL:0000236;1.60e-11;13!CL:0002087;2.45e-08;104!CL:0002393;2.34e-07;6!CL:0002397;2.34e-07;6!CL:0002139;3.63e-07;24!CL:0000094;4.21e-07;8!CL:0000945;5.16e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.58e-31,42;CL:0002057,5.58e-31,42;CL:0000473,3.59e-25,48;CL:0000234,3.59e-25,48;CL:0000766,9.84e-22,72;CL:0000738,1.15e-21,136;CL:0002087,4.30e-20,115;CL:0002031,5.31e-18,120;CL:0002194,3.21e-17,59;CL:0000576,3.21e-17,59;CL:0000040,3.21e-17,59;CL:0000559,3.21e-17,59;CL:0002009,3.23e-16,61;CL:0000839,7.79e-16,66;CL:0000557,2.15e-15,67;CL:0000988,1.14e-14,177;CL:0000037,1.43e-14,168;CL:0002032,7.18e-14,161;CL:0000837,7.18e-14,161;CL:0000236,1.49e-10,14;CL:0002393,2.10e-10,9;CL:0002397,2.10e-10,9;CL:0000763,5.22e-10,108;CL:0000049,5.22e-10,108;CL:0000115,7.30e-08,36;CL:0002139,2.07e-07,24;CL:0000094,3.83e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.47e-21;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.41e-14!115;UBERON:0002193!5.27e-12!112;UBERON:0003081!1.34e-10!216;UBERON:0002390!1.80e-10!102;UBERON:0003061!1.80e-10!102;UBERON:0002405!3.03e-10!115;UBERON:0001049!4.49e-10!57;UBERON:0005068!4.49e-10!57;UBERON:0006241!4.49e-10!57;UBERON:0007135!4.49e-10!57;UBERON:0001474!5.20e-10!86;UBERON:0002371!6.86e-10!80;UBERON:0002020!2.39e-09!34;UBERON:0003528!2.39e-09!34;UBERON:0001893!3.51e-09!34;UBERON:0001017!5.04e-09!82;UBERON:0002791!8.54e-09!33;UBERON:0005743!9.66e-09!86;UBERON:0001869!1.60e-08!32;UBERON:0004765!3.74e-08!101;UBERON:0001434!3.74e-08!101;UBERON:0003080!3.80e-08!42;UBERON:0002780!4.74e-08!41;UBERON:0001890!4.74e-08!41;UBERON:0006240!4.74e-08!41;UBERON:0000073!4.97e-08!94;UBERON:0001016!4.97e-08!94;UBERON:0002616!6.41e-08!59;UBERON:0000025!1.47e-07!194 | |ontology_enrichment_uberon=UBERON:0007023!6.41e-14!115;UBERON:0002193!5.27e-12!112;UBERON:0003081!1.34e-10!216;UBERON:0002390!1.80e-10!102;UBERON:0003061!1.80e-10!102;UBERON:0002405!3.03e-10!115;UBERON:0001049!4.49e-10!57;UBERON:0005068!4.49e-10!57;UBERON:0006241!4.49e-10!57;UBERON:0007135!4.49e-10!57;UBERON:0001474!5.20e-10!86;UBERON:0002371!6.86e-10!80;UBERON:0002020!2.39e-09!34;UBERON:0003528!2.39e-09!34;UBERON:0001893!3.51e-09!34;UBERON:0001017!5.04e-09!82;UBERON:0002791!8.54e-09!33;UBERON:0005743!9.66e-09!86;UBERON:0001869!1.60e-08!32;UBERON:0004765!3.74e-08!101;UBERON:0001434!3.74e-08!101;UBERON:0003080!3.80e-08!42;UBERON:0002780!4.74e-08!41;UBERON:0001890!4.74e-08!41;UBERON:0006240!4.74e-08!41;UBERON:0000073!4.97e-08!94;UBERON:0001016!4.97e-08!94;UBERON:0002616!6.41e-08!59;UBERON:0000025!1.47e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.76e-08;34!UBERON:0003528;7.69e-08;34!UBERON:0002020;7.69e-08;34!UBERON:0001869;1.94e-07;32!UBERON:0002791;1.98e-07;32 | |||
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|phase1_expression=0.363356758541113,0.214100523890983,0,0,0.446961094427288,0,0,0,0.261185628199839,0,1.39560233594486,0.218441372130172,0,0.247532705920093,0.994192127183747,0,1.20538905604795,0,0.487932798790507,0.61560529038394,0,0,1.14494394852423,0.410623275218653,0.502170558379211,1.14620108621927,1.06730766284929,1.02324015707783,5.50709987588466,4.22212337906934,6.50227717927519,0,0,0,0.619737604642413,0.284338464974843,3.52320527201817,3.32397245119126,2.60707781711184,5.20826089718044,0.223915474239924,0,0,1.16318591023652,3.02300754951048,4.60909716256851,1.62700325833979,4.52284676824008,5.26500830521676,1.7261543539329,3.07392847834921,4.96612682766029,1.37898272294647,3.22742341791913,10.8341189275473,1.88242339542605,4.09359225086769,6.96642801779762,3.06083892370903,3.85114832491312,8.95071976118658,0.659702600373432,1.99463657621632,2.98357325372886,0.870627715885752,3.40431134814684,6.22822248995575,0.75374599577023,2.60741459210101,3.47502151528187,1.81619850790011,3.31449872388808,5.69632297393592,3.16882929467913,2.97646019951061,4.61249020118427,1.12328631146495,1.95229960693958,0.803627933485401,4.27519115611873,4.37616689837998,3.65328307529268,3.51992488922645,4.91524750135918,4.44754626931777,5.9742231159311,2.40237592221607,1.72425731986345,3.30522436392431,3.81621501814146,14.2303242277362,12.3319809767897,9.93910393125595,6.60856642895129,2.24203425192614,0,0.590129310341499,1.57204305099666,1.23360899399706,0,0.651844533267181,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0,0,0,0,0,0.444859689486181,0,0,0,0.383220493601921,0.68725489096526,0.506039384039006,0.318565414324097,0,0,0.602300476311091,0.127986611154418,0,0,0,2.82249440514625,2.13952156626806,1.15859523106239,2.43806866313962,0,0.12786256184353,0,1.50401373190767,0.579386075843295,0,1.94653948121054,1.32348744029695,0.886917589850256,1.05401742831751,1.11332214173056,0,0,0,0,0.132957960518865,0.953962497221368,0.571994910780128,0.74291500265913,1.59009925893364,0,1.38856200643038,0.56530794192401,1.25849830862972,1.6507082516404,1.25396979922086,1.55050055501597,0,1.67360306382335,1.20848795132744,4.56163263431108,7.56592378399325,0.367663080345869,0.81014194788176,0.714397826272638,1.12264686313085,0.900891843866578,6.13266549863533,1.89853131913626,1.83201743930407,11.8602375692457,7.75560528296651,0,0,0.633152558322899,0.529636723252875,0.286836620748814,0,0,1.06748995729705,1.2333377420858,0.311211035399766,1.0776853765575,0.653847612453835,0.908144565869588,0,0.468642863667593,0,0,0.149448680551801,0.352303495931295,0.323745888736263,0,0.204154171254893,0.245668634623536,0.309977343527296,0,0,0,1.43723628363248,0.168336113954066,0.125118519871964,0,0.877955241761676,0.30648779579902,0.300476117813194,1.24775401476023,0.538168907066586,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0.252433774244115,0.184099797284599,0.323292113637624,1.06502877754984,0,0.508681776931463,0,0,0,0.365921118388786,0,0.116193942869518,0.725627385107593,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,1.4763109092493,2.80483547606892,0.4115740113314,0,0,1.96565443335525,0,0,0.122988438543114,0.343135620597051,0,0,0,0,0,0,0,1.04337364477569,0.117408694235822,3.46479474626577,1.85194205030644,1.33177906564219,0,0.858486162094873,0.246217006087397,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0.829312462163088,1.29707958075265,1.76739406796932,1.8414389344729,0.763976851116555,0,1.71072446022705,0.411309970813294,0.600686115687835,1.42913216315289,0.336393253036082,0.87192013766656,0.80672114403045,0.387815147273333,0,0.845302752556,0,2.08014873822732,0.514414748524284,1.41849132023278,0.266422179016099,0,0,0,0.325736184293735,1.06617584622764,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,4.92576900504818,3.88129634747131,6.41715181398742,2.28685161800217,1.30139853857622,0.773288812777695,1.67516265334349,1.27587750330633,2.24702107184155,0,1.65766205374414,0.736148950314839,1.00034104211935,0.271265023699736,0.207970861530807,0.356857977594324,0,0.35142424497814,0,0,2.0694614258501,0,0.184369168541703,0.173767228936166,0.587403472388222,0.343143423810856,0.620304078368662,3.01999881146064,3.842192080924,0,0,0.30239029332968,0.248107807818777,0.460385919864187,1.40330047216537,0.128139149255701,0,0,0,0.308419387605311,0.887808626565635,0.164254312027618,0.519254429183621,0.348631135379878,0,0.200506470303285,0,0.114814448164607,0.364182336013434,0.262248829918848,0,0.385076685522074,0,0,0,1.13733384070897,0.340187410553031,1.29549549661284,12.3381802152231,0.541892875087706,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.206082023295445,0.27470839445503,0.247528499761764,0,0,0,0.290012154876366,0,0.307007349452259,0.275673144969061,0.751941714077915,0.290033387828457,0.767039646744908,0.267096106940212,0,0.192190067365106,0,0.10115778085555,0,0,0,1.23213432070436,1.06461206063404,0,1.48259375283136,1.001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| ||
|short_description=p2@NOTCH4 | |short_description=p2@NOTCH4 | ||
}} | }} |
Latest revision as of 02:29, 18 September 2015
Short description: | p2@NOTCH4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NOTCH4_5end |
Coexpression cluster: | NA |
Association with transcript: | -270bp_to_BC033869_5end |
EntrezGene: | NOTCH4 |
HGNC: | 7884 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.58e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.58e-31 | 42 |
defensive cell | 3.59e-25 | 48 |
phagocyte | 3.59e-25 | 48 |
myeloid leukocyte | 9.84e-22 | 72 |
leukocyte | 1.15e-21 | 136 |
nongranular leukocyte | 4.30e-20 | 115 |
hematopoietic lineage restricted progenitor cell | 5.31e-18 | 120 |
monopoietic cell | 3.21e-17 | 59 |
monocyte | 3.21e-17 | 59 |
monoblast | 3.21e-17 | 59 |
promonocyte | 3.21e-17 | 59 |
macrophage dendritic cell progenitor | 3.23e-16 | 61 |
myeloid lineage restricted progenitor cell | 7.79e-16 | 66 |
granulocyte monocyte progenitor cell | 2.15e-15 | 67 |
hematopoietic cell | 1.14e-14 | 177 |
hematopoietic stem cell | 1.43e-14 | 168 |
hematopoietic oligopotent progenitor cell | 7.18e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.18e-14 | 161 |
B cell | 1.49e-10 | 14 |
intermediate monocyte | 2.10e-10 | 9 |
CD14-positive, CD16-positive monocyte | 2.10e-10 | 9 |
myeloid cell | 5.22e-10 | 108 |
common myeloid progenitor | 5.22e-10 | 108 |
endothelial cell | 7.30e-08 | 36 |
endothelial cell of vascular tree | 2.07e-07 | 24 |
granulocyte | 3.83e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
immune system | 1.46e-16 | 93 |
hemolymphoid system | 3.63e-16 | 108 |
bone marrow | 1.15e-14 | 76 |
bone element | 2.42e-14 | 82 |
lateral plate mesoderm | 7.61e-14 | 203 |
hematopoietic system | 1.22e-13 | 98 |
blood island | 1.22e-13 | 98 |
skeletal element | 2.37e-12 | 90 |
neural tube | 6.16e-11 | 56 |
neural rod | 6.16e-11 | 56 |
future spinal cord | 6.16e-11 | 56 |
neural keel | 6.16e-11 | 56 |
skeletal system | 2.10e-10 | 100 |
regional part of nervous system | 3.25e-10 | 53 |
regional part of brain | 3.25e-10 | 53 |
brain grey matter | 9.63e-10 | 34 |
gray matter | 9.63e-10 | 34 |
telencephalon | 1.60e-09 | 34 |
neural plate | 1.20e-08 | 82 |
presumptive neural plate | 1.20e-08 | 82 |
cerebral hemisphere | 1.46e-08 | 32 |
regional part of forebrain | 1.63e-08 | 41 |
forebrain | 1.63e-08 | 41 |
anterior neural tube | 1.63e-08 | 41 |
future forebrain | 1.63e-08 | 41 |
regional part of telencephalon | 1.76e-08 | 32 |
central nervous system | 2.22e-08 | 81 |
neurectoderm | 2.51e-08 | 86 |
adult organism | 4.72e-08 | 114 |
nervous system | 1.33e-07 | 89 |
tube | 2.70e-07 | 192 |
brain | 4.94e-07 | 68 |
future brain | 4.94e-07 | 68 |