FFCP PHASE1:Hg19::chr6:32411123..32411172,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3117 | |EntrezGene=3117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4942 | |HGNC=4942 | ||
|TSSclassifier=strong | |||
|UniProt=Q7YPT8 | |UniProt=Q7YPT8 | ||
|association_with_transcript=162bp_to_AF522250_5end | |association_with_transcript=162bp_to_AF522250_5end | ||
|cluster_id=chr6:32411123..32411172,+ | |||
|coexpression_cluster_id=C187 | |||
|description=CAGE_peak_3_at_HLA-DQA1_5end | |description=CAGE_peak_3_at_HLA-DQA1_5end | ||
|id=chr6:32411123..32411172,+ | |id=chr6:32411123..32411172,+ | ||
|ontology_enrichment_celltype=CL:0000738!5.38e-54!140;CL:0002087!2.42e-51!119;CL:0002031!1.04e-47!124;CL:0000037!1.18e-46!172;CL:0000566!1.18e-46!172;CL:0000988!1.24e-44!182;CL:0002032!3.38e-43!165;CL:0000837!3.38e-43!165;CL:0002009!3.52e-43!65;CL:0002194!4.41e-41!63;CL:0000576!4.41e-41!63;CL:0000040!4.41e-41!63;CL:0000559!4.41e-41!63;CL:0002057!6.19e-40!42;CL:0000557!9.70e-40!71;CL:0000839!7.99e-37!70;CL:0000766!4.96e-36!76;CL:0000860!5.94e-36!45;CL:0000763!5.37e-31!112;CL:0000049!5.37e-31!112;CL:0000945!2.33e-16!24;CL:0000826!2.33e-16!24;CL:0000236!1.62e-12!14;CL:0000451!1.75e-11!10;CL:0000542!8.13e-11!53;CL:0000051!8.13e-11!53;CL:0000838!2.24e-10!52;CL:0000990!3.40e-10!8;CL:0002393!1.24e-08!9;CL:0002397!1.24e-08!9;CL:0000134!5.89e-08!358;CL:0002320!3.13e-07!365;CL:0000840!3.50e-07!5;CL:0001029!3.50e-07!5 | |ontology_enrichment_celltype=CL:0000738!5.38e-54!140;CL:0002087!2.42e-51!119;CL:0002031!1.04e-47!124;CL:0000037!1.18e-46!172;CL:0000566!1.18e-46!172;CL:0000988!1.24e-44!182;CL:0002032!3.38e-43!165;CL:0000837!3.38e-43!165;CL:0002009!3.52e-43!65;CL:0002194!4.41e-41!63;CL:0000576!4.41e-41!63;CL:0000040!4.41e-41!63;CL:0000559!4.41e-41!63;CL:0002057!6.19e-40!42;CL:0000557!9.70e-40!71;CL:0000839!7.99e-37!70;CL:0000766!4.96e-36!76;CL:0000860!5.94e-36!45;CL:0000763!5.37e-31!112;CL:0000049!5.37e-31!112;CL:0000945!2.33e-16!24;CL:0000826!2.33e-16!24;CL:0000236!1.62e-12!14;CL:0000451!1.75e-11!10;CL:0000542!8.13e-11!53;CL:0000051!8.13e-11!53;CL:0000838!2.24e-10!52;CL:0000990!3.40e-10!8;CL:0002393!1.24e-08!9;CL:0002397!1.24e-08!9;CL:0000134!5.89e-08!358;CL:0002320!3.13e-07!365;CL:0000840!3.50e-07!5;CL:0001029!3.50e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.70e-45;33!CL:0002057;1.70e-45;33!CL:0000473;8.16e-45;39!CL:0000234;8.16e-45;39!CL:0000576;1.45e-38;48!CL:0000766;2.84e-25;69!CL:0002087;3.28e-19;104!CL:0000738;7.19e-19;136!CL:0000945;8.78e-18;24!CL:0000451;5.72e-17;10!CL:0000236;2.24e-15;13!CL:0000990;5.42e-15;8!CL:0000763;1.13e-12;100!CL:0000840;2.57e-10;5!CL:0000988;8.61e-10;177!CL:0000235;1.25e-09;6!CL:0000453;1.60e-09;5!CL:0002393;5.26e-09;6!CL:0002397;5.26e-09;6!CL:0000219;1.98e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.80e-75,61;CL:0000738,7.55e-74,136;CL:0002194,6.83e-72,59;CL:0000576,6.83e-72,59;CL:0000040,6.83e-72,59;CL:0000559,6.83e-72,59;CL:0002087,2.53e-71,115;CL:0000473,7.03e-70,48;CL:0000234,7.03e-70,48;CL:0000557,8.12e-67,67;CL:0002031,3.37e-66,120;CL:0000037,2.22e-63,168;CL:0000839,2.66e-62,66;CL:0000860,2.29e-61,42;CL:0002057,2.29e-61,42;CL:0000766,8.97e-60,72;CL:0002032,2.87e-59,161;CL:0000837,2.87e-59,161;CL:0000988,1.09e-58,177;CL:0000763,3.16e-50,108;CL:0000049,3.16e-50,108;CL:0000945,9.29e-18,24;CL:0000826,9.29e-18,24;CL:0000451,5.68e-17,10;CL:0000236,1.50e-16,14;CL:0000134,3.67e-16,354;CL:0002320,2.42e-15,361;CL:0000990,5.72e-15,8;CL:0002393,1.52e-12,9;CL:0002397,1.52e-12,9;CL:0000219,1.69e-12,386;CL:0000840,2.66e-10,5;CL:0001029,2.66e-10,5;CL:0000235,1.36e-09,6;CL:0000453,1.62e-09,5;CL:0000034,2.30e-09,441;CL:0000542,2.96e-09,53;CL:0000051,2.96e-09,53;CL:0000048,3.92e-09,427;CL:0000838,1.05e-08,52;CL:0000723,1.11e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;6.91e-44;42!CL:0000049;3.33e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.04e-47!102;UBERON:0003061!8.04e-47!102;UBERON:0002193!2.13e-42!112;UBERON:0002371!5.30e-36!80;UBERON:0001474!9.25e-33!86;UBERON:0002405!1.74e-26!115;UBERON:0004765!5.09e-25!101;UBERON:0001434!5.09e-25!101;UBERON:0007023!9.61e-24!115;UBERON:0003081!8.32e-13!216;UBERON:0000178!9.88e-10!15;UBERON:0000179!9.88e-10!15;UBERON:0000463!9.88e-10!15;UBERON:0002204!2.78e-09!167;UBERON:0002384!7.75e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.72e-64,98;UBERON:0003061,8.72e-64,98;UBERON:0002193,2.30e-59,108;UBERON:0002371,1.53e-58,76;UBERON:0002405,1.13e-54,93;UBERON:0001474,7.88e-53,82;UBERON:0004765,2.10e-46,90;UBERON:0001434,7.87e-40,100;UBERON:0003081,1.04e-23,203;UBERON:0002204,4.11e-18,167;UBERON:0002384,8.16e-15,371;UBERON:0000926,8.08e-10,315;UBERON:0004120,8.08e-10,315;UBERON:0006603,8.08e-10,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,2.06316195519468,2.38091709404843,1.49550484495991,0.393364276848904,1.91914699048606,2.01260960310899,0,0,0,0.309868802321207,0.853015394924529,1.17440175733939,2.21598163412751,3.60980005446255,3.03815219002193,8.2848725468772,14.8991086368731,7.7272670290256,12.9404432513813,17.3822934096852,8.73302620276138,14.4106002881524,9.04569353648017,13.6270803193846,10.6446185159196,14.6011602721587,10.4052181150977,23.0979606093534,39.3745656986134,60.9419189674538,16.7535682192918,31.1113011065944,18.2026022400519,48.3612549946026,67.7160247130558,67.1303982088993,7.58657990429447,20.5447567350281,17.0489900213078,17.1223450790865,11.9150897185139,18.6846674698673,9.04495194924276,15.1230046341858,9.33912032232002,18.7673845816344,9.57521853567668,10.7597211729901,11.6190407471568,13.3940708977977,7.96702852931828,5.05478840159228,6.00707571366025,3.2145117339416,3.70516566863623,5.9675003159727,4.93193215164512,3.51992488922645,6.00752472388345,9.7846017924991,10.6682555641627,12.0118796110804,6.8970292794538,11.8988077101275,13.3567525634951,7.39976859842283,7.04684627245127,5.73409842187843,1.32171328579026,2.24203425192614,2.10707267820062,0,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0.25618263945135,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.451725357233318,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37528029272598,0,0,13.9555379271514,11.1443031871531,20.4755259199052,3.10037811596945,2.28797964312051,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17055712783534,3.04205544681009,7.72882043901387,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.378615870531,10.0451418286425,33.7334303172851,0,0,0,0,0,0,0,0,0.215627574859517,0.641715181398742,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,6.25571182373989,2.24127871387233,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75169719801128,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07116361708914,0,0,0,0,1.52234282769651,1.52927441428475,0.569647187174163,1.19115887728894,0.822724546172388,1.94541993357815,1.08006287447623,1.58625035258854,0,0,0,1.11481905075431,0.432807638929335,0,0,0,2.10655907145603,0,0,2.24637742490767,0.228234679033192,0,0,1.18504244461122,0,1.41259795033733,2.98092366383228,0.343505344755765,0,0,0,0.976940477010201,0,0,0,0,0,0,2.19762268907841,0,4.79206552393157,0.568272293612826,0,0,0,0,0,0,1.31843099381408,0,1.59398390600856,4.42054264849836,0,0,0.861593638227486,0,0,0,0,0.591860433821602,11.974154617347,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0,0,0.658156191461918,0,0,0.384751292518985,0,0,0,0,0,0.0915975934018623,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76915129006678,2.4441205797345,0.593042257361244,0.86494757262552,0.417687798021821,0.067401132980677,0,0.234264445725339,2.73682183823499,0,0,0.789168805698781,1.20990716048664,0,1.32691817219825,0,0,0,0,0,0,0,0.138674673013139,0,0,0,4.19344003780872,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0.0633107959558787,0,0.0801588202515337,2.98834192635094,0,0,0,0,0.432164393964449,0,0.235694034616795,0,0,0,0,0,0.273810757783986,0,0.429765441419957,2.10309883423452,0.558564802544508,0,0.717873024576814,0.199679000498991,0.429226048136571,0.89268582976749,0.134366944973453,0,0,0,0,0,0,1.27009998098677,0.795229689809303,0.136203406111576,0,0,0,21.147545805841,34.8210879551077,0.0607495566580247,0,0.945668487590378,0,0,0,0,2.1440859791201,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0.58620893471233,0,0.129282956361551,0.39669780522807,0,0,5.01900839068165,1.10043013569766,14.4983669371518,6.45015828355536,0,2.07047417247523,0,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0,0.998361463831671,0.310482014706917,0,0,0.151649117541648,0,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,34.4902746645718,16.2095105182303,24.3712437441208,0,0,0,4.79969750051832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0,0.127762427639595,0.535701835878287,1.00885116665647,0,0.227662191351298,0.354809480650555,3.11131766400604,0.171488009437418,0,0.131545547125698,0,0,0.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| ||
|short_description=p3@HLA-DQA1 | |short_description=p3@HLA-DQA1 | ||
}} | }} |
Latest revision as of 02:56, 18 September 2015
Short description: | p3@HLA-DQA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HLA-DQA1_5end |
Coexpression cluster: | C187_migratory_immature_Dendritic_CD19_CD14_Monocytederived_Macrophage |
Association with transcript: | 162bp_to_AF522250_5end |
EntrezGene: | HLA-DQA1 |
HGNC: | 4942 |
UniProt: | Q7YPT8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.72e-64 | 98 |
blood island | 8.72e-64 | 98 |
hemolymphoid system | 2.30e-59 | 108 |
bone marrow | 1.53e-58 | 76 |
immune system | 1.13e-54 | 93 |
bone element | 7.88e-53 | 82 |
skeletal element | 2.10e-46 | 90 |
skeletal system | 7.87e-40 | 100 |
lateral plate mesoderm | 1.04e-23 | 203 |
musculoskeletal system | 4.11e-18 | 167 |
connective tissue | 8.16e-15 | 371 |
mesoderm | 8.08e-10 | 315 |
mesoderm-derived structure | 8.08e-10 | 315 |
presumptive mesoderm | 8.08e-10 | 315 |